RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 CCDC163A0A0D9SF12 145 aa18.32■□□□□ 0.52
CHCHD3-202ENST00000423635 SLC38A8A6NNN8 435 aa18.32■□□□□ 0.52
CHCHD3-202ENST00000423635 AXIN1O15169 862 aa18.32■□□□□ 0.52
CHCHD3-202ENST00000423635 MUTP22033 750 aa18.32■□□□□ 0.52
CHCHD3-202ENST00000423635 CTHP32929 405 aa18.32■□□□□ 0.52
CHCHD3-202ENST00000423635 RAP1GAPP47736 663 aa18.32■□□□□ 0.52
CHCHD3-202ENST00000423635 CCINQ13939 588 aa18.32■□□□□ 0.52
CHCHD3-202ENST00000423635 ACAP3Q96P50 834 aa18.32■□□□□ 0.52
CHCHD3-202ENST00000423635 ARRDC1-AS1Q9H2J1 176 aa18.32■□□□□ 0.52
CHCHD3-202ENST00000423635 POLD4Q9HCU8 107 aa18.32■□□□□ 0.52
CHCHD3-202ENST00000423635 RXFP3Q9NSD7 469 aa18.32■□□□□ 0.52
CHCHD3-202ENST00000423635 CNTN3Q9P232 1028 aa18.32■□□□□ 0.52
CHCHD3-202ENST00000423635 GREB1Q4ZG55 1949 aa18.32■□□□□ 0.52
CHCHD3-202ENST00000423635 KCNA4P22459 653 aa18.31■□□□□ 0.52
CHCHD3-202ENST00000423635 HOXC13P31276 330 aa18.31■□□□□ 0.52
CHCHD3-202ENST00000423635 OSTNP61366 133 aa18.31■□□□□ 0.52
CHCHD3-202ENST00000423635 SF3A2Q15428 464 aaKnown RBP18.31■□□□□ 0.52
CHCHD3-202ENST00000423635 TMC8Q8IU68 726 aa18.31■□□□□ 0.52
CHCHD3-202ENST00000423635 ARID3BQ8IVW6 561 aaPredicted RBP18.31■□□□□ 0.52
CHCHD3-202ENST00000423635 C12orf50Q8NA57 414 aaPredicted RBP18.31■□□□□ 0.52
CHCHD3-202ENST00000423635 GAB3Q8WWW8 586 aa18.31■□□□□ 0.52
CHCHD3-202ENST00000423635 TBC1D32Q96NH3 1257 aa18.31■□□□□ 0.52
CHCHD3-202ENST00000423635 LRRC3BQ96PB8 259 aa18.31■□□□□ 0.52
CHCHD3-202ENST00000423635 LSM14BQ9BX40 385 aaKnown RBP18.31■□□□□ 0.52
CHCHD3-202ENST00000423635 OXCT2Q9BYC2 517 aaPredicted RBP18.31■□□□□ 0.52
CHCHD3-202ENST00000423635 SLITRK6Q9H5Y7 841 aa18.31■□□□□ 0.52
CHCHD3-202ENST00000423635 TMEM134Q9H6X4 195 aa18.31■□□□□ 0.52
CHCHD3-202ENST00000423635 OBP2AQ9NY56 170 aa18.31■□□□□ 0.52
CHCHD3-202ENST00000423635 PDCD11Q14690 1871 aaKnown RBP18.31■□□□□ 0.52
CHCHD3-202ENST00000423635 A0A1W2PRU2 124 aa18.3■□□□□ 0.52
CHCHD3-202ENST00000423635 OAZ2O95190 189 aa18.3■□□□□ 0.52
CHCHD3-202ENST00000423635 EPN2O95208 641 aa18.3■□□□□ 0.52
CHCHD3-202ENST00000423635 VNN2O95498 520 aa18.3■□□□□ 0.52
CHCHD3-202ENST00000423635 PROS1P07225 676 aa18.3■□□□□ 0.52
CHCHD3-202ENST00000423635 PROZP22891 400 aa18.3■□□□□ 0.52
CHCHD3-202ENST00000423635 ARHGAP29Q52LW3 1261 aa18.3■□□□□ 0.52
CHCHD3-202ENST00000423635 PLA2G2CQ5R387 149 aa18.3■□□□□ 0.52
CHCHD3-202ENST00000423635 STPG1Q5TH74 334 aa18.3■□□□□ 0.52
CHCHD3-202ENST00000423635 CACNA2D4Q7Z3S7 1137 aa18.3■□□□□ 0.52
CHCHD3-202ENST00000423635 DIS3L2Q8IYB7 885 aaKnown RBP18.3■□□□□ 0.52
CHCHD3-202ENST00000423635 ERMNQ8TAM6 284 aa18.3■□□□□ 0.52
CHCHD3-202ENST00000423635 C18orf25Q96B23 403 aaPredicted RBP18.3■□□□□ 0.52
CHCHD3-202ENST00000423635 MKNK1Q9BUB5 465 aa18.3■□□□□ 0.52
CHCHD3-202ENST00000423635 GTSE1Q9NYZ3 720 aa18.3■□□□□ 0.52
CHCHD3-202ENST00000423635 PCDHB8Q9UN66 801 aa18.3■□□□□ 0.52
CHCHD3-202ENST00000423635 YIPF1Q9Y548 306 aa18.3■□□□□ 0.52
CHCHD3-202ENST00000423635 SDK1Q7Z5N4 2213 aa18.3■□□□□ 0.52
CHCHD3-202ENST00000423635 FRYQ5TBA9 3013 aa18.3■□□□□ 0.52
CHCHD3-202ENST00000423635 ABLIM1O14639 778 aa18.29■□□□□ 0.52
CHCHD3-202ENST00000423635 MEFVO15553 781 aaPredicted RBP18.29■□□□□ 0.52
CHCHD3-202ENST00000423635 MCF2P10911 925 aa18.29■□□□□ 0.52
CHCHD3-202ENST00000423635 CPB1P15086 417 aa18.29■□□□□ 0.52
CHCHD3-202ENST00000423635 MARCKSP29966 332 aaPredicted RBP18.29■□□□□ 0.52
CHCHD3-202ENST00000423635 WEE1P30291 646 aa18.29■□□□□ 0.52
CHCHD3-202ENST00000423635 MCM4P33991 863 aa18.29■□□□□ 0.52
CHCHD3-202ENST00000423635 PLD1Q13393 1074 aa18.29■□□□□ 0.52
CHCHD3-202ENST00000423635 PON2Q15165 354 aa18.29■□□□□ 0.52
CHCHD3-202ENST00000423635 ZNF568Q3ZCX4 644 aa18.29■□□□□ 0.52
CHCHD3-202ENST00000423635 DNAJC25Q9H1X3 360 aa18.29■□□□□ 0.52
CHCHD3-202ENST00000423635 RALYQ9UKM9 306 aaKnown RBP18.29■□□□□ 0.52
CHCHD3-202ENST00000423635 PCDHGA5Q9Y5G8 931 aa18.29■□□□□ 0.52
CHCHD3-202ENST00000423635 PHLPP2Q6ZVD8 1323 aa18.29■□□□□ 0.52
CHCHD3-202ENST00000423635 M0QZQ0 153 aa18.28■□□□□ 0.52
CHCHD3-202ENST00000423635 KCNK5O95279 499 aa18.28■□□□□ 0.52
CHCHD3-202ENST00000423635 MCM7P33993 719 aa18.28■□□□□ 0.52
CHCHD3-202ENST00000423635 ECM1Q16610 540 aa18.28■□□□□ 0.52
CHCHD3-202ENST00000423635 TAS1R3Q7RTX0 852 aa18.28■□□□□ 0.52
CHCHD3-202ENST00000423635 HAUS6Q7Z4H7 955 aa18.28■□□□□ 0.52
CHCHD3-202ENST00000423635 FAM200AQ8TCP9 573 aa18.28■□□□□ 0.52
CHCHD3-202ENST00000423635 ZC3H10Q96K80 434 aaKnown RBP18.28■□□□□ 0.52
CHCHD3-202ENST00000423635 TARS2Q9BW92 718 aaKnown RBP18.28■□□□□ 0.52
CHCHD3-202ENST00000423635 MRPL4Q9BYD3 311 aaKnown RBP18.28■□□□□ 0.52
CHCHD3-202ENST00000423635 ASB3Q9Y575 518 aa18.28■□□□□ 0.52
CHCHD3-202ENST00000423635 FAM208BQ5VWN6 2430 aa18.27■□□□□ 0.52
CHCHD3-202ENST00000423635 EXTL3O43909 919 aa18.27■□□□□ 0.52
CHCHD3-202ENST00000423635 RPP40O75818 363 aaKnown RBP18.27■□□□□ 0.52
CHCHD3-202ENST00000423635 AKAP3O75969 853 aa18.27■□□□□ 0.52
CHCHD3-202ENST00000423635 NPTX2P47972 431 aa18.27■□□□□ 0.52
CHCHD3-202ENST00000423635 EPHB3P54753 998 aa18.27■□□□□ 0.52
CHCHD3-202ENST00000423635 PLCB2Q00722 1185 aa18.27■□□□□ 0.52
CHCHD3-202ENST00000423635 YWHAHQ04917 246 aaPredicted RBP18.27■□□□□ 0.52
CHCHD3-202ENST00000423635 GPR17Q13304 367 aa18.27■□□□□ 0.52
CHCHD3-202ENST00000423635 CCDC6Q16204 474 aa18.27■□□□□ 0.52
CHCHD3-202ENST00000423635 STXBP5Q5T5C0 1151 aa18.27■□□□□ 0.52
CHCHD3-202ENST00000423635 GAREM2Q75VX8 874 aa18.27■□□□□ 0.52
CHCHD3-202ENST00000423635 KBTBD6Q86V97 674 aa18.27■□□□□ 0.52
CHCHD3-202ENST00000423635 GPIHBP1Q8IV16 184 aa18.27■□□□□ 0.52
CHCHD3-202ENST00000423635 TTC8Q8TAM2 541 aa18.27■□□□□ 0.52
CHCHD3-202ENST00000423635 ZFYVE19Q96K21 471 aa18.27■□□□□ 0.52
CHCHD3-202ENST00000423635 BHMT2Q9H2M3 363 aa18.27■□□□□ 0.52
CHCHD3-202ENST00000423635 CRISPLD1Q9H336 500 aa18.27■□□□□ 0.52
CHCHD3-202ENST00000423635 ARHGAP28Q9P2N2 729 aa18.27■□□□□ 0.52
CHCHD3-202ENST00000423635 BAHCC1Q9P281 2608 aa18.27■□□□□ 0.51
CHCHD3-202ENST00000423635 DPYSL4O14531 572 aa18.26■□□□□ 0.51
CHCHD3-202ENST00000423635 FGF19O95750 216 aa18.26■□□□□ 0.51
CHCHD3-202ENST00000423635 PEX3P56589 373 aa18.26■□□□□ 0.51
CHCHD3-202ENST00000423635 CACNB1Q02641 598 aaPredicted RBP18.26■□□□□ 0.51
CHCHD3-202ENST00000423635 DUSP4Q13115 394 aa18.26■□□□□ 0.51
CHCHD3-202ENST00000423635 SLC10A6Q3KNW5 377 aa18.26■□□□□ 0.51
CHCHD3-202ENST00000423635 HAUS3Q68CZ6 603 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms