RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 SPAG7O75391 227 aa16.76■□□□□ 0.27
CDH1-202ENST00000422392 DGAT1O75907 488 aa16.76■□□□□ 0.27
CDH1-202ENST00000422392 MYBL1P10243 752 aa16.76■□□□□ 0.27
CDH1-202ENST00000422392 ATP5DP30049 168 aa16.76■□□□□ 0.27
CDH1-202ENST00000422392 MAN1A1P33908 653 aa16.76■□□□□ 0.27
CDH1-202ENST00000422392 FASTKD3Q14CZ7 662 aaKnown RBP16.76■□□□□ 0.27
CDH1-202ENST00000422392 CCNG2Q16589 344 aa16.76■□□□□ 0.27
CDH1-202ENST00000422392 WLSQ5T9L3 541 aa16.76■□□□□ 0.27
CDH1-202ENST00000422392 MIS18BP1Q6P0N0 1132 aa16.76■□□□□ 0.27
CDH1-202ENST00000422392 FAM47EQ6ZV65 393 aa16.76■□□□□ 0.27
CDH1-202ENST00000422392 SYDE1Q6ZW31 735 aaPredicted RBP16.76■□□□□ 0.27
CDH1-202ENST00000422392 ZNF526Q8TF50 670 aaPredicted RBP16.76■□□□□ 0.27
CDH1-202ENST00000422392 ATP6V0A1Q93050 837 aa16.76■□□□□ 0.27
CDH1-202ENST00000422392 MRRFQ96E11 262 aaKnown RBP16.76■□□□□ 0.27
CDH1-202ENST00000422392 FAM81BQ96LP2 452 aa16.76■□□□□ 0.27
CDH1-202ENST00000422392 MYCBPQ99417 103 aaPredicted RBP16.76■□□□□ 0.27
CDH1-202ENST00000422392 ATP6V0A4Q9HBG4 840 aa16.76■□□□□ 0.27
CDH1-202ENST00000422392 DNPEPQ9ULA0 475 aa16.76■□□□□ 0.27
CDH1-202ENST00000422392 PARP14Q460N5 1801 aa16.76■□□□□ 0.27
CDH1-202ENST00000422392 ZBED4O75132 1171 aa16.76■□□□□ 0.27
CDH1-202ENST00000422392 ZC3H11AO75152 810 aaKnown RBP eCLIP16.76■□□□□ 0.27
CDH1-202ENST00000422392 SUN1O94901 812 aa16.76■□□□□ 0.27
CDH1-202ENST00000422392 EDN1P05305 212 aa16.76■□□□□ 0.27
CDH1-202ENST00000422392 CCND2P30279 289 aa16.76■□□□□ 0.27
CDH1-202ENST00000422392 PSMC4P43686 418 aa16.76■□□□□ 0.27
CDH1-202ENST00000422392 CXCL9Q07325 125 aa16.76■□□□□ 0.27
CDH1-202ENST00000422392 CUL2Q13617 745 aa16.76■□□□□ 0.27
CDH1-202ENST00000422392 SPATA21Q7Z572 469 aa16.76■□□□□ 0.27
CDH1-202ENST00000422392 OR5B17Q8NGF7 314 aa16.76■□□□□ 0.27
CDH1-202ENST00000422392 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.76■□□□□ 0.27
CDH1-202ENST00000422392 KIF9Q9HAQ2 790 aa16.76■□□□□ 0.27
CDH1-202ENST00000422392 L3MBTL1Q9Y468 752 aa16.76■□□□□ 0.27
CDH1-202ENST00000422392 NUB1Q9Y5A7 615 aa16.76■□□□□ 0.27
CDH1-202ENST00000422392 A8MUI8 341 aa16.75■□□□□ 0.27
CDH1-202ENST00000422392 RASA4BC9J798 803 aa16.75■□□□□ 0.27
CDH1-202ENST00000422392 RASA4O43374 803 aa16.75■□□□□ 0.27
CDH1-202ENST00000422392 KLRC2P26717 231 aa16.75■□□□□ 0.27
CDH1-202ENST00000422392 ACTR2P61160 394 aa16.75■□□□□ 0.27
CDH1-202ENST00000422392 MGAT5Q09328 741 aa16.75■□□□□ 0.27
CDH1-202ENST00000422392 ACCSLQ4AC99 568 aa16.75■□□□□ 0.27
CDH1-202ENST00000422392 SNRNP48Q6IEG0 339 aaKnown RBP16.75■□□□□ 0.27
CDH1-202ENST00000422392 ZNF677Q86XU0 584 aa16.75■□□□□ 0.27
CDH1-202ENST00000422392 ABRAQ8N0Z2 381 aa16.75■□□□□ 0.27
CDH1-202ENST00000422392 TTLL6Q8N841 843 aa16.75■□□□□ 0.27
CDH1-202ENST00000422392 CCDC89Q8N998 374 aa16.75■□□□□ 0.27
CDH1-202ENST00000422392 PRCCQ92733 491 aaPredicted RBP16.75■□□□□ 0.27
CDH1-202ENST00000422392 FAM212AQ96EL1 285 aa16.75■□□□□ 0.27
CDH1-202ENST00000422392 TEPSINQ96N21 525 aa16.75■□□□□ 0.27
CDH1-202ENST00000422392 C17orf75Q9HAS0 396 aa16.75■□□□□ 0.27
CDH1-202ENST00000422392 JPH1Q9HDC5 661 aaPredicted RBP16.75■□□□□ 0.27
CDH1-202ENST00000422392 MYOZ2Q9NPC6 264 aa16.75■□□□□ 0.27
CDH1-202ENST00000422392 IGF2BP3O00425 579 aaKnown RBP eCLIP16.75■□□□□ 0.27
CDH1-202ENST00000422392 PSTPIP1O43586 416 aa16.75■□□□□ 0.27
CDH1-202ENST00000422392 CDH16O75309 829 aa16.75■□□□□ 0.27
CDH1-202ENST00000422392 FOXN2P32314 431 aa16.75■□□□□ 0.27
CDH1-202ENST00000422392 MAGEA4P43358 317 aa16.75■□□□□ 0.27
CDH1-202ENST00000422392 PSMD6Q15008 389 aa16.75■□□□□ 0.27
CDH1-202ENST00000422392 LIN9Q5TKA1 542 aa16.75■□□□□ 0.27
CDH1-202ENST00000422392 TXNRD3NBQ6F5E7 133 aa16.75■□□□□ 0.27
CDH1-202ENST00000422392 RBBP8NLQ8NC74 664 aaPredicted RBP16.75■□□□□ 0.27
CDH1-202ENST00000422392 MCPH1Q8NEM0 835 aa16.75■□□□□ 0.27
CDH1-202ENST00000422392 SPOCK2Q92563 424 aa16.75■□□□□ 0.27
CDH1-202ENST00000422392 TRIM11Q96F44 468 aa16.75■□□□□ 0.27
CDH1-202ENST00000422392 SAYSD1Q9NPB0 183 aa16.75■□□□□ 0.27
CDH1-202ENST00000422392 MAP3K20Q9NYL2 800 aaKnown RBP16.75■□□□□ 0.27
CDH1-202ENST00000422392 RBAKQ9NYW8 714 aaPredicted RBP16.75■□□□□ 0.27
CDH1-202ENST00000422392 SLC9A2Q9UBY0 812 aa16.75■□□□□ 0.27
CDH1-202ENST00000422392 MCM8Q9UJA3 840 aa16.75■□□□□ 0.27
CDH1-202ENST00000422392 LRRIQ4A6NIV6 560 aa16.74■□□□□ 0.27
CDH1-202ENST00000422392 POC1B-GALNT4F8VUJ3 575 aa16.74■□□□□ 0.27
CDH1-202ENST00000422392 PSAPP07602 524 aa16.74■□□□□ 0.27
CDH1-202ENST00000422392 HMGB2P26583 209 aaKnown RBP16.74■□□□□ 0.27
CDH1-202ENST00000422392 CAV1Q03135 178 aa16.74■□□□□ 0.27
CDH1-202ENST00000422392 PTP4A2Q12974 167 aa16.74■□□□□ 0.27
CDH1-202ENST00000422392 ZNF394Q53GI3 561 aa16.74■□□□□ 0.27
CDH1-202ENST00000422392 KATNAL2Q8IYT4 538 aa16.74■□□□□ 0.27
CDH1-202ENST00000422392 ASAP3Q8TDY4 903 aa16.74■□□□□ 0.27
CDH1-202ENST00000422392 TARS2Q9BW92 718 aaKnown RBP16.74■□□□□ 0.27
CDH1-202ENST00000422392 NQO1P15559 274 aaKnown RBP16.74■□□□□ 0.27
CDH1-202ENST00000422392 ALDH5A1P51649 535 aaPredicted RBP16.74■□□□□ 0.27
CDH1-202ENST00000422392 POLGP54098 1239 aaPredicted RBP16.74■□□□□ 0.27
CDH1-202ENST00000422392 WDR4P57081 412 aaKnown RBP16.74■□□□□ 0.27
CDH1-202ENST00000422392 BPIFB4P59827 614 aa16.74■□□□□ 0.27
CDH1-202ENST00000422392 NFX1Q12986 1120 aaKnown RBP16.74■□□□□ 0.27
CDH1-202ENST00000422392 EMC2Q15006 297 aa16.74■□□□□ 0.27
CDH1-202ENST00000422392 MFSD7Q6UXD7 560 aa16.74■□□□□ 0.27
CDH1-202ENST00000422392 GPRASP2Q96D09 838 aa16.74■□□□□ 0.27
CDH1-202ENST00000422392 ZNF148Q9UQR1 794 aa16.74■□□□□ 0.27
CDH1-202ENST00000422392 STK38LQ9Y2H1 464 aa16.74■□□□□ 0.27
CDH1-202ENST00000422392 BANF1O75531 89 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 PIAS1O75925 651 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 GCAP28676 217 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 NOP14P78316 857 aaKnown RBP16.73■□□□□ 0.27
CDH1-202ENST00000422392 CLDN10P78369 228 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 SP2Q02086 613 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 STRN3Q13033 797 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 NEDD9Q14511 834 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 GALNTL6Q49A17 601 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 PLEKHA7Q6IQ23 1121 aa16.73■□□□□ 0.27
CDH1-202ENST00000422392 ZBED3Q96IU2 234 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms