RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 COL9A3Q14050 684 aaPredicted RBP20.72■□□□□ 0.91
HCG18-235ENST00000426882 OR6P1Q8NGX9 317 aa20.72■□□□□ 0.91
HCG18-235ENST00000426882 SUDS3Q9H7L9 328 aaPredicted RBP20.72■□□□□ 0.91
HCG18-235ENST00000426882 NPHS2Q9NP85 383 aa20.72■□□□□ 0.91
HCG18-235ENST00000426882 SPDYE2BA6NHP3 402 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 H3BQF6 201 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 MAGEB2O15479 319 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 SPDYE6P0CI01 402 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 SHMT1P34896 483 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 CUL2Q13617 745 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 C3orf62Q6ZUJ4 267 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 AGBL3Q8NEM8 1001 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 OR6J1Q8NGC5 347 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 AGAP3Q96P47 875 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 MORF4L2Q15014 288 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 ARHGEF6Q15052 776 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 RGS9BPQ6ZS82 235 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 TRPM8Q7Z2W7 1104 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 C1orf131Q8NDD1 294 aaKnown RBP20.71■□□□□ 0.91
HCG18-235ENST00000426882 GMCL1P1Q8NEA9 526 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 KLF6Q99612 283 aaPredicted RBP20.71■□□□□ 0.91
HCG18-235ENST00000426882 NUDT12Q9BQG2 462 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 TSSK1BQ9BXA7 367 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 FAM49BQ9NUQ9 324 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 TMX2Q9Y320 296 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 CYTH3O43739 400 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 PDGFRBP09619 1106 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 ZNF200P98182 395 aaPredicted RBP20.71■□□□□ 0.91
HCG18-235ENST00000426882 AGR3Q8TD06 166 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 NT5C1AQ9BXI3 368 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 CSPG5O95196 566 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 IL18RAPO95256 599 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 NPTX2P47972 431 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 C2CD6Q53TS8 623 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 KDM7AQ6ZMT4 941 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 SH3RF1Q7Z6J0 888 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 CDR2LQ86X02 465 aaPredicted RBP20.71■□□□□ 0.91
HCG18-235ENST00000426882 PDCD6IPQ8WUM4 868 aaKnown RBP20.71■□□□□ 0.91
HCG18-235ENST00000426882 PPCSQ9HAB8 311 aa20.71■□□□□ 0.91
HCG18-235ENST00000426882 ABT1Q9ULW3 272 aaKnown RBP20.71■□□□□ 0.91
HCG18-235ENST00000426882 PPARGP37231 505 aaPredicted RBP20.7■□□□□ 0.9
HCG18-235ENST00000426882 SULT1E1P49888 294 aa20.7■□□□□ 0.9
HCG18-235ENST00000426882 TPI1P60174 286 aa20.7■□□□□ 0.9
HCG18-235ENST00000426882 SEZ6Q53EL9 994 aa20.7■□□□□ 0.9
HCG18-235ENST00000426882 MEI1Q5TIA1 1274 aa20.7■□□□□ 0.9
HCG18-235ENST00000426882 RFX8Q6ZV50 586 aa20.7■□□□□ 0.9
HCG18-235ENST00000426882 DNAAF5Q86Y56 855 aa20.7■□□□□ 0.9
HCG18-235ENST00000426882 CHST13Q8NET6 341 aa20.7■□□□□ 0.9
HCG18-235ENST00000426882 ACTRT1Q8TDG2 376 aa20.7■□□□□ 0.9
HCG18-235ENST00000426882 CCDC138Q96M89 665 aa20.7■□□□□ 0.9
HCG18-235ENST00000426882 RSAD1Q9HA92 442 aa20.7■□□□□ 0.9
HCG18-235ENST00000426882 PPFIA2O75334 1257 aa20.7■□□□□ 0.9
HCG18-235ENST00000426882 CYP11B1P15538 503 aa20.7■□□□□ 0.9
HCG18-235ENST00000426882 PRAMEP78395 509 aa20.7■□□□□ 0.9
HCG18-235ENST00000426882 EPAS1Q99814 870 aa20.7■□□□□ 0.9
HCG18-235ENST00000426882 PRMT7Q9NVM4 692 aaPredicted RBP20.7■□□□□ 0.9
HCG18-235ENST00000426882 ORC6Q9Y5N6 252 aa20.7■□□□□ 0.9
HCG18-235ENST00000426882 FAM237AA0A1B0GTK4 181 aa20.7■□□□□ 0.9
HCG18-235ENST00000426882 RARBP10826 455 aa20.7■□□□□ 0.9
HCG18-235ENST00000426882 HABP4Q5JVS0 413 aaKnown RBP20.7■□□□□ 0.9
HCG18-235ENST00000426882 CYP4A22Q5TCH4 519 aa20.7■□□□□ 0.9
HCG18-235ENST00000426882 ATG4AQ8WYN0 398 aa20.7■□□□□ 0.9
HCG18-235ENST00000426882 OLFML3Q9NRN5 406 aa20.7■□□□□ 0.9
HCG18-235ENST00000426882 MYCP01106 439 aaPredicted RBP20.7■□□□□ 0.9
HCG18-235ENST00000426882 EEF1B2P24534 225 aaKnown RBP20.7■□□□□ 0.9
HCG18-235ENST00000426882 AP2B1P63010 937 aa20.7■□□□□ 0.9
HCG18-235ENST00000426882 FASTKD1Q53R41 847 aaKnown RBP20.7■□□□□ 0.9
HCG18-235ENST00000426882 EFCAB12Q6NXP0 572 aa20.7■□□□□ 0.9
HCG18-235ENST00000426882 APPL2Q8NEU8 664 aa20.7■□□□□ 0.9
HCG18-235ENST00000426882 ERP27Q96DN0 273 aa20.7■□□□□ 0.9
HCG18-235ENST00000426882 SMIM22K7EJ46 135 aa20.69■□□□□ 0.9
HCG18-235ENST00000426882 DPEP1P16444 411 aa20.69■□□□□ 0.9
HCG18-235ENST00000426882 NSUN2Q08J23 767 aaKnown RBP eCLIP20.69■□□□□ 0.9
HCG18-235ENST00000426882 BTBD8Q5XKL5 378 aa20.69■□□□□ 0.9
HCG18-235ENST00000426882 RNF135Q8IUD6 432 aa20.69■□□□□ 0.9
HCG18-235ENST00000426882 NDE1Q9NXR1 346 aa20.69■□□□□ 0.9
HCG18-235ENST00000426882 ACSF2Q96CM8 615 aaPredicted RBP20.69■□□□□ 0.9
HCG18-235ENST00000426882 CCDC124Q96CT7 223 aaKnown RBP20.69■□□□□ 0.9
HCG18-235ENST00000426882 PAK5Q9P286 719 aa20.69■□□□□ 0.9
HCG18-235ENST00000426882 COL5A2P05997 1499 aaPredicted RBP20.69■□□□□ 0.9
HCG18-235ENST00000426882 GZMAP12544 262 aa20.69■□□□□ 0.9
HCG18-235ENST00000426882 PGM1P36871 562 aa20.69■□□□□ 0.9
HCG18-235ENST00000426882 UBA3Q8TBC4 463 aa20.69■□□□□ 0.9
HCG18-235ENST00000426882 ATP8B4Q8TF62 1192 aa20.69■□□□□ 0.9
HCG18-235ENST00000426882 CLMNQ96JQ2 1002 aa20.69■□□□□ 0.9
HCG18-235ENST00000426882 BLOC1S4Q9NUP1 217 aa20.69■□□□□ 0.9
HCG18-235ENST00000426882 GH1P01241 217 aa20.69■□□□□ 0.9
HCG18-235ENST00000426882 GLI1P08151 1106 aa20.69■□□□□ 0.9
HCG18-235ENST00000426882 HSD17B4P51659 736 aa20.69■□□□□ 0.9
HCG18-235ENST00000426882 KDSRQ06136 332 aa20.69■□□□□ 0.9
HCG18-235ENST00000426882 PTK7Q13308 1070 aa20.69■□□□□ 0.9
HCG18-235ENST00000426882 SLC30A10Q6XR72 485 aa20.69■□□□□ 0.9
HCG18-235ENST00000426882 TRIML2Q8N7C3 387 aa20.69■□□□□ 0.9
HCG18-235ENST00000426882 CDC26Q8NHZ8 85 aa20.69■□□□□ 0.9
HCG18-235ENST00000426882 CYP2W1Q8TAV3 490 aa20.69■□□□□ 0.9
HCG18-235ENST00000426882 RANBP17Q9H2T7 1088 aaKnown RBP20.69■□□□□ 0.9
HCG18-235ENST00000426882 PLEKHA5Q9HAU0 1116 aa20.69■□□□□ 0.9
HCG18-235ENST00000426882 SP110Q9HB58 689 aa20.68■□□□□ 0.9
HCG18-235ENST00000426882 ANLNQ9NQW6 1124 aa20.68■□□□□ 0.9
HCG18-235ENST00000426882 GTPBP10A4D1E9 387 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms