RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 CNOT6LQ96LI5 555 aaKnown RBP13.2□□□□□ -0.3
UFD1-203ENST00000421968 FNBP1Q96RU3 617 aa13.2□□□□□ -0.3
UFD1-203ENST00000421968 CAPN10Q9HC96 672 aa13.2□□□□□ -0.3
UFD1-203ENST00000421968 GKN1Q9NS71 199 aa13.2□□□□□ -0.3
UFD1-203ENST00000421968 TPCN1Q9ULQ1 816 aa13.2□□□□□ -0.3
UFD1-203ENST00000421968 PCDH15Q96QU1 1955 aa13.2□□□□□ -0.3
UFD1-203ENST00000421968 MUC22E2RYF6 1773 aaPredicted RBP13.2□□□□□ -0.3
UFD1-203ENST00000421968 TSC2P49815 1807 aa13.19□□□□□ -0.3
UFD1-203ENST00000421968 FAM149AA5PLN7 773 aa13.19□□□□□ -0.3
UFD1-203ENST00000421968 ERVH48-1M5A8F1 160 aa13.19□□□□□ -0.3
UFD1-203ENST00000421968 RRP8O43159 456 aaKnown RBP13.19□□□□□ -0.3
UFD1-203ENST00000421968 B3GAT3O94766 335 aa13.19□□□□□ -0.3
UFD1-203ENST00000421968 THP07101 528 aa13.19□□□□□ -0.3
UFD1-203ENST00000421968 SYPP08247 313 aa13.19□□□□□ -0.3
UFD1-203ENST00000421968 IGFBP6P24592 240 aaPredicted RBP13.19□□□□□ -0.3
UFD1-203ENST00000421968 U2AF2P26368 475 aaKnown RBP eCLIP13.19□□□□□ -0.33e-8■■■■□ 20.2
UFD1-203ENST00000421968 MCM2P49736 904 aa13.19□□□□□ -0.3
UFD1-203ENST00000421968 PDE1AP54750 535 aa13.19□□□□□ -0.3
UFD1-203ENST00000421968 RUNX3Q13761 415 aa13.19□□□□□ -0.3
UFD1-203ENST00000421968 PCBP1Q15365 356 aaKnown RBP eCLIP13.19□□□□□ -0.3
UFD1-203ENST00000421968 PEAR1Q5VY43 1037 aaPredicted RBP13.19□□□□□ -0.3
UFD1-203ENST00000421968 JAKMIP3Q5VZ66 844 aa13.19□□□□□ -0.3
UFD1-203ENST00000421968 RALYLQ86SE5 291 aaKnown RBP13.19□□□□□ -0.3
UFD1-203ENST00000421968 GLRX5Q86SX6 157 aa13.19□□□□□ -0.3
UFD1-203ENST00000421968 CDR2LQ86X02 465 aaPredicted RBP13.19□□□□□ -0.3
UFD1-203ENST00000421968 GALNT15Q8N3T1 639 aa13.19□□□□□ -0.3
UFD1-203ENST00000421968 MDGA1Q8NFP4 955 aa13.19□□□□□ -0.3
UFD1-203ENST00000421968 SLC7A3Q8WY07 619 aa13.19□□□□□ -0.3
UFD1-203ENST00000421968 SPACA7Q96KW9 195 aa13.19□□□□□ -0.3
UFD1-203ENST00000421968 P2RY13Q9BPV8 354 aa13.19□□□□□ -0.3
UFD1-203ENST00000421968 AHCTF1Q8WYP5 2266 aa13.18□□□□□ -0.3
UFD1-203ENST00000421968 PTPRDP23468 1912 aa13.18□□□□□ -0.3
UFD1-203ENST00000421968 SMCO2A6NFE2 343 aa13.18□□□□□ -0.3
UFD1-203ENST00000421968 OTOL1A6NHN0 477 aaPredicted RBP13.18□□□□□ -0.3
UFD1-203ENST00000421968 I3L4J1 428 aa13.18□□□□□ -0.3
UFD1-203ENST00000421968 INO80B-WBP1J3KQ70 363 aa13.18□□□□□ -0.3
UFD1-203ENST00000421968 PTGESO14684 152 aa13.18□□□□□ -0.3
UFD1-203ENST00000421968 GAS7O60861 476 aa13.18□□□□□ -0.3
UFD1-203ENST00000421968 ARF4P18085 180 aaPredicted RBP13.18□□□□□ -0.3
UFD1-203ENST00000421968 RXRAP19793 462 aa13.18□□□□□ -0.3
UFD1-203ENST00000421968 P2RY2P41231 377 aa13.18□□□□□ -0.3
UFD1-203ENST00000421968 CLK2P49760 499 aaKnown RBP13.18□□□□□ -0.3
UFD1-203ENST00000421968 PLA2G4FQ68DD2 849 aa13.18□□□□□ -0.3
UFD1-203ENST00000421968 LMBRD2Q68DH5 695 aaPredicted RBP13.18□□□□□ -0.3
UFD1-203ENST00000421968 FMNL3Q8IVF7 1028 aa13.18□□□□□ -0.3
UFD1-203ENST00000421968 FRMD1Q8N878 549 aa13.18□□□□□ -0.3
UFD1-203ENST00000421968 IGDCC4Q8TDY8 1250 aa13.18□□□□□ -0.3
UFD1-203ENST00000421968 CRYGNQ8WXF5 182 aa13.18□□□□□ -0.3
UFD1-203ENST00000421968 EXOC4Q96A65 974 aa13.18□□□□□ -0.3
UFD1-203ENST00000421968 UNC45AQ9H3U1 944 aa13.18□□□□□ -0.3
UFD1-203ENST00000421968 NXF1Q9UBU9 619 aaKnown RBP13.18□□□□□ -0.3
UFD1-203ENST00000421968 ZBTB47Q9UFB7 747 aaPredicted RBP13.18□□□□□ -0.3
UFD1-203ENST00000421968 NUP210Q8TEM1 1887 aaPredicted RBP13.18□□□□□ -0.3
UFD1-203ENST00000421968 COL5A1P20908 1838 aaPredicted RBP13.18□□□□□ -0.3
UFD1-203ENST00000421968 TRAPPC3O43617 180 aa13.17□□□□□ -0.3
UFD1-203ENST00000421968 PRAMEF12O95522 483 aa13.17□□□□□ -0.3
UFD1-203ENST00000421968 NBR1Q14596 966 aa13.17□□□□□ -0.3
UFD1-203ENST00000421968 SPDYCQ5MJ68 293 aa13.17□□□□□ -0.3
UFD1-203ENST00000421968 TPGS2Q68CL5 300 aa13.17□□□□□ -0.3
UFD1-203ENST00000421968 NAIF1Q69YI7 327 aaPredicted RBP13.17□□□□□ -0.3
UFD1-203ENST00000421968 PPP1R18Q6NYC8 613 aa13.17□□□□□ -0.3
UFD1-203ENST00000421968 SLC27A1Q6PCB7 646 aa13.17□□□□□ -0.3
UFD1-203ENST00000421968 ANO5Q75V66 913 aa13.17□□□□□ -0.3
UFD1-203ENST00000421968 MIER3Q7Z3K6 550 aa13.17□□□□□ -0.3
UFD1-203ENST00000421968 RABEPKQ7Z6M1 372 aa13.17□□□□□ -0.3
UFD1-203ENST00000421968 OLIG1Q8TAK6 271 aa13.17□□□□□ -0.3
UFD1-203ENST00000421968 SPIRE2Q8WWL2 714 aa13.17□□□□□ -0.3
UFD1-203ENST00000421968 SEMA4CQ9C0C4 833 aa13.17□□□□□ -0.3
UFD1-203ENST00000421968 EBF3Q9H4W6 596 aa13.17□□□□□ -0.3
UFD1-203ENST00000421968 HPS4Q9NQG7 708 aa13.17□□□□□ -0.3
UFD1-203ENST00000421968 DIAPH3Q9NSV4 1193 aa13.17□□□□□ -0.3
UFD1-203ENST00000421968 BMP2KQ9NSY1 1161 aaPredicted RBP13.17□□□□□ -0.3
UFD1-203ENST00000421968 KCNK4Q9NYG8 393 aa13.17□□□□□ -0.3
UFD1-203ENST00000421968 MYO16Q9Y6X6 1858 aa13.16□□□□□ -0.3
UFD1-203ENST00000421968 CEP192Q8TEP8 1941 aa13.16□□□□□ -0.3
UFD1-203ENST00000421968 FAM205CA6NFA0 338 aa13.16□□□□□ -0.3
UFD1-203ENST00000421968 ASAP2O43150 1006 aa13.16□□□□□ -0.3
UFD1-203ENST00000421968 CBFA2T3O75081 653 aa13.16□□□□□ -0.3
UFD1-203ENST00000421968 GJB3O75712 270 aa13.16□□□□□ -0.3
UFD1-203ENST00000421968 C6P13671 934 aa13.16□□□□□ -0.3
UFD1-203ENST00000421968 HLA-EP13747 358 aa13.16□□□□□ -0.3
UFD1-203ENST00000421968 BRCC3P46736 316 aa13.16□□□□□ -0.3
UFD1-203ENST00000421968 NPEPPSP55786 919 aa13.16□□□□□ -0.3
UFD1-203ENST00000421968 CXADRP78310 365 aa13.16□□□□□ -0.3
UFD1-203ENST00000421968 C2orf27AQ580R0 203 aa13.16□□□□□ -0.3
UFD1-203ENST00000421968 GPR158Q5T848 1215 aa13.16□□□□□ -0.3
UFD1-203ENST00000421968 TRIM68Q6AZZ1 485 aa13.16□□□□□ -0.3
UFD1-203ENST00000421968 NFXL1Q6ZNB6 911 aa13.16□□□□□ -0.3
UFD1-203ENST00000421968 NCOA7Q8NI08 942 aa13.16□□□□□ -0.3
UFD1-203ENST00000421968 SETD7Q8WTS6 366 aaKnown RBP13.16□□□□□ -0.3
UFD1-203ENST00000421968 FAM83CQ9BQN1 747 aa13.16□□□□□ -0.3
UFD1-203ENST00000421968 POLR3CQ9BUI4 534 aaPredicted RBP13.16□□□□□ -0.3
UFD1-203ENST00000421968 TEKT3Q9BXF9 490 aa13.16□□□□□ -0.3
UFD1-203ENST00000421968 LRRC3Q9BY71 257 aa13.16□□□□□ -0.3
UFD1-203ENST00000421968 GLT8D2Q9H1C3 349 aa13.16□□□□□ -0.3
UFD1-203ENST00000421968 ATXN3LQ9H3M9 355 aa13.16□□□□□ -0.3
UFD1-203ENST00000421968 IL17BQ9UHF5 180 aa13.16□□□□□ -0.3
UFD1-203ENST00000421968 PCOLCE2Q9UKZ9 415 aa13.16□□□□□ -0.3
UFD1-203ENST00000421968 GOLGA8CPA6NN73 597 aa13.15□□□□□ -0.3
UFD1-203ENST00000421968 TMEM189-UBE2V1I3L0A0 370 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms