RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 GCN1Q92616 2671 aaKnown RBP15.57■□□□□ 0.08
HDAC6-206ENST00000426196 LAMA5O15230 3695 aa15.57■□□□□ 0.08
HDAC6-206ENST00000426196 A0A1W2PRU2 124 aa15.57■□□□□ 0.08
HDAC6-206ENST00000426196 PCNX2A6NKB5 2137 aa15.57■□□□□ 0.08
HDAC6-206ENST00000426196 C4orf47A7E2U8 309 aa15.57■□□□□ 0.08
HDAC6-206ENST00000426196 PODXLO00592 558 aa15.57■□□□□ 0.08
HDAC6-206ENST00000426196 ATG13O75143 517 aa15.57■□□□□ 0.08
HDAC6-206ENST00000426196 CPB1P15086 417 aa15.57■□□□□ 0.08
HDAC6-206ENST00000426196 RING1Q06587 406 aa15.57■□□□□ 0.08
HDAC6-206ENST00000426196 SH3PXD2AQ5TCZ1 1133 aa15.57■□□□□ 0.08
HDAC6-206ENST00000426196 PIK3AP1Q6ZUJ8 805 aa15.57■□□□□ 0.08
HDAC6-206ENST00000426196 ABCA7Q8IZY2 2146 aa15.57■□□□□ 0.08
HDAC6-206ENST00000426196 DEPTORQ8TB45 409 aa15.57■□□□□ 0.08
HDAC6-206ENST00000426196 GATA6Q92908 595 aa15.57■□□□□ 0.08
HDAC6-206ENST00000426196 AIFM3Q96NN9 605 aa15.57■□□□□ 0.08
HDAC6-206ENST00000426196 TOPORSQ9NS56 1045 aaPredicted RBP15.57■□□□□ 0.08
HDAC6-206ENST00000426196 SLC38A7Q9NVC3 462 aa15.57■□□□□ 0.08
HDAC6-206ENST00000426196 PCDHA12Q9UN75 941 aa15.57■□□□□ 0.08
HDAC6-206ENST00000426196 WASF3Q9UPY6 502 aa15.57■□□□□ 0.08
HDAC6-206ENST00000426196 ZNF638Q14966 1978 aaKnown RBP15.56■□□□□ 0.08
HDAC6-206ENST00000426196 SMG1Q96Q15 3661 aaKnown RBP15.56■□□□□ 0.08
HDAC6-206ENST00000426196 SMIM28A0A1B0GU29 152 aa15.56■□□□□ 0.08
HDAC6-206ENST00000426196 XRCC6P12956 609 aaKnown RBP eCLIP15.56■□□□□ 0.08
HDAC6-206ENST00000426196 ATP2B1P20020 1258 aa15.56■□□□□ 0.08
HDAC6-206ENST00000426196 YARSP54577 528 aaKnown RBP15.56■□□□□ 0.08
HDAC6-206ENST00000426196 EVCP57679 992 aa15.56■□□□□ 0.08
HDAC6-206ENST00000426196 PLCB2Q00722 1185 aa15.56■□□□□ 0.08
HDAC6-206ENST00000426196 CREB5Q02930 508 aa15.56■□□□□ 0.08
HDAC6-206ENST00000426196 PLD1Q13393 1074 aa15.56■□□□□ 0.08
HDAC6-206ENST00000426196 MRPL58Q14197 206 aaKnown RBP15.56■□□□□ 0.08
HDAC6-206ENST00000426196 PLK5Q496M5 336 aa15.56■□□□□ 0.08
HDAC6-206ENST00000426196 ARID3BQ8IVW6 561 aaPredicted RBP15.56■□□□□ 0.08
HDAC6-206ENST00000426196 APPL2Q8NEU8 664 aa15.56■□□□□ 0.08
HDAC6-206ENST00000426196 ZFYVE19Q96K21 471 aa15.56■□□□□ 0.08
HDAC6-206ENST00000426196 SCNM1Q9BWG6 230 aa15.56■□□□□ 0.08
HDAC6-206ENST00000426196 CCDC113Q9H0I3 377 aa15.56■□□□□ 0.08
HDAC6-206ENST00000426196 USP20Q9Y2K6 914 aa15.56■□□□□ 0.08
HDAC6-206ENST00000426196 YIPF1Q9Y548 306 aa15.56■□□□□ 0.08
HDAC6-206ENST00000426196 THADAQ6YHU6 1953 aa15.56■□□□□ 0.08
HDAC6-206ENST00000426196 CACNA1EQ15878 2313 aa15.56■□□□□ 0.08
HDAC6-206ENST00000426196 ITPR1Q14643 2758 aa15.55■□□□□ 0.08
HDAC6-206ENST00000426196 RHOBTB1O94844 696 aa15.55■□□□□ 0.08
HDAC6-206ENST00000426196 CAVIN2O95810 425 aa15.55■□□□□ 0.08
HDAC6-206ENST00000426196 CEACAM1P13688 526 aa15.55■□□□□ 0.08
HDAC6-206ENST00000426196 XBP1P17861 261 aa15.55■□□□□ 0.08
HDAC6-206ENST00000426196 PSMA5P28066 241 aa15.55■□□□□ 0.08
HDAC6-206ENST00000426196 NAMPTP43490 491 aa15.55■□□□□ 0.08
HDAC6-206ENST00000426196 SOX4Q06945 474 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-206ENST00000426196 KARSQ15046 597 aaKnown RBP15.55■□□□□ 0.08
HDAC6-206ENST00000426196 PTPAQ15257 358 aa15.55■□□□□ 0.08
HDAC6-206ENST00000426196 BMP2KLQ5H9B9 411 aa15.55■□□□□ 0.08
HDAC6-206ENST00000426196 KCNB2Q92953 911 aa15.55■□□□□ 0.08
HDAC6-206ENST00000426196 TMEM209Q96SK2 561 aa15.55■□□□□ 0.08
HDAC6-206ENST00000426196 CCDC94Q9BW85 323 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-206ENST00000426196 OBP2AQ9NY56 170 aa15.55■□□□□ 0.08
HDAC6-206ENST00000426196 SNX14Q9Y5W7 946 aa15.55■□□□□ 0.08
HDAC6-206ENST00000426196 FLNBO75369 2602 aaKnown RBP15.54■□□□□ 0.08
HDAC6-206ENST00000426196 A0A087WWV3 80 aa15.54■□□□□ 0.08
HDAC6-206ENST00000426196 EDN1P05305 212 aa15.54■□□□□ 0.08
HDAC6-206ENST00000426196 PI4KAP42356 2102 aa15.54■□□□□ 0.08
HDAC6-206ENST00000426196 EPHB3P54753 998 aa15.54■□□□□ 0.08
HDAC6-206ENST00000426196 GRSF1Q12849 480 aaKnown RBP eCLIP15.54■□□□□ 0.08
HDAC6-206ENST00000426196 PPP2R5AQ15172 486 aa15.54■□□□□ 0.08
HDAC6-206ENST00000426196 CALCRLQ16602 461 aa15.54■□□□□ 0.08
HDAC6-206ENST00000426196 ITPRIPL2Q3MIP1 535 aa15.54■□□□□ 0.08
HDAC6-206ENST00000426196 ATF7IP2Q5U623 682 aa15.54■□□□□ 0.08
HDAC6-206ENST00000426196 PKN3Q6P5Z2 889 aa15.54■□□□□ 0.08
HDAC6-206ENST00000426196 RNF19BQ6ZMZ0 732 aa15.54■□□□□ 0.08
HDAC6-206ENST00000426196 TMC8Q8IU68 726 aa15.54■□□□□ 0.08
HDAC6-206ENST00000426196 GPIHBP1Q8IV16 184 aa15.54■□□□□ 0.08
HDAC6-206ENST00000426196 CAMKK1Q8N5S9 505 aa15.54■□□□□ 0.08
HDAC6-206ENST00000426196 BSNDQ8WZ55 320 aa15.54■□□□□ 0.08
HDAC6-206ENST00000426196 SUSD3Q96L08 255 aa15.54■□□□□ 0.08
HDAC6-206ENST00000426196 TMEM9BQ9NQ34 198 aa15.54■□□□□ 0.08
HDAC6-206ENST00000426196 TPCN1Q9ULQ1 816 aa15.54■□□□□ 0.08
HDAC6-206ENST00000426196 LNP1A1A4G5 178 aa15.53■□□□□ 0.08
HDAC6-206ENST00000426196 TOP3BO95985 862 aaKnown RBP15.53■□□□□ 0.08
HDAC6-206ENST00000426196 CSRP1P21291 193 aaKnown RBP15.53■□□□□ 0.08
HDAC6-206ENST00000426196 RPL9P32969 192 aaKnown RBP15.53■□□□□ 0.08
HDAC6-206ENST00000426196 MCM4P33991 863 aa15.53■□□□□ 0.08
HDAC6-206ENST00000426196 EFNA5P52803 228 aa15.53■□□□□ 0.08
HDAC6-206ENST00000426196 TNK2Q07912 1038 aa15.53■□□□□ 0.08
HDAC6-206ENST00000426196 ARHGAP15Q53QZ3 475 aa15.53■□□□□ 0.08
HDAC6-206ENST00000426196 STXBP5Q5T5C0 1151 aa15.53■□□□□ 0.08
HDAC6-206ENST00000426196 BPIFB1Q8TDL5 484 aa15.53■□□□□ 0.08
HDAC6-206ENST00000426196 DUSP15Q9H1R2 295 aaPredicted RBP15.53■□□□□ 0.08
HDAC6-206ENST00000426196 TTC12Q9H892 705 aaPredicted RBP15.53■□□□□ 0.08
HDAC6-206ENST00000426196 THG1LQ9NWX6 298 aaKnown RBP15.53■□□□□ 0.08
HDAC6-206ENST00000426196 GON4LQ3T8J9 2241 aa15.53■□□□□ 0.08
HDAC6-206ENST00000426196 BCLAF3A2AJT9 711 aaKnown RBP15.52■□□□□ 0.08
HDAC6-206ENST00000426196 FGF19O95750 216 aa15.52■□□□□ 0.08
HDAC6-206ENST00000426196 MARCKSP29966 332 aaPredicted RBP15.52■□□□□ 0.08
HDAC6-206ENST00000426196 GRM5P41594 1212 aa15.52■□□□□ 0.08
HDAC6-206ENST00000426196 ALDH1A3P47895 512 aa15.52■□□□□ 0.08
HDAC6-206ENST00000426196 XKR4Q5GH76 650 aa15.52■□□□□ 0.08
HDAC6-206ENST00000426196 TMEM196Q5HYL7 178 aa15.52■□□□□ 0.08
HDAC6-206ENST00000426196 GPR158Q5T848 1215 aa15.52■□□□□ 0.08
HDAC6-206ENST00000426196 DDX12PQ92771 950 aa15.52■□□□□ 0.08
HDAC6-206ENST00000426196 COL26A1Q96A83 441 aa15.52■□□□□ 0.08
HDAC6-206ENST00000426196 IFT74Q96LB3 600 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms