RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 DDX23Q9BUQ8 820 aaKnown RBP12.55□□□□□ -0.4
SQSTM1-203ENST00000422245 FOXQ1Q9C009 403 aa12.55□□□□□ -0.4
SQSTM1-203ENST00000422245 SEMA4AQ9H3S1 761 aa12.55□□□□□ -0.4
SQSTM1-203ENST00000422245 ST6GALNAC4Q9H4F1 302 aa12.55□□□□□ -0.4
SQSTM1-203ENST00000422245 ASAH2Q9NR71 780 aa12.55□□□□□ -0.4
SQSTM1-203ENST00000422245 CCDC39Q9UFE4 941 aa12.55□□□□□ -0.4
SQSTM1-203ENST00000422245 CPSF3Q9UKF6 684 aaKnown RBP12.55□□□□□ -0.4
SQSTM1-203ENST00000422245 DERAQ9Y315 318 aa12.55□□□□□ -0.4
SQSTM1-203ENST00000422245 YIPF1Q9Y548 306 aa12.55□□□□□ -0.4
SQSTM1-203ENST00000422245 MYO15AQ9UKN7 3530 aa12.54□□□□□ -0.4
SQSTM1-203ENST00000422245 ODC1P11926 461 aa12.54□□□□□ -0.4
SQSTM1-203ENST00000422245 NMT1P30419 496 aaKnown RBP12.54□□□□□ -0.4
SQSTM1-203ENST00000422245 DDIT3P35638 169 aa12.54□□□□□ -0.4
SQSTM1-203ENST00000422245 MAGEA9P43362 315 aa12.54□□□□□ -0.4
SQSTM1-203ENST00000422245 GUCY2FP51841 1108 aa12.54□□□□□ -0.4
SQSTM1-203ENST00000422245 EPHA5P54756 1037 aa12.54□□□□□ -0.4
SQSTM1-203ENST00000422245 TMEM132DQ14C87 1099 aa12.54□□□□□ -0.4
SQSTM1-203ENST00000422245 PTPAQ15257 358 aa12.54□□□□□ -0.4
SQSTM1-203ENST00000422245 SLC44A4Q53GD3 710 aa12.54□□□□□ -0.4
SQSTM1-203ENST00000422245 SLFN12LQ6IEE8 588 aa12.54□□□□□ -0.4
SQSTM1-203ENST00000422245 ZC3H14Q6PJT7 736 aaKnown RBP12.54□□□□□ -0.4
SQSTM1-203ENST00000422245 DSTYKQ6XUX3 929 aa12.54□□□□□ -0.4
SQSTM1-203ENST00000422245 DNASE1L2Q92874 299 aa12.54□□□□□ -0.4
SQSTM1-203ENST00000422245 ZNF512Q96ME7 567 aaPredicted RBP12.54□□□□□ -0.4
SQSTM1-203ENST00000422245 BCO2Q9BYV7 579 aa12.54□□□□□ -0.4
SQSTM1-203ENST00000422245 OSBPL6Q9BZF3 934 aa12.54□□□□□ -0.4
SQSTM1-203ENST00000422245 FBXO2Q9UK22 296 aaPredicted RBP12.54□□□□□ -0.4
SQSTM1-203ENST00000422245 C2CD2Q9Y426 696 aa12.54□□□□□ -0.4
SQSTM1-203ENST00000422245 NFICP08651 508 aa12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 FCARP24071 287 aa12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 POU5F1Q01860 360 aaKnown RBP12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 RESTQ13127 1097 aa12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 GPR17Q13304 367 aa12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 MYBPC2Q14324 1141 aa12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 UBXN2BQ14CS0 331 aa12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 FAM78AQ5JUQ0 283 aa12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 ADALQ6DHV7 355 aa12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 OVOS1Q6IE37 1185 aa12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 JADE1Q6IE81 842 aa12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 RNF19BQ6ZMZ0 732 aa12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 SFR1Q86XK3 245 aa12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 C1orf210Q8IVY1 113 aa12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 TMEM130Q8N3G9 435 aa12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 SMARCD2Q92925 531 aa12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 TCEAL4Q96EI5 215 aa12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 FAM212AQ96EL1 285 aa12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 EPSTI1Q96J88 318 aa12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 ASB16Q96NS5 453 aa12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 ASB7Q9H672 318 aa12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 ZFP14Q9HCL3 533 aa12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 LTB4R2Q9NPC1 389 aa12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 CEP72Q9P209 647 aa12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 SEL1LQ9UBV2 794 aa12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 TIMM13Q9Y5L4 95 aaPredicted RBP12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 SRPRBQ9Y5M8 271 aaKnown RBP12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 CLIC4Q9Y696 253 aa12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 STYXL1Q9Y6J8 313 aa12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 MORC2Q9Y6X9 1032 aaPredicted RBP12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 PATJQ8NI35 1801 aa12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 ANK1P16157 1881 aa12.53□□□□□ -0.4
SQSTM1-203ENST00000422245 FANCMQ8IYD8 2048 aa12.52□□□□□ -0.4
SQSTM1-203ENST00000422245 SPTBN4Q9H254 2564 aa12.52□□□□□ -0.4
SQSTM1-203ENST00000422245 PPEF2O14830 753 aa12.52□□□□□ -0.41
SQSTM1-203ENST00000422245 GLULP15104 373 aa12.52□□□□□ -0.41
SQSTM1-203ENST00000422245 GAP43P17677 238 aa12.52□□□□□ -0.41
SQSTM1-203ENST00000422245 CCR2P41597 374 aa12.52□□□□□ -0.41
SQSTM1-203ENST00000422245 LILRA4P59901 499 aa12.52□□□□□ -0.41
SQSTM1-203ENST00000422245 ZC2HC1CQ53FD0 456 aaPredicted RBP12.52□□□□□ -0.41
SQSTM1-203ENST00000422245 C9orf57Q5W0N0 161 aa12.52□□□□□ -0.41
SQSTM1-203ENST00000422245 TANGO2Q6ICL3 276 aa12.52□□□□□ -0.41
SQSTM1-203ENST00000422245 ARMCX5Q6P1M9 558 aa12.52□□□□□ -0.41
SQSTM1-203ENST00000422245 TPRG1Q6ZUI0 275 aa12.52□□□□□ -0.41
SQSTM1-203ENST00000422245 DEPDC1BQ8WUY9 529 aa12.52□□□□□ -0.41
SQSTM1-203ENST00000422245 INTS4Q96HW7 963 aaKnown RBP12.52□□□□□ -0.41
SQSTM1-203ENST00000422245 PGLYRP2Q96PD5 576 aa12.52□□□□□ -0.41
SQSTM1-203ENST00000422245 NELL2Q99435 816 aa12.52□□□□□ -0.41
SQSTM1-203ENST00000422245 AGO2Q9UKV8 859 aaKnown RBP12.52□□□□□ -0.41
SQSTM1-203ENST00000422245 DSEQ9UL01 958 aa12.52□□□□□ -0.41
SQSTM1-203ENST00000422245 EXOC7Q9UPT5 735 aa12.52□□□□□ -0.41
SQSTM1-203ENST00000422245 MRPS17Q9Y2R5 130 aaKnown RBP12.52□□□□□ -0.41
SQSTM1-203ENST00000422245 TSC2P49815 1807 aa12.52□□□□□ -0.41
SQSTM1-203ENST00000422245 ANO9A1A5B4 782 aa12.51□□□□□ -0.41
SQSTM1-203ENST00000422245 MTMR11A4FU01 709 aa12.51□□□□□ -0.41
SQSTM1-203ENST00000422245 FAM170BA6NMN3 283 aa12.51□□□□□ -0.41
SQSTM1-203ENST00000422245 ANKRD63C9JTQ0 380 aa12.51□□□□□ -0.41
SQSTM1-203ENST00000422245 PIRO00625 290 aa12.51□□□□□ -0.41
SQSTM1-203ENST00000422245 NCAM2O15394 837 aa12.51□□□□□ -0.41
SQSTM1-203ENST00000422245 PPP1R37O75864 691 aa12.51□□□□□ -0.41
SQSTM1-203ENST00000422245 VNN2O95498 520 aa12.51□□□□□ -0.41
SQSTM1-203ENST00000422245 OR4Q2P0C623 313 aa12.51□□□□□ -0.41
SQSTM1-203ENST00000422245 SP9P0CG40 484 aa12.51□□□□□ -0.41
SQSTM1-203ENST00000422245 MYL4P12829 197 aa12.51□□□□□ -0.41
SQSTM1-203ENST00000422245 SYT1P21579 422 aa12.51□□□□□ -0.41
SQSTM1-203ENST00000422245 ACOT2P49753 483 aa12.51□□□□□ -0.41
SQSTM1-203ENST00000422245 EPHB3P54753 998 aa12.51□□□□□ -0.41
SQSTM1-203ENST00000422245 POSTNQ15063 836 aa12.51□□□□□ -0.41
SQSTM1-203ENST00000422245 RRAGBQ5VZM2 374 aa12.51□□□□□ -0.41
SQSTM1-203ENST00000422245 POTEHQ6S545 545 aa12.51□□□□□ -0.41
SQSTM1-203ENST00000422245 ZNF852Q6ZMS4 543 aa12.51□□□□□ -0.41
SQSTM1-203ENST00000422245 CCDC73Q6ZRK6 1079 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms