RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 FAM184AQ8NB25 1140 aa16.35■□□□□ 0.21
ATG4B-209ENST00000425239 APPL2Q8NEU8 664 aa16.35■□□□□ 0.21
ATG4B-209ENST00000425239 DNAJC25Q9H1X3 360 aa16.35■□□□□ 0.21
ATG4B-209ENST00000425239 CHRDQ9H2X0 955 aa16.35■□□□□ 0.21
ATG4B-209ENST00000425239 PLEKHA5Q9HAU0 1116 aa16.35■□□□□ 0.21
ATG4B-209ENST00000425239 SH2B1Q9NRF2 756 aaPredicted RBP16.35■□□□□ 0.21
ATG4B-209ENST00000425239 CXCL8P10145 99 aa16.34■□□□□ 0.21
ATG4B-209ENST00000425239 TNFSF9P41273 254 aa16.34■□□□□ 0.21
ATG4B-209ENST00000425239 NCKAP1LP55160 1127 aa16.34■□□□□ 0.21
ATG4B-209ENST00000425239 NOLC1Q14978 699 aaKnown RBP eCLIP16.34■□□□□ 0.21
ATG4B-209ENST00000425239 RSPO4Q2I0M5 234 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-209ENST00000425239 CYP4A22Q5TCH4 519 aa16.34■□□□□ 0.21
ATG4B-209ENST00000425239 ZNF280DQ6N043 979 aa16.34■□□□□ 0.21
ATG4B-209ENST00000425239 MFSD6LQ8IWD5 586 aa16.34■□□□□ 0.21
ATG4B-209ENST00000425239 KCTD17Q8N5Z5 321 aa16.34■□□□□ 0.21
ATG4B-209ENST00000425239 SHKBP1Q8TBC3 707 aa16.34■□□□□ 0.21
ATG4B-209ENST00000425239 ATRIPQ8WXE1 791 aa16.34■□□□□ 0.21
ATG4B-209ENST00000425239 IRF7Q92985 503 aa16.34■□□□□ 0.21
ATG4B-209ENST00000425239 ZNF512Q96ME7 567 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-209ENST00000425239 LRRC3BQ96PB8 259 aa16.34■□□□□ 0.21
ATG4B-209ENST00000425239 MKNK1Q9BUB5 465 aa16.34■□□□□ 0.21
ATG4B-209ENST00000425239 BRD9Q9H8M2 597 aa16.34■□□□□ 0.21
ATG4B-209ENST00000425239 MRPS17Q9Y2R5 130 aaKnown RBP16.34■□□□□ 0.21
ATG4B-209ENST00000425239 TIMM13Q9Y5L4 95 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-209ENST00000425239 NPHP3-ACAD11A0A0J9YXS1 232 aa16.33■□□□□ 0.2
ATG4B-209ENST00000425239 MAN2B1O00754 1011 aa16.33■□□□□ 0.2
ATG4B-209ENST00000425239 CLDN3O15551 220 aa16.33■□□□□ 0.2
ATG4B-209ENST00000425239 EIF5BO60841 1220 aaKnown RBP16.33■□□□□ 0.2
ATG4B-209ENST00000425239 CLTAP09496 248 aa16.33■□□□□ 0.2
ATG4B-209ENST00000425239 OR4Q2P0C623 313 aa16.33■□□□□ 0.2
ATG4B-209ENST00000425239 CHRNB1P11230 501 aa16.33■□□□□ 0.2
ATG4B-209ENST00000425239 HARSP12081 509 aaKnown RBP16.33■□□□□ 0.2
ATG4B-209ENST00000425239 CYP3A5P20815 502 aa16.33■□□□□ 0.2
ATG4B-209ENST00000425239 GDI1P31150 447 aa16.33■□□□□ 0.2
ATG4B-209ENST00000425239 MCM4P33991 863 aa16.33■□□□□ 0.2
ATG4B-209ENST00000425239 MLLT6P55198 1093 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-209ENST00000425239 GPR17Q13304 367 aa16.33■□□□□ 0.2
ATG4B-209ENST00000425239 GNL2Q13823 731 aaKnown RBP16.33■□□□□ 0.2
ATG4B-209ENST00000425239 TEAD2Q15562 447 aa16.33■□□□□ 0.2
ATG4B-209ENST00000425239 TMEM119Q4V9L6 283 aa16.33■□□□□ 0.2
ATG4B-209ENST00000425239 ZSCAN18Q8TBC5 510 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-209ENST00000425239 FAM126AQ9BYI3 521 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-209ENST00000425239 ANKFY1Q9P2R3 1169 aa16.33■□□□□ 0.2
ATG4B-209ENST00000425239 KCNG1Q9UIX4 513 aa16.33■□□□□ 0.2
ATG4B-209ENST00000425239 LACTBL1A8MY62 500 aa16.32■□□□□ 0.2
ATG4B-209ENST00000425239 PPEF2O14830 753 aa16.32■□□□□ 0.2
ATG4B-209ENST00000425239 FCHO2Q0JRZ9 810 aa16.32■□□□□ 0.2
ATG4B-209ENST00000425239 STRN3Q13033 797 aa16.32■□□□□ 0.2
ATG4B-209ENST00000425239 ENOX2Q16206 610 aaKnown RBP16.32■□□□□ 0.2
ATG4B-209ENST00000425239 ERICH6BQ5W0A0 696 aa16.32■□□□□ 0.2
ATG4B-209ENST00000425239 IQCEQ6IPM2 695 aa16.32■□□□□ 0.2
ATG4B-209ENST00000425239 CENPPQ6IPU0 288 aa16.32■□□□□ 0.2
ATG4B-209ENST00000425239 LEMD2Q8NC56 503 aa16.32■□□□□ 0.2
ATG4B-209ENST00000425239 DEPDC1BQ8WUY9 529 aa16.32■□□□□ 0.2
ATG4B-209ENST00000425239 FAM3CQ92520 227 aa16.32■□□□□ 0.2
ATG4B-209ENST00000425239 FIZ1Q96SL8 496 aa16.32■□□□□ 0.2
ATG4B-209ENST00000425239 PLIN2Q99541 437 aa16.32■□□□□ 0.2
ATG4B-209ENST00000425239 HINFPQ9BQA5 517 aa16.32■□□□□ 0.2
ATG4B-209ENST00000425239 LMAN1LQ9HAT1 526 aa16.32■□□□□ 0.2
ATG4B-209ENST00000425239 PARD6AQ9NPB6 346 aa16.32■□□□□ 0.2
ATG4B-209ENST00000425239 KCND2Q9NZV8 630 aa16.32■□□□□ 0.2
ATG4B-209ENST00000425239 NDRG2Q9UN36 371 aaKnown RBP16.32■□□□□ 0.2
ATG4B-209ENST00000425239 SMG5Q9UPR3 1016 aaKnown RBP16.32■□□□□ 0.2
ATG4B-209ENST00000425239 YIPF1Q9Y548 306 aa16.32■□□□□ 0.2
ATG4B-209ENST00000425239 HEPACAM2A8MVW5 462 aa16.31■□□□□ 0.2
ATG4B-209ENST00000425239 PIGRP01833 764 aa16.31■□□□□ 0.2
ATG4B-209ENST00000425239 PLA2G4BP0C869 781 aa16.31■□□□□ 0.2
ATG4B-209ENST00000425239 MYL4P12829 197 aa16.31■□□□□ 0.2
ATG4B-209ENST00000425239 GUCY2FP51841 1108 aa16.31■□□□□ 0.2
ATG4B-209ENST00000425239 SMTNP53814 917 aa16.31■□□□□ 0.2
ATG4B-209ENST00000425239 ATXN1P54253 815 aaKnown RBP16.31■□□□□ 0.2
ATG4B-209ENST00000425239 CACNB1Q02641 598 aaPredicted RBP16.31■□□□□ 0.2
ATG4B-209ENST00000425239 YWHAHQ04917 246 aaPredicted RBP16.31■□□□□ 0.2
ATG4B-209ENST00000425239 DUSP4Q13115 394 aa16.31■□□□□ 0.2
ATG4B-209ENST00000425239 RILPL1Q5EBL4 403 aa16.31■□□□□ 0.2
ATG4B-209ENST00000425239 SLC39A4Q6P5W5 647 aa16.31■□□□□ 0.2
ATG4B-209ENST00000425239 GAREM2Q75VX8 874 aa16.31■□□□□ 0.2
ATG4B-209ENST00000425239 HAUS6Q7Z4H7 955 aa16.31■□□□□ 0.2
ATG4B-209ENST00000425239 OXCT2Q9BYC2 517 aaPredicted RBP16.31■□□□□ 0.2
ATG4B-209ENST00000425239 GPR88Q9GZN0 384 aa16.31■□□□□ 0.2
ATG4B-209ENST00000425239 ASAH2Q9NR71 780 aa16.31■□□□□ 0.2
ATG4B-209ENST00000425239 PIAS3Q9Y6X2 628 aa16.31■□□□□ 0.2
ATG4B-209ENST00000425239 CPB1P15086 417 aa16.3■□□□□ 0.2
ATG4B-209ENST00000425239 MARCKSP29966 332 aaPredicted RBP16.3■□□□□ 0.2
ATG4B-209ENST00000425239 ZNF131P52739 623 aa16.3■□□□□ 0.2
ATG4B-209ENST00000425239 LILRA4P59901 499 aa16.3■□□□□ 0.2
ATG4B-209ENST00000425239 STXBP5Q5T5C0 1151 aa16.3■□□□□ 0.2
ATG4B-209ENST00000425239 SPATA1Q5VX52 437 aa16.3■□□□□ 0.2
ATG4B-209ENST00000425239 ELMOD1Q8N336 334 aa16.3■□□□□ 0.2
ATG4B-209ENST00000425239 GPR161Q8N6U8 529 aaKnown RBP16.3■□□□□ 0.2
ATG4B-209ENST00000425239 PGLYRP2Q96PD5 576 aa16.3■□□□□ 0.2
ATG4B-209ENST00000425239 TMEM209Q96SK2 561 aa16.3■□□□□ 0.2
ATG4B-209ENST00000425239 IER2Q9BTL4 223 aa16.3■□□□□ 0.2
ATG4B-209ENST00000425239 BLOC1S4Q9NUP1 217 aa16.3■□□□□ 0.2
ATG4B-209ENST00000425239 NCDNQ9UBB6 729 aa16.3■□□□□ 0.2
ATG4B-209ENST00000425239 UBQLN1Q9UMX0 589 aaKnown RBP16.3■□□□□ 0.2
ATG4B-209ENST00000425239 SLC27A5Q9Y2P5 690 aa16.3■□□□□ 0.2
ATG4B-209ENST00000425239 ANK1P16157 1881 aa16.3■□□□□ 0.2
ATG4B-209ENST00000425239 LAMA1P25391 3075 aa16.3■□□□□ 0.2
ATG4B-209ENST00000425239 A0A0B4J269 797 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms