RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 SAAL1Q96ER3 474 aa23.74■■□□□ 1.39
TRAF4-204ENST00000422344 BLZF1Q9H2G9 400 aa23.74■■□□□ 1.39
TRAF4-204ENST00000422344 WDR6Q9NNW5 1121 aaKnown RBP23.74■■□□□ 1.39
TRAF4-204ENST00000422344 C2CD2Q9Y426 696 aa23.74■■□□□ 1.39
TRAF4-204ENST00000422344 CLUHO75153 1309 aa23.74■■□□□ 1.39
TRAF4-204ENST00000422344 MTCL1Q9Y4B5 1905 aaKnown RBP23.74■■□□□ 1.39
TRAF4-204ENST00000422344 DENND4AQ7Z401 1863 aa23.73■■□□□ 1.39
TRAF4-204ENST00000422344 XYLBO75191 536 aa23.73■■□□□ 1.39
TRAF4-204ENST00000422344 SLC8B1Q6J4K2 584 aa23.73■■□□□ 1.39
TRAF4-204ENST00000422344 TMEM130Q8N3G9 435 aa23.73■■□□□ 1.39
TRAF4-204ENST00000422344 SLC7A14Q8TBB6 771 aa23.73■■□□□ 1.39
TRAF4-204ENST00000422344 CHAMP1Q96JM3 812 aa23.73■■□□□ 1.39
TRAF4-204ENST00000422344 SCAND2PQ9GZW5 306 aaPredicted RBP23.73■■□□□ 1.39
TRAF4-204ENST00000422344 MFSD1Q9H3U5 465 aa23.73■■□□□ 1.39
TRAF4-204ENST00000422344 C2orf16Q68DN1 1984 aa23.72■■□□□ 1.39
TRAF4-204ENST00000422344 EIF3DO15371 548 aaKnown RBP eCLIP23.72■■□□□ 1.39
TRAF4-204ENST00000422344 SLFN14P0C7P3 912 aa23.72■■□□□ 1.39
TRAF4-204ENST00000422344 PAX3P23760 479 aa23.72■■□□□ 1.39
TRAF4-204ENST00000422344 CMA1P23946 247 aa23.72■■□□□ 1.39
TRAF4-204ENST00000422344 GBP2P32456 591 aaPredicted RBP23.72■■□□□ 1.39
TRAF4-204ENST00000422344 ELF1P32519 619 aa23.72■■□□□ 1.39
TRAF4-204ENST00000422344 ROR1Q01973 937 aa23.72■■□□□ 1.39
TRAF4-204ENST00000422344 UVSSAQ2YD98 709 aa23.72■■□□□ 1.39
TRAF4-204ENST00000422344 ASTLQ6HA08 431 aaPredicted RBP23.72■■□□□ 1.39
TRAF4-204ENST00000422344 CRELD2Q6UXH1 353 aaPredicted RBP23.72■■□□□ 1.39
TRAF4-204ENST00000422344 USP37Q86T82 979 aa23.72■■□□□ 1.39
TRAF4-204ENST00000422344 CBWD1Q9BRT8 395 aa23.72■■□□□ 1.39
TRAF4-204ENST00000422344 RBAKQ9NYW8 714 aaPredicted RBP23.72■■□□□ 1.39
TRAF4-204ENST00000422344 SERTAD1Q9UHV2 236 aa23.72■■□□□ 1.39
TRAF4-204ENST00000422344 FBXL5Q9UKA1 691 aa23.72■■□□□ 1.39
TRAF4-204ENST00000422344 POLIQ9UNA4 740 aa23.72■■□□□ 1.39
TRAF4-204ENST00000422344 VPS13AQ96RL7 3174 aa23.72■■□□□ 1.39
TRAF4-204ENST00000422344 A0A1B0GVL5 298 aa23.71■■□□□ 1.39
TRAF4-204ENST00000422344 PROB1E7EW31 1015 aa23.71■■□□□ 1.39
TRAF4-204ENST00000422344 M0QZQ0 153 aa23.71■■□□□ 1.39
TRAF4-204ENST00000422344 KIAA0391O15091 583 aaKnown RBP23.71■■□□□ 1.39
TRAF4-204ENST00000422344 EXTL3O43909 919 aa23.71■■□□□ 1.39
TRAF4-204ENST00000422344 PAPLNO95428 1278 aa23.71■■□□□ 1.39
TRAF4-204ENST00000422344 PFKFB1P16118 471 aa23.71■■□□□ 1.39
TRAF4-204ENST00000422344 CASP1P29466 404 aa23.71■■□□□ 1.39
TRAF4-204ENST00000422344 HOXA9P31269 272 aa23.71■■□□□ 1.39
TRAF4-204ENST00000422344 YWHAHQ04917 246 aaPredicted RBP23.71■■□□□ 1.39
TRAF4-204ENST00000422344 C9orf57Q5W0N0 161 aa23.71■■□□□ 1.39
TRAF4-204ENST00000422344 RTL10Q7L3V2 364 aa23.71■■□□□ 1.39
TRAF4-204ENST00000422344 NT5DC4Q86YG4 428 aa23.71■■□□□ 1.39
TRAF4-204ENST00000422344 GLIS3Q8NEA6 775 aa23.71■■□□□ 1.39
TRAF4-204ENST00000422344 ZNF461Q8TAF7 563 aa23.71■■□□□ 1.39
TRAF4-204ENST00000422344 PCIF1Q9H4Z3 704 aa23.71■■□□□ 1.39
TRAF4-204ENST00000422344 DPP3Q9NY33 737 aa23.71■■□□□ 1.39
TRAF4-204ENST00000422344 USP25Q9UHP3 1055 aa23.71■■□□□ 1.39
TRAF4-204ENST00000422344 DMDP11532 3685 aa23.71■■□□□ 1.39
TRAF4-204ENST00000422344 FAM186AA6NE01 2351 aa23.7■■□□□ 1.38
TRAF4-204ENST00000422344 PVALEFA0A1B0GWK0 134 aa23.7■■□□□ 1.38
TRAF4-204ENST00000422344 ARHGEF37A1IGU5 675 aa23.7■■□□□ 1.38
TRAF4-204ENST00000422344 GOLGA8IPA6NC78 632 aa23.7■■□□□ 1.38
TRAF4-204ENST00000422344 GOLGA8JA6NMD2 632 aa23.7■■□□□ 1.38
TRAF4-204ENST00000422344 PRRG1O14668 218 aa23.7■■□□□ 1.38
TRAF4-204ENST00000422344 CCL16O15467 120 aa23.7■■□□□ 1.38
TRAF4-204ENST00000422344 AARSP49588 968 aaKnown RBP eCLIP23.7■■□□□ 1.38
TRAF4-204ENST00000422344 CUL4BQ13620 913 aa23.7■■□□□ 1.38
TRAF4-204ENST00000422344 MRPL58Q14197 206 aaKnown RBP23.7■■□□□ 1.38
TRAF4-204ENST00000422344 ASCL5Q7RTU5 278 aa23.7■■□□□ 1.38
TRAF4-204ENST00000422344 BRSK2Q8IWQ3 736 aa23.7■■□□□ 1.38
TRAF4-204ENST00000422344 GPD1LQ8N335 351 aa23.7■■□□□ 1.38
TRAF4-204ENST00000422344 UBE4BO95155 1302 aa23.69■■□□□ 1.38
TRAF4-204ENST00000422344 PPEF2O14830 753 aa23.69■■□□□ 1.38
TRAF4-204ENST00000422344 ODC1P11926 461 aa23.69■■□□□ 1.38
TRAF4-204ENST00000422344 CPB1P15086 417 aa23.69■■□□□ 1.38
TRAF4-204ENST00000422344 LILRA4P59901 499 aa23.69■■□□□ 1.38
TRAF4-204ENST00000422344 TFAMQ00059 246 aaKnown RBP23.69■■□□□ 1.38
TRAF4-204ENST00000422344 GET4Q7L5D6 327 aaPredicted RBP23.69■■□□□ 1.38
TRAF4-204ENST00000422344 GRAMD1CQ8IYS0 662 aa23.69■■□□□ 1.38
TRAF4-204ENST00000422344 OXCT2Q9BYC2 517 aaPredicted RBP23.69■■□□□ 1.38
TRAF4-204ENST00000422344 TIMM13Q9Y5L4 95 aaPredicted RBP23.69■■□□□ 1.38
TRAF4-204ENST00000422344 ANK1P16157 1881 aa23.68■■□□□ 1.38
TRAF4-204ENST00000422344 WDR27A2RRH5 827 aa23.68■■□□□ 1.38
TRAF4-204ENST00000422344 PIRO00625 290 aa23.68■■□□□ 1.38
TRAF4-204ENST00000422344 ACTN4O43707 911 aaKnown RBP23.68■■□□□ 1.38
TRAF4-204ENST00000422344 TBC1D4O60343 1298 aa23.68■■□□□ 1.38
TRAF4-204ENST00000422344 FSHRP23945 695 aa23.68■■□□□ 1.38
TRAF4-204ENST00000422344 TPGS2Q68CL5 300 aa23.68■■□□□ 1.38
TRAF4-204ENST00000422344 EPM2AIP1Q7L775 607 aaPredicted RBP23.68■■□□□ 1.38
TRAF4-204ENST00000422344 GRASPQ7Z6J2 395 aaPredicted RBP23.68■■□□□ 1.38
TRAF4-204ENST00000422344 EFCAB13Q8IY85 973 aa23.68■■□□□ 1.38
TRAF4-204ENST00000422344 ZSWIM2Q8NEG5 633 aa23.68■■□□□ 1.38
TRAF4-204ENST00000422344 FLCNQ8NFG4 579 aa23.68■■□□□ 1.38
TRAF4-204ENST00000422344 ZNF507Q8TCN5 953 aa23.68■■□□□ 1.38
TRAF4-204ENST00000422344 CACTINQ8WUQ7 758 aaKnown RBP23.68■■□□□ 1.38
TRAF4-204ENST00000422344 PAGE5Q96GU1 130 aa23.68■■□□□ 1.38
TRAF4-204ENST00000422344 CYP4F11Q9HBI6 524 aa23.68■■□□□ 1.38
TRAF4-204ENST00000422344 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.68■■□□□ 1.386e-10■□□□□ 8.2
TRAF4-204ENST00000422344 ANO9A1A5B4 782 aa23.67■■□□□ 1.38
TRAF4-204ENST00000422344 ABLIM3O94929 683 aa23.67■■□□□ 1.38
TRAF4-204ENST00000422344 OAZ2O95190 189 aa23.67■■□□□ 1.38
TRAF4-204ENST00000422344 LRG1P02750 347 aa23.67■■□□□ 1.38
TRAF4-204ENST00000422344 POU2F2P09086 479 aa23.67■■□□□ 1.38
TRAF4-204ENST00000422344 ATF2P15336 505 aa23.67■■□□□ 1.38
TRAF4-204ENST00000422344 TYMPP19971 482 aa23.67■■□□□ 1.38
TRAF4-204ENST00000422344 NBL1P41271 181 aa23.67■■□□□ 1.38
TRAF4-204ENST00000422344 SYKP43405 635 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms