RNA–Protein interactions for RNA: ENST00000422070.8

RBFOX1-204, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-204ENST00000422070 TTC7AQ9ULT0 858 aaPredicted RBP20.14■□□□□ 0.81
RBFOX1-204ENST00000422070 ADAMTS4O75173 837 aa20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 CLSTN1O94985 981 aa20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 NPTXRO95502 500 aa20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 ITGB3P05106 788 aa20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 P4HA1P13674 534 aa20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 FGFR4P22455 802 aa20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 CST5P28325 142 aaPredicted RBP20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 CCDC70Q6NSX1 233 aa20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 MON1BQ7L1V2 547 aa20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 SESTD1Q86VW0 696 aa20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 ZNF564Q8TBZ8 553 aaPredicted RBP20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 ZNF606Q8WXB4 792 aa20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 SNX27Q96L92 541 aa20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 CARD9Q9H257 536 aa20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 CREBZFQ9NS37 354 aa20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 PCDHGC3Q9UN70 934 aa20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 GINS2Q9Y248 185 aa20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 CITO14578 2027 aa20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 THAP12O43422 761 aa20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 KRT19P08727 400 aa20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 CDH5P33151 784 aaPredicted RBP20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 CACNB2Q08289 660 aaPredicted RBP20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 RPAINQ86UA6 219 aa20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 TTC39CQ8N584 583 aa20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 TMEM40Q8WWA1 233 aa20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 NUP85Q9BW27 656 aa20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 ZNF518BQ9C0D4 1074 aa20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 PDCL3Q9H2J4 239 aa20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 CNOT8Q9UFF9 292 aaKnown RBP20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 TMEM59LQ9UK28 342 aa20.13■□□□□ 0.81
RBFOX1-204ENST00000422070 DDX3YO15523 660 aaKnown RBP20.12■□□□□ 0.81
RBFOX1-204ENST00000422070 AOC2O75106 756 aa20.12■□□□□ 0.81
RBFOX1-204ENST00000422070 PAEPP09466 180 aa20.12■□□□□ 0.81
RBFOX1-204ENST00000422070 RHOXF2BP0C7M4 288 aa20.12■□□□□ 0.81
RBFOX1-204ENST00000422070 YARSP54577 528 aaKnown RBP20.12■□□□□ 0.81
RBFOX1-204ENST00000422070 RBP5P82980 135 aa20.12■□□□□ 0.81
RBFOX1-204ENST00000422070 ZNF200P98182 395 aaPredicted RBP20.12■□□□□ 0.81
RBFOX1-204ENST00000422070 C1QBPQ07021 282 aaKnown RBP20.12■□□□□ 0.81
RBFOX1-204ENST00000422070 C2orf54Q08AI8 447 aa20.12■□□□□ 0.81
RBFOX1-204ENST00000422070 CLUL1Q15846 466 aa20.12■□□□□ 0.81
RBFOX1-204ENST00000422070 GLE1Q53GS7 698 aaKnown RBP20.12■□□□□ 0.81
RBFOX1-204ENST00000422070 TMCO3Q6UWJ1 677 aa20.12■□□□□ 0.81
RBFOX1-204ENST00000422070 USP38Q8NB14 1042 aa20.12■□□□□ 0.81
RBFOX1-204ENST00000422070 CYFIP2Q96F07 1278 aa20.12■□□□□ 0.81
RBFOX1-204ENST00000422070 MS4A14Q96JA4 679 aa20.12■□□□□ 0.81
RBFOX1-204ENST00000422070 PNKPQ96T60 521 aa20.12■□□□□ 0.81
RBFOX1-204ENST00000422070 RHOXF2Q9BQY4 288 aa20.12■□□□□ 0.81
RBFOX1-204ENST00000422070 CNTN3Q9P232 1028 aa20.12■□□□□ 0.81
RBFOX1-204ENST00000422070 ALG6Q9Y672 507 aa20.12■□□□□ 0.81
RBFOX1-204ENST00000422070 ZRANB2O95218 330 aaKnown RBP eCLIP20.11■□□□□ 0.81
RBFOX1-204ENST00000422070 ZBTB6Q15916 424 aa20.11■□□□□ 0.81
RBFOX1-204ENST00000422070 WDR72Q3MJ13 1102 aa20.11■□□□□ 0.81
RBFOX1-204ENST00000422070 NAA35Q5VZE5 725 aa20.11■□□□□ 0.81
RBFOX1-204ENST00000422070 ALKAL1Q6UXT8 129 aa20.11■□□□□ 0.81
RBFOX1-204ENST00000422070 KLHDC9Q8NEP7 349 aa20.11■□□□□ 0.81
RBFOX1-204ENST00000422070 EIF2AQ9BY44 585 aaKnown RBP20.11■□□□□ 0.81
RBFOX1-204ENST00000422070 CELF4Q9BZC1 486 aaKnown RBP20.11■□□□□ 0.81
RBFOX1-204ENST00000422070 DPP3Q9NY33 737 aa20.11■□□□□ 0.81
RBFOX1-204ENST00000422070 PGRMC1O00264 195 aaKnown RBP20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 ATP8B1O43520 1251 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 CALCAP01258 141 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 POLR2BP30876 1174 aaKnown RBP20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 XKR4Q5GH76 650 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 CC2D1AQ6P1N0 951 aaPredicted RBP20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 PPP1R13LQ8WUF5 828 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 KIF12Q96FN5 646 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 WNT8AQ9H1J5 351 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 SNTG2Q9NY99 539 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 NXF1Q9UBU9 619 aaKnown RBP20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 ATMINO43313 823 aaPredicted RBP20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 ERLIN1O75477 346 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 PGK1P00558 417 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 WEE2P0C1S8 567 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 CD58P19256 250 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 HOXD10P28358 340 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 DNA2P51530 1060 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 INCA1Q0VD86 236 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 PTP4A2Q12974 167 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 NBPF20Q3BBV1 942 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 MAP3K21Q5TCX8 1036 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 LIN9Q5TKA1 542 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 CXCL17Q6UXB2 119 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 RSPH3Q86UC2 560 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 CPA5Q8WXQ8 436 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 CD101Q93033 1021 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 HPDLQ96IR7 371 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 TRIM6Q9C030 488 aaPredicted RBP20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 ARFGAP3Q9NP61 516 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 XPNPEP3Q9NQH7 507 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 ZNF446Q9NWS9 450 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 EHD2Q9NZN4 543 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 SRRDQ9UH36 339 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 POLIQ9UNA4 740 aa20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 PIN4Q9Y237 131 aaKnown RBP20.1■□□□□ 0.81
RBFOX1-204ENST00000422070 THSD7BQ9C0I4 1608 aa20.09■□□□□ 0.81
RBFOX1-204ENST00000422070 TRIP12Q14669 1992 aaPredicted RBP20.09■□□□□ 0.81
RBFOX1-204ENST00000422070 M0QZ92 97 aa20.09■□□□□ 0.81
RBFOX1-204ENST00000422070 MED7O43513 233 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms