RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 GAP43P17677 238 aa16.48■□□□□ 0.23
USB1-202ENST00000423271 ADSSP30520 456 aa16.48■□□□□ 0.23
USB1-202ENST00000423271 MRE11P49959 708 aa16.48■□□□□ 0.23
USB1-202ENST00000423271 CASP5P51878 434 aa16.48■□□□□ 0.23
USB1-202ENST00000423271 YWHAHQ04917 246 aaPredicted RBP16.48■□□□□ 0.23
USB1-202ENST00000423271 POTEHQ6S545 545 aa16.48■□□□□ 0.23
USB1-202ENST00000423271 RTL10Q7L3V2 364 aa16.48■□□□□ 0.23
USB1-202ENST00000423271 TCEAL8Q8IYN2 117 aa16.48■□□□□ 0.23
USB1-202ENST00000423271 BEST2Q8NFU1 509 aa16.48■□□□□ 0.23
USB1-202ENST00000423271 GPR152Q8TDT2 470 aa16.48■□□□□ 0.23
USB1-202ENST00000423271 HVCN1Q96D96 273 aa16.48■□□□□ 0.23
USB1-202ENST00000423271 SEL1LQ9UBV2 794 aa16.48■□□□□ 0.23
USB1-202ENST00000423271 CA14Q9ULX7 337 aa16.48■□□□□ 0.23
USB1-202ENST00000423271 SCN1AP35498 2009 aa16.48■□□□□ 0.23
USB1-202ENST00000423271 DMDP11532 3685 aa16.47■□□□□ 0.23
USB1-202ENST00000423271 NRG2O14511 850 aaPredicted RBP16.47■□□□□ 0.23
USB1-202ENST00000423271 SPTLC2O15270 562 aa16.47■□□□□ 0.23
USB1-202ENST00000423271 GALR2O43603 387 aaPredicted RBP16.47■□□□□ 0.23
USB1-202ENST00000423271 PI15O43692 258 aa16.47■□□□□ 0.23
USB1-202ENST00000423271 VNN2O95498 520 aa16.47■□□□□ 0.23
USB1-202ENST00000423271 IDEP14735 1019 aa16.47■□□□□ 0.23
USB1-202ENST00000423271 CLCN5P51795 746 aa16.47■□□□□ 0.23
USB1-202ENST00000423271 DNM1Q05193 864 aaKnown RBP16.47■□□□□ 0.23
USB1-202ENST00000423271 ADCY1Q08828 1119 aa16.47■□□□□ 0.23
USB1-202ENST00000423271 TMEM132DQ14C87 1099 aa16.47■□□□□ 0.23
USB1-202ENST00000423271 L1TD1Q5T7N2 865 aaKnown RBP16.47■□□□□ 0.23
USB1-202ENST00000423271 C9orf57Q5W0N0 161 aa16.47■□□□□ 0.23
USB1-202ENST00000423271 TPGS2Q68CL5 300 aa16.47■□□□□ 0.23
USB1-202ENST00000423271 SLFN12LQ6IEE8 588 aa16.47■□□□□ 0.23
USB1-202ENST00000423271 CRELD2Q6UXH1 353 aaPredicted RBP16.47■□□□□ 0.23
USB1-202ENST00000423271 DSTYKQ6XUX3 929 aa16.47■□□□□ 0.23
USB1-202ENST00000423271 RNF19BQ6ZMZ0 732 aa16.47■□□□□ 0.23
USB1-202ENST00000423271 CD302Q8IX05 232 aa16.47■□□□□ 0.23
USB1-202ENST00000423271 ZSWIM2Q8NEG5 633 aa16.47■□□□□ 0.23
USB1-202ENST00000423271 POMGNT1Q8WZA1 660 aa16.47■□□□□ 0.23
USB1-202ENST00000423271 CHAMP1Q96JM3 812 aa16.47■□□□□ 0.23
USB1-202ENST00000423271 TSPAN18Q96SJ8 248 aa16.47■□□□□ 0.23
USB1-202ENST00000423271 WNT16Q9UBV4 365 aa16.47■□□□□ 0.23
USB1-202ENST00000423271 AFF4Q9UHB7 1163 aaKnown RBP16.47■□□□□ 0.23
USB1-202ENST00000423271 KCNH3Q9ULD8 1083 aa16.47■□□□□ 0.23
USB1-202ENST00000423271 MRPS23Q9Y3D9 190 aaKnown RBP16.47■□□□□ 0.23
USB1-202ENST00000423271 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.47■□□□□ 0.23
USB1-202ENST00000423271 USP34Q70CQ2 3546 aa16.47■□□□□ 0.23
USB1-202ENST00000423271 FRMD3A2A2Y4 597 aa16.46■□□□□ 0.23
USB1-202ENST00000423271 H0Y858 1186 aa16.46■□□□□ 0.23
USB1-202ENST00000423271 OAZ2O95190 189 aa16.46■□□□□ 0.23
USB1-202ENST00000423271 GCNT3O95395 438 aa16.46■□□□□ 0.23
USB1-202ENST00000423271 CEBPBP17676 345 aa16.46■□□□□ 0.23
USB1-202ENST00000423271 AOC1P19801 751 aa16.46■□□□□ 0.23
USB1-202ENST00000423271 WNT7BP56706 349 aa16.46■□□□□ 0.23
USB1-202ENST00000423271 LILRA4P59901 499 aa16.46■□□□□ 0.23
USB1-202ENST00000423271 EFCAB13Q8IY85 973 aa16.46■□□□□ 0.23
USB1-202ENST00000423271 TCEAL4Q96EI5 215 aa16.46■□□□□ 0.23
USB1-202ENST00000423271 SENP8Q96LD8 212 aa16.46■□□□□ 0.23
USB1-202ENST00000423271 PGLYRP2Q96PD5 576 aa16.46■□□□□ 0.23
USB1-202ENST00000423271 KXD1Q9BQD3 176 aa16.46■□□□□ 0.23
USB1-202ENST00000423271 CORO1BQ9BR76 489 aa16.46■□□□□ 0.23
USB1-202ENST00000423271 OLFML3Q9NRN5 406 aa16.46■□□□□ 0.23
USB1-202ENST00000423271 DERAQ9Y315 318 aa16.46■□□□□ 0.23
USB1-202ENST00000423271 COL4A3Q01955 1670 aa16.46■□□□□ 0.23
USB1-202ENST00000423271 ANO9A1A5B4 782 aa16.45■□□□□ 0.22
USB1-202ENST00000423271 PIRO00625 290 aa16.45■□□□□ 0.22
USB1-202ENST00000423271 PPP6R2O75170 966 aa16.45■□□□□ 0.22
USB1-202ENST00000423271 YEATS4O95619 227 aa16.45■□□□□ 0.22
USB1-202ENST00000423271 PTPN2P17706 415 aa16.45■□□□□ 0.22
USB1-202ENST00000423271 TYMPP19971 482 aa16.45■□□□□ 0.22
USB1-202ENST00000423271 CCR2P41597 374 aa16.45■□□□□ 0.22
USB1-202ENST00000423271 NUBP1P53384 320 aa16.45■□□□□ 0.22
USB1-202ENST00000423271 NUCB2P80303 420 aa16.45■□□□□ 0.22
USB1-202ENST00000423271 TWF1Q12792 350 aa16.45■□□□□ 0.22
USB1-202ENST00000423271 E2F4Q16254 413 aa16.45■□□□□ 0.22
USB1-202ENST00000423271 PRSS36Q5K4E3 855 aa16.45■□□□□ 0.22
USB1-202ENST00000423271 ATL3Q6DD88 541 aa16.45■□□□□ 0.22
USB1-202ENST00000423271 OVOS1Q6IE37 1185 aa16.45■□□□□ 0.22
USB1-202ENST00000423271 MTSS1LQ765P7 747 aa16.45■□□□□ 0.22
USB1-202ENST00000423271 USP37Q86T82 979 aa16.45■□□□□ 0.22
USB1-202ENST00000423271 SAAL1Q96ER3 474 aa16.45■□□□□ 0.22
USB1-202ENST00000423271 MCRS1Q96EZ8 462 aa16.45■□□□□ 0.22
USB1-202ENST00000423271 ACCSQ96QU6 501 aa16.45■□□□□ 0.22
USB1-202ENST00000423271 CRISPLD1Q9H336 500 aa16.45■□□□□ 0.22
USB1-202ENST00000423271 ASB7Q9H672 318 aa16.45■□□□□ 0.22
USB1-202ENST00000423271 AVENQ9NQS1 362 aaPredicted RBP16.45■□□□□ 0.22
USB1-202ENST00000423271 ARHGEF3Q9NR81 526 aa16.45■□□□□ 0.22
USB1-202ENST00000423271 SLC2A4RGQ9NR83 387 aa16.45■□□□□ 0.22
USB1-202ENST00000423271 PANK4Q9NVE7 773 aa16.45■□□□□ 0.22
USB1-202ENST00000423271 CEP72Q9P209 647 aa16.45■□□□□ 0.22
USB1-202ENST00000423271 C2CD2Q9Y426 696 aa16.45■□□□□ 0.22
USB1-202ENST00000423271 ODC1P11926 461 aa16.44■□□□□ 0.22
USB1-202ENST00000423271 GPC5P78333 572 aa16.44■□□□□ 0.22
USB1-202ENST00000423271 POSTNQ15063 836 aa16.44■□□□□ 0.22
USB1-202ENST00000423271 SHC4Q6S5L8 630 aa16.44■□□□□ 0.22
USB1-202ENST00000423271 HS6ST3Q8IZP7 471 aa16.44■□□□□ 0.22
USB1-202ENST00000423271 GLIS3Q8NEA6 775 aa16.44■□□□□ 0.22
USB1-202ENST00000423271 ATOH1Q92858 354 aaPredicted RBP16.44■□□□□ 0.22
USB1-202ENST00000423271 HPS3Q969F9 1004 aa16.44■□□□□ 0.22
USB1-202ENST00000423271 FAM84AQ96KN4 292 aa16.44■□□□□ 0.22
USB1-202ENST00000423271 TMEM209Q96SK2 561 aa16.44■□□□□ 0.22
USB1-202ENST00000423271 FAM213AQ9BRX8 229 aa16.44■□□□□ 0.22
USB1-202ENST00000423271 TBC1D17Q9HA65 648 aa16.44■□□□□ 0.22
USB1-202ENST00000423271 EXOC7Q9UPT5 735 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms