RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 NAALADL2Q58DX5 795 aa11.26□□□□□ -0.61
TCOF1-204ENST00000427724 ZNF280DQ6N043 979 aa11.26□□□□□ -0.61
TCOF1-204ENST00000427724 CAPN12Q6ZSI9 719 aa11.26□□□□□ -0.61
TCOF1-204ENST00000427724 CCDC60Q8IWA6 550 aaPredicted RBP11.26□□□□□ -0.61
TCOF1-204ENST00000427724 WHAMMQ8TF30 809 aa11.26□□□□□ -0.61
TCOF1-204ENST00000427724 DNAJC7Q99615 494 aa11.26□□□□□ -0.61
TCOF1-204ENST00000427724 C11orf70Q9BRQ4 267 aa11.26□□□□□ -0.61
TCOF1-204ENST00000427724 YIPF3Q9GZM5 350 aa11.26□□□□□ -0.61
TCOF1-204ENST00000427724 TRPV6Q9H1D0 765 aa11.26□□□□□ -0.61
TCOF1-204ENST00000427724 VIPAS39Q9H9C1 493 aa11.26□□□□□ -0.61
TCOF1-204ENST00000427724 DMGDHQ9UI17 866 aaKnown RBP11.26□□□□□ -0.61
TCOF1-204ENST00000427724 PTPN22Q9Y2R2 807 aa11.26□□□□□ -0.61
TCOF1-204ENST00000427724 NOC2LQ9Y3T9 749 aaKnown RBP11.26□□□□□ -0.61
TCOF1-204ENST00000427724 OGTO15294 1046 aa11.26□□□□□ -0.61
TCOF1-204ENST00000427724 ODC1P11926 461 aa11.26□□□□□ -0.61
TCOF1-204ENST00000427724 SCP2P22307 547 aa11.26□□□□□ -0.61
TCOF1-204ENST00000427724 GNL1P36915 607 aaPredicted RBP11.26□□□□□ -0.61
TCOF1-204ENST00000427724 RTP1P59025 263 aa11.26□□□□□ -0.61
TCOF1-204ENST00000427724 RINT1Q6NUQ1 792 aa11.26□□□□□ -0.61
TCOF1-204ENST00000427724 THOC1Q96FV9 657 aaKnown RBP11.26□□□□□ -0.61
TCOF1-204ENST00000427724 GOLPH3Q9H4A6 298 aa11.26□□□□□ -0.61
TCOF1-204ENST00000427724 TLE6Q9H808 572 aa11.26□□□□□ -0.61
TCOF1-204ENST00000427724 SH3BP5O60239 455 aa11.26□□□□□ -0.61
TCOF1-204ENST00000427724 UBE4BO95155 1302 aa11.26□□□□□ -0.61
TCOF1-204ENST00000427724 NPTX2P47972 431 aa11.26□□□□□ -0.61
TCOF1-204ENST00000427724 ACLYP53396 1101 aa11.26□□□□□ -0.61
TCOF1-204ENST00000427724 MXRA7P84157 204 aa11.26□□□□□ -0.61
TCOF1-204ENST00000427724 SH3RF1Q7Z6J0 888 aa11.26□□□□□ -0.61
TCOF1-204ENST00000427724 VSIG1Q86XK7 387 aa11.26□□□□□ -0.61
TCOF1-204ENST00000427724 CELF4Q9BZC1 486 aaKnown RBP11.26□□□□□ -0.61
TCOF1-204ENST00000427724 SYNPO2Q9UMS6 1093 aa11.26□□□□□ -0.61
TCOF1-204ENST00000427724 FAM50BQ9Y247 325 aa11.26□□□□□ -0.61
TCOF1-204ENST00000427724 GOLGA4Q13439 2230 aaKnown RBP11.25□□□□□ -0.61
TCOF1-204ENST00000427724 TTLL13PA6NNM8 815 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 CREB3O43889 395 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 ATP9AO75110 1047 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 SMIM24O75264 130 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 SLCO1A2P46721 670 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 RAB27AP51159 221 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 RAD51Q06609 339 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 OTOP1Q7RTM1 612 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 RNF10Q8N5U6 811 aaKnown RBP11.25□□□□□ -0.61
TCOF1-204ENST00000427724 HAUS1Q96CS2 278 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 POLR3CQ9BUI4 534 aaPredicted RBP11.25□□□□□ -0.61
TCOF1-204ENST00000427724 CCDC68Q9H2F9 335 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 TXNRD2Q9NNW7 524 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 UBN1Q9NPG3 1134 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 TPX2Q9ULW0 747 aaKnown RBP11.25□□□□□ -0.61
TCOF1-204ENST00000427724 DAAM1Q9Y4D1 1078 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 PRRC2BQ5JSZ5 2229 aaKnown RBP11.25□□□□□ -0.61
TCOF1-204ENST00000427724 LRRD1A4D1F6 860 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 CYB561D2O14569 222 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 MAP3K13O43283 966 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 TOM1L1O75674 476 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 FGGP02679 453 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 SELPP16109 830 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 TBXAS1P24557 533 aaPredicted RBP11.25□□□□□ -0.61
TCOF1-204ENST00000427724 NAMPTP43490 491 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 SEC24CP53992 1094 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 MRPS6P82932 125 aaKnown RBP11.25□□□□□ -0.61
TCOF1-204ENST00000427724 ZKSCAN8Q15776 578 aaPredicted RBP11.25□□□□□ -0.61
TCOF1-204ENST00000427724 C10orf120Q5SQS8 335 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 MIB1Q86YT6 1006 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 KBTBD4Q9NVX7 518 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 HES2Q9Y543 173 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 LTN1O94822 1766 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 IRS2Q9Y4H2 1338 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 CCDC160A6NGH7 325 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 RNF225M0QZC1 329 aaPredicted RBP11.25□□□□□ -0.61
TCOF1-204ENST00000427724 ACO1P21399 889 aaKnown RBP11.25□□□□□ -0.61
TCOF1-204ENST00000427724 SDC4P31431 198 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 CARSP49589 748 aaKnown RBP11.25□□□□□ -0.61
TCOF1-204ENST00000427724 EPHB3P54753 998 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 NR1H3Q13133 447 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 GLE1Q53GS7 698 aaKnown RBP11.25□□□□□ -0.61
TCOF1-204ENST00000427724 PPP2R2DQ66LE6 453 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 WDR93Q6P2C0 686 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 ZNF449Q6P9G9 518 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 C4orf19Q8IY42 314 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 PBKQ96KB5 322 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 RUSC1Q9BVN2 902 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 TRMT13Q9NUP7 481 aaKnown RBP11.25□□□□□ -0.61
TCOF1-204ENST00000427724 NKIRAS1Q9NYS0 192 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 ZNF148Q9UQR1 794 aa11.25□□□□□ -0.61
TCOF1-204ENST00000427724 FAM47DPA6NHR8 397 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 GOLGA8CPA6NN73 597 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 ENO4A6NNW6 628 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 NFKBIAP25963 317 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 GNA15P30679 374 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 AP3M2P53677 418 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 PSMC1P62191 440 aaKnown RBP11.24□□□□□ -0.61
TCOF1-204ENST00000427724 PPM1LQ5SGD2 360 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 NOL9Q5SY16 702 aaKnown RBP11.24□□□□□ -0.61
TCOF1-204ENST00000427724 ZNF697Q5TEC3 545 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 TTC39CQ8N584 583 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 CCDC197Q8NCU1 140 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 ZWILCHQ9H900 591 aa11.24□□□□□ -0.61
TCOF1-204ENST00000427724 ACTR5Q9H9F9 607 aaPredicted RBP11.24□□□□□ -0.61
TCOF1-204ENST00000427724 MRPL47Q9HD33 250 aaKnown RBP11.24□□□□□ -0.61
TCOF1-204ENST00000427724 DPP3Q9NY33 737 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms