RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, human

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR1A-204	ENST00000424089	EPS8L1	Q8TE68	723 aa		10.75	□□□□□ -0.69
POLR1A-204	ENST00000424089	TRIM11	Q96F44	468 aa		10.75	□□□□□ -0.69
POLR1A-204	ENST00000424089	HES6	Q96HZ4	224 aa		10.75	□□□□□ -0.69
POLR1A-204	ENST00000424089	FAXDC2	Q96IV6	333 aa		10.75	□□□□□ -0.69
POLR1A-204	ENST00000424089	KREMEN1	Q96MU8	473 aa		10.75	□□□□□ -0.69
POLR1A-204	ENST00000424089	RPS6KC1	Q96S38	1066 aa		10.75	□□□□□ -0.69
POLR1A-204	ENST00000424089	CGRRF1	Q99675	332 aa		10.75	□□□□□ -0.69
POLR1A-204	ENST00000424089	CCDC113	Q9H0I3	377 aa		10.75	□□□□□ -0.69
POLR1A-204	ENST00000424089	RBAK	Q9NYW8	714 aa	Predicted RBP	10.75	□□□□□ -0.69
POLR1A-204	ENST00000424089	ERAP1	Q9NZ08	941 aa		10.75	□□□□□ -0.69
POLR1A-204	ENST00000424089	TMEM59L	Q9UK28	342 aa		10.75	□□□□□ -0.69
POLR1A-204	ENST00000424089	PCDHB2	Q9Y5E7	798 aa		10.75	□□□□□ -0.69
POLR1A-204	ENST00000424089	MTCH2	Q9Y6C9	303 aa		10.75	□□□□□ -0.69
POLR1A-204	ENST00000424089	UMODL1	Q5DID0	1318 aa		10.75	□□□□□ -0.69
POLR1A-204	ENST00000424089	MUC6	Q6W4X9	2439 aa		10.75	□□□□□ -0.69
POLR1A-204	ENST00000424089	MYH11	P35749	1972 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	SPDYE4	A6NLX3	237 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	TULP1	O00294	542 aa	Predicted RBP	10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	DYNC1LI2	O43237	492 aa	Predicted RBP	10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	B4GALT4	O60513	344 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	FTL	P02792	175 aa	Predicted RBP	10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	CA3	P07451	260 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	MYBL1	P10243	752 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	MYOG	P15173	224 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	POU3F3	P20264	500 aa	Predicted RBP	10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	USP8	P40818	1118 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	MATR3	P43243	847 aa	Known RBP eCLIP	10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	CBX1	P83916	185 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	MCL1	Q07820	350 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	LAMTOR4	Q0VGL1	99 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	KYAT1	Q16773	422 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	HSDL1	Q3SXM5	330 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	CRELD2	Q6UXH1	353 aa	Predicted RBP	10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	TRIM72	Q6ZMU5	477 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	TSHZ1	Q6ZSZ6	1077 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	EEPD1	Q7L9B9	569 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	NT5DC3	Q86UY8	548 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	WDR49	Q8IV35	697 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	IFT20	Q8IY31	132 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	HLA-C	Q95604	372 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	SCLY	Q96I15	445 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	SLC9A7	Q96T83	725 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	POP1	Q99575	1024 aa	Known RBP	10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	TARS2	Q9BW92	718 aa	Known RBP	10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	UBXN6	Q9BZV1	441 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	TRPV6	Q9H1D0	765 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	CARD9	Q9H257	536 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	C11orf16	Q9NQ32	467 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	SEPT11	Q9NVA2	429 aa	Known RBP	10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	STIM2	Q9P246	746 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	CHD7	Q9P2D1	2997 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	UVRAG	Q9P2Y5	699 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	COL1A2	P08123	1366 aa		10.74	□□□□□ -0.69
POLR1A-204	ENST00000424089	PRRC2B	Q5JSZ5	2229 aa	Known RBP	10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	XIRP2	A4UGR9	3374 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	TMCO5B	A8MYB1	307 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	ZBTB42	B2RXF5	422 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	PGRMC1	O00264	195 aa	Known RBP	10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	ACKR2	O00590	384 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	KCNK3	O14649	394 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	OGT	O15294	1046 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	CYP26A1	O43174	497 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	TLL1	O43897	1013 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	PPFIA4	O75335	1185 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	SEC31A	O94979	1220 aa	Known RBP	10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	HLA-DRA	P01903	254 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	CYP1A2	P05177	515 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	CHRNB2	P17787	502 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	CXCR5	P32302	372 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	RFC2	P35250	354 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	PIK3CA	P42336	1068 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	PLA2G4A	P47712	749 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	NLRP11	P59045	1033 aa	Known RBP	10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	CDC42EP1	Q00587	391 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	C2orf54	Q08AI8	447 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	NNT	Q13423	1086 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	FAM187B	Q17R55	369 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	IQSEC1	Q6DN90	963 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	ACAD10	Q6JQN1	1059 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	TAPT1	Q6NXT6	567 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	C8orf74	Q6P047	294 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	EMB	Q6PCB8	327 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	DEFB128	Q7Z7B8	93 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	NOP9	Q86U38	636 aa	Known RBP	10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	IFNLR1	Q8IU57	520 aa	Predicted RBP	10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	BRSK2	Q8IWQ3	736 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	FBXO16	Q8IX29	292 aa	Predicted RBP	10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	UBL4B	Q8N7F7	174 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	PPTC7	Q8NI37	304 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	PHOSPHO2	Q8TCD6	241 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	ZNF516	Q92618	1163 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.73	□□□□□ -0.69	3e-8	■■■■□ 25.3
POLR1A-204	ENST00000424089	PKNOX2	Q96KN3	472 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	ACO2	Q99798	780 aa	Known RBP	10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	IMPG2	Q9BZV3	1241 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	KATNBL1	Q9H079	304 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	WNT8A	Q9H1J5	351 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	FZD8	Q9H461	694 aa		10.73	□□□□□ -0.69
POLR1A-204	ENST00000424089	SUGCT	Q9HAC7	445 aa		10.73	□□□□□ -0.69

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