RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 MTHFD1LQ6UB35 978 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 AGGF1Q8N302 714 aaeCLIP13.14□□□□□ -0.312e-9■■■■■ 27.3
HDLBP-214ENST00000427183 C10orf53Q8N6V4 93 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 C10orf88Q9H8K7 445 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 PITPNM2Q9BZ72 1349 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 ZC3H4Q9UPT8 1303 aaKnown RBP13.14□□□□□ -0.31
HDLBP-214ENST00000427183 CIAO1O76071 339 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 TBXAS1P24557 533 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-214ENST00000427183 DMPKQ09013 629 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 ARHGEF6Q15052 776 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 DAB2IPQ5VWQ8 1189 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 URGCPQ8TCY9 931 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 GLMNQ92990 594 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 WDR24Q96S15 920 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 PLEKHA5Q9HAU0 1116 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 RAB6BQ9NRW1 208 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 SMARCAL1Q9NZC9 954 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 PRAMEF22A3QJZ6 481 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 STRNO43815 780 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 CDC27P30260 824 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 RGS7P49802 495 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 DHX34Q14147 1143 aaKnown RBP13.14□□□□□ -0.31
HDLBP-214ENST00000427183 CPA5Q8WXQ8 436 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 POLR3FQ9H1D9 316 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-214ENST00000427183 ALBP02768 609 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 SCP2P22307 547 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 ARL4DP49703 201 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 FAM160B2Q86V87 743 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 DGKHQ86XP1 1220 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 DDHD1Q8NEL9 900 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 KIF12Q96FN5 646 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 KIAA1586Q9HCI6 787 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 CNGB3Q9NQW8 809 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 ZC3H7BQ9UGR2 993 aaKnown RBP13.14□□□□□ -0.31
HDLBP-214ENST00000427183 MORC2Q9Y6X9 1032 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-214ENST00000427183 NDUFS3O75489 264 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 GRIK1P39086 918 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 TRADDQ15628 312 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 PCYOX1LQ8NBM8 494 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 ASAP3Q8TDY4 903 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 IRX2Q9BZI1 471 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-214ENST00000427183 CD248Q9HCU0 757 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 GABBR1Q9UBS5 961 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 SPATA2Q9UM82 520 aa13.14□□□□□ -0.31
HDLBP-214ENST00000427183 FAM196BA6NMK8 535 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 USP1O94782 785 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 DDX5P17844 614 aaKnown RBP13.13□□□□□ -0.31
HDLBP-214ENST00000427183 TP53BP2Q13625 1128 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 OR8H2Q8N162 312 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 PROM2Q8N271 834 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 VMP1Q96GC9 406 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 RBM15Q96T37 977 aaKnown RBP eCLIP13.13□□□□□ -0.315e-7■□□□□ 10.6
HDLBP-214ENST00000427183 ZFYVE1Q9HBF4 777 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 ZNF302Q9NR11 478 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 ASAP1Q9ULH1 1129 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 ERBB4Q15303 1308 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 IGF2BP3O00425 579 aaKnown RBP eCLIP13.13□□□□□ -0.312e-6■■■□□ 17.3
HDLBP-214ENST00000427183 NMT2O60551 498 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 PARNO95453 639 aaKnown RBP13.13□□□□□ -0.31
HDLBP-214ENST00000427183 AKR1B1P15121 316 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 ATP12AP54707 1039 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 GTF2H3Q13889 308 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 TXNRD1Q16881 649 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 MEI1Q5TIA1 1274 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 ZBTB10Q96DT7 871 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 KLHL31Q9H511 634 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 RBAKQ9NYW8 714 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-214ENST00000427183 RSPH10B2B2RC85 870 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 RSPH10BP0C881 870 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 FCER1AP12319 257 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.13□□□□□ -0.31
HDLBP-214ENST00000427183 TRPM8Q7Z2W7 1104 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 HS6ST3Q8IZP7 471 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 FHDC1Q9C0D6 1143 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-214ENST00000427183 ADAMTS13Q76LX8 1427 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 SKIV2LQ15477 1246 aaKnown RBP13.13□□□□□ -0.31
HDLBP-214ENST00000427183 WLSQ5T9L3 541 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 TMC5Q6UXY8 1006 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 MCPH1Q8NEM0 835 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 ATL2Q8NHH9 583 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 SH3RF3Q8TEJ3 882 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-214ENST00000427183 PSD3Q9NYI0 1048 aa13.13□□□□□ -0.31
HDLBP-214ENST00000427183 C3orf70A6NLC5 250 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-214ENST00000427183 HNRNPRO43390 633 aaKnown RBP13.12□□□□□ -0.31
HDLBP-214ENST00000427183 AGTP01019 485 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 MYBL1P10243 752 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 PYGMP11217 842 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 PTK7Q13308 1070 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 BFSP2Q13515 415 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 GINS4Q9BRT9 223 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 IMPAD1Q9NX62 359 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 ATP10DQ9P241 1426 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 NPHP3-ACAD11A0A0J9YXS1 232 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 FOXN1O15353 648 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 HPCAP84074 193 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 SLC44A2Q8IWA5 706 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-214ENST00000427183 RFFLQ8WZ73 363 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 TADA1Q96BN2 335 aa13.12□□□□□ -0.31
HDLBP-214ENST00000427183 PABPC5Q96DU9 382 aaKnown RBP13.12□□□□□ -0.31
HDLBP-214ENST00000427183 DHX36Q9H2U1 1008 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms