RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 GPR88Q9GZN0 384 aa14.19□□□□□ -0.14
USP42-203ENST00000426246 UBIAD1Q9Y5Z9 338 aa14.19□□□□□ -0.14
USP42-203ENST00000426246 PODXLO00592 558 aa14.19□□□□□ -0.14
USP42-203ENST00000426246 CPA2P48052 419 aa14.19□□□□□ -0.14
USP42-203ENST00000426246 SLC20A2Q08357 652 aa14.19□□□□□ -0.14
USP42-203ENST00000426246 POLR3FQ9H1D9 316 aaPredicted RBP14.19□□□□□ -0.14
USP42-203ENST00000426246 RNF146Q9NTX7 359 aa14.19□□□□□ -0.14
USP42-203ENST00000426246 TBX20Q9UMR3 447 aa14.19□□□□□ -0.14
USP42-203ENST00000426246 LOXHD1Q8IVV2 1947 aa14.18□□□□□ -0.14
USP42-203ENST00000426246 CCDC195A0A1B0GUA6 201 aa14.18□□□□□ -0.14
USP42-203ENST00000426246 MIF4GDA9UHW6 222 aaKnown RBP14.18□□□□□ -0.14
USP42-203ENST00000426246 K7ERI5 159 aa14.18□□□□□ -0.14
USP42-203ENST00000426246 BRD2P25440 801 aaKnown RBP14.18□□□□□ -0.14
USP42-203ENST00000426246 MREGQ8N565 214 aa14.18□□□□□ -0.14
USP42-203ENST00000426246 ERP27Q96DN0 273 aa14.18□□□□□ -0.14
USP42-203ENST00000426246 STMN4Q9H169 189 aaPredicted RBP14.18□□□□□ -0.14
USP42-203ENST00000426246 GRHL1Q9NZI5 618 aa14.18□□□□□ -0.14
USP42-203ENST00000426246 HAO1Q9UJM8 370 aa14.18□□□□□ -0.14
USP42-203ENST00000426246 AGAP1Q9UPQ3 857 aa14.18□□□□□ -0.14
USP42-203ENST00000426246 UMODL1Q5DID0 1318 aa14.18□□□□□ -0.14
USP42-203ENST00000426246 LRRC37A2A6NM11 1700 aa14.18□□□□□ -0.14
USP42-203ENST00000426246 CHRNB2P17787 502 aa14.18□□□□□ -0.14
USP42-203ENST00000426246 PDIA2Q13087 525 aaKnown RBP14.18□□□□□ -0.14
USP42-203ENST00000426246 DHX34Q14147 1143 aaKnown RBP14.18□□□□□ -0.14
USP42-203ENST00000426246 PGM5Q15124 567 aa14.18□□□□□ -0.14
USP42-203ENST00000426246 CCDC6Q16204 474 aa14.18□□□□□ -0.14
USP42-203ENST00000426246 SULF1Q8IWU6 871 aa14.18□□□□□ -0.14
USP42-203ENST00000426246 CNPY4Q8N129 248 aa14.18□□□□□ -0.14
USP42-203ENST00000426246 LRRC71Q8N4P6 559 aa14.18□□□□□ -0.14
USP42-203ENST00000426246 NSMCE1Q8WV22 266 aa14.18□□□□□ -0.14
USP42-203ENST00000426246 NLRP4Q96MN2 994 aa14.18□□□□□ -0.14
USP42-203ENST00000426246 MSTO1Q9BUK6 570 aa14.18□□□□□ -0.14
USP42-203ENST00000426246 CNOT10Q9H9A5 744 aaKnown RBP14.18□□□□□ -0.14
USP42-203ENST00000426246 MARCOQ9UEW3 520 aaPredicted RBP14.18□□□□□ -0.14
USP42-203ENST00000426246 EXOC7Q9UPT5 735 aa14.18□□□□□ -0.14
USP42-203ENST00000426246 STXBP5LQ9Y2K9 1186 aa14.18□□□□□ -0.14
USP42-203ENST00000426246 MRPL42Q9Y6G3 142 aaKnown RBP14.18□□□□□ -0.14
USP42-203ENST00000426246 EIF3DO15371 548 aaKnown RBP eCLIP14.17□□□□□ -0.14
USP42-203ENST00000426246 ZBED4O75132 1171 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 HLA-DRAP01903 254 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 NLRP11P59045 1033 aaKnown RBP14.17□□□□□ -0.14
USP42-203ENST00000426246 TAS2R40P59535 323 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 TRPC3Q13507 836 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 SLMAPQ14BN4 828 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 ERMARDQ5T6L9 678 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 LIN9Q5TKA1 542 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 AGBL2Q5U5Z8 902 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 NIPA1Q7RTP0 329 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 ZNF572Q7Z3I7 529 aaPredicted RBP14.17□□□□□ -0.14
USP42-203ENST00000426246 FBF1Q8TES7 1133 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 ZC3H15Q8WU90 426 aaKnown RBP14.17□□□□□ -0.14
USP42-203ENST00000426246 CDCA5Q96FF9 252 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 NCAPGQ9BPX3 1015 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 PIH1D1Q9NWS0 290 aaKnown RBP14.17□□□□□ -0.14
USP42-203ENST00000426246 IKBKGQ9Y6K9 419 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 DNAH12Q6ZR08 3092 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 GJB1P08034 283 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 EPHX2P34913 555 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 PCK1P35558 622 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 SETDB1Q15047 1291 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 MOB2Q70IA6 237 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 MYPNQ86TC9 1320 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 TTC16Q8NEE8 873 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 DTX3LQ8TDB6 740 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 CLMNQ96JQ2 1002 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 OSBPL8Q9BZF1 889 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 PARP2Q9UGN5 583 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 NAALADL1Q9UQQ1 740 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 FAM187AA6NFU0 413 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 GLTPD2A6NH11 291 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 ADSSP30520 456 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 FNTAP49354 379 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 MOGSQ13724 837 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 RCN2Q14257 317 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 NEDD9Q14511 834 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 PPP2R5AQ15172 486 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 ANKRD35Q8N283 1001 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 CCDC89Q8N998 374 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 PARD3BQ8TEW8 1205 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 TTC17Q96AE7 1141 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 NPHS2Q9NP85 383 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 PXMP2Q9NR77 195 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 DOCK5Q9H7D0 1870 aa14.17□□□□□ -0.14
USP42-203ENST00000426246 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.16□□□□□ -0.14
USP42-203ENST00000426246 C2orf71A6NGG8 1288 aa14.16□□□□□ -0.14
USP42-203ENST00000426246 F8VP50 259 aa14.16□□□□□ -0.14
USP42-203ENST00000426246 PPFIA2O75334 1257 aa14.16□□□□□ -0.14
USP42-203ENST00000426246 TNFRSF8P28908 595 aa14.16□□□□□ -0.14
USP42-203ENST00000426246 C1orf131Q8NDD1 294 aaKnown RBP14.16□□□□□ -0.14
USP42-203ENST00000426246 WNT8AQ9H1J5 351 aa14.16□□□□□ -0.14
USP42-203ENST00000426246 ZDHHC18Q9NUE0 388 aa14.16□□□□□ -0.14
USP42-203ENST00000426246 INO80B-WBP1J3KQ70 363 aa14.16□□□□□ -0.14
USP42-203ENST00000426246 CBX6O95503 412 aa14.16□□□□□ -0.14
USP42-203ENST00000426246 CCNE2O96020 404 aa14.16□□□□□ -0.14
USP42-203ENST00000426246 SSTR1P30872 391 aa14.16□□□□□ -0.14
USP42-203ENST00000426246 YWHAGP61981 247 aaKnown RBP eCLIP14.16□□□□□ -0.14
USP42-203ENST00000426246 LACTBP83111 547 aaPredicted RBP14.16□□□□□ -0.14
USP42-203ENST00000426246 GAD2Q05329 585 aa14.16□□□□□ -0.14
USP42-203ENST00000426246 NBPF20Q3BBV1 942 aa14.16□□□□□ -0.14
USP42-203ENST00000426246 SPATA21Q7Z572 469 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms