RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 MSRAQ9UJ68 235 aa16.89■□□□□ 0.3
DDX55-203ENST00000421670 ADAM28Q9UKQ2 775 aa16.89■□□□□ 0.3
DDX55-203ENST00000421670 NUB1Q9Y5A7 615 aa16.89■□□□□ 0.3
DDX55-203ENST00000421670 GTPBP10A4D1E9 387 aaKnown RBP16.89■□□□□ 0.29
DDX55-203ENST00000421670 GOLGA6L3A6NEY3 463 aa16.89■□□□□ 0.29
DDX55-203ENST00000421670 TMEM189-UBE2V1I3L0A0 370 aa16.89■□□□□ 0.29
DDX55-203ENST00000421670 DNAJB2P25686 324 aa16.89■□□□□ 0.29
DDX55-203ENST00000421670 PNPLA4P41247 253 aa16.89■□□□□ 0.29
DDX55-203ENST00000421670 TAP1Q03518 808 aa16.89■□□□□ 0.29
DDX55-203ENST00000421670 KCNMA1Q12791 1236 aa16.89■□□□□ 0.29
DDX55-203ENST00000421670 MYO1EQ12965 1108 aa16.89■□□□□ 0.29
DDX55-203ENST00000421670 NR1I3Q14994 352 aa16.89■□□□□ 0.29
DDX55-203ENST00000421670 SYCP1Q15431 976 aa16.89■□□□□ 0.29
DDX55-203ENST00000421670 RAB30Q15771 203 aa16.89■□□□□ 0.29
DDX55-203ENST00000421670 SV2CQ496J9 727 aa16.89■□□□□ 0.29
DDX55-203ENST00000421670 TRIM65Q6PJ69 517 aa16.89■□□□□ 0.29
DDX55-203ENST00000421670 SARM1Q6SZW1 724 aa16.89■□□□□ 0.29
DDX55-203ENST00000421670 SCARA5Q6ZMJ2 495 aa16.89■□□□□ 0.29
DDX55-203ENST00000421670 SLC39A11Q8N1S5 342 aa16.89■□□□□ 0.29
DDX55-203ENST00000421670 COLEC11Q9BWP8 271 aa16.89■□□□□ 0.29
DDX55-203ENST00000421670 FSD2A1L4K1 749 aa16.88■□□□□ 0.29
DDX55-203ENST00000421670 KPNA7A9QM74 516 aa16.88■□□□□ 0.29
DDX55-203ENST00000421670 TADA2AO75478 443 aa16.88■□□□□ 0.29
DDX55-203ENST00000421670 PON1P27169 355 aa16.88■□□□□ 0.29
DDX55-203ENST00000421670 ATICP31939 592 aa16.88■□□□□ 0.29
DDX55-203ENST00000421670 SGSM1Q2NKQ1 1148 aa16.88■□□□□ 0.29
DDX55-203ENST00000421670 UVSSAQ2YD98 709 aa16.88■□□□□ 0.29
DDX55-203ENST00000421670 WDR72Q3MJ13 1102 aa16.88■□□□□ 0.29
DDX55-203ENST00000421670 TIGD5Q53EQ6 642 aa16.88■□□□□ 0.29
DDX55-203ENST00000421670 PPP2R2DQ66LE6 453 aa16.88■□□□□ 0.29
DDX55-203ENST00000421670 EHBP1Q8NDI1 1231 aa16.88■□□□□ 0.29
DDX55-203ENST00000421670 IGSF21Q96ID5 467 aa16.88■□□□□ 0.29
DDX55-203ENST00000421670 TRIM5Q9C035 493 aa16.88■□□□□ 0.29
DDX55-203ENST00000421670 AAASQ9NRG9 546 aa16.88■□□□□ 0.29
DDX55-203ENST00000421670 NXF1Q9UBU9 619 aaKnown RBP16.88■□□□□ 0.29
DDX55-203ENST00000421670 POLIQ9UNA4 740 aa16.88■□□□□ 0.29
DDX55-203ENST00000421670 SIK3Q9Y2K2 1263 aa16.88■□□□□ 0.29
DDX55-203ENST00000421670 PCDHB12Q9Y5F1 795 aa16.88■□□□□ 0.29
DDX55-203ENST00000421670 SNX9Q9Y5X1 595 aa16.88■□□□□ 0.29
DDX55-203ENST00000421670 A0A1W2PPC1 479 aa16.87■□□□□ 0.29
DDX55-203ENST00000421670 STAU1O95793 577 aaKnown RBP16.87■□□□□ 0.29
DDX55-203ENST00000421670 SMAD3P84022 425 aaKnown RBP16.87■□□□□ 0.29
DDX55-203ENST00000421670 ZNF667Q5HYK9 610 aa16.87■□□□□ 0.29
DDX55-203ENST00000421670 ARHGEF19Q8IW93 802 aa16.87■□□□□ 0.29
DDX55-203ENST00000421670 CCDC150Q8NCX0 1101 aa16.87■□□□□ 0.29
DDX55-203ENST00000421670 TATDN2Q93075 761 aa16.87■□□□□ 0.29
DDX55-203ENST00000421670 PCMTD1Q96MG8 357 aaPredicted RBP16.87■□□□□ 0.29
DDX55-203ENST00000421670 ERGIC2Q96RQ1 377 aa16.87■□□□□ 0.29
DDX55-203ENST00000421670 LSM14BQ9BX40 385 aaKnown RBP16.87■□□□□ 0.29
DDX55-203ENST00000421670 VN1R3Q9BXE9 311 aa16.87■□□□□ 0.29
DDX55-203ENST00000421670 GPR62Q9BZJ7 368 aa16.87■□□□□ 0.29
DDX55-203ENST00000421670 VRTNQ9H8Y1 702 aa16.87■□□□□ 0.29
DDX55-203ENST00000421670 CERS4Q9HA82 394 aa16.87■□□□□ 0.29
DDX55-203ENST00000421670 GRPEL1Q9HAV7 217 aa16.87■□□□□ 0.29
DDX55-203ENST00000421670 SIX2Q9NPC8 291 aa16.87■□□□□ 0.29
DDX55-203ENST00000421670 SPG21Q9NZD8 308 aa16.87■□□□□ 0.29
DDX55-203ENST00000421670 MYO9BQ13459 2157 aa16.87■□□□□ 0.29
DDX55-203ENST00000421670 SF3B1O75533 1304 aaKnown RBP eCLIP16.86■□□□□ 0.29
DDX55-203ENST00000421670 CBFA2T2O43439 604 aa16.86■□□□□ 0.29
DDX55-203ENST00000421670 PPM1AP35813 382 aa16.86■□□□□ 0.29
DDX55-203ENST00000421670 BMPR1AP36894 532 aa16.86■□□□□ 0.29
DDX55-203ENST00000421670 AARSP49588 968 aaKnown RBP eCLIP16.86■□□□□ 0.29
DDX55-203ENST00000421670 TNNC1P63316 161 aa16.86■□□□□ 0.29
DDX55-203ENST00000421670 WDR44Q5JSH3 913 aa16.86■□□□□ 0.29
DDX55-203ENST00000421670 FUT10Q6P4F1 479 aa16.86■□□□□ 0.29
DDX55-203ENST00000421670 GJB7Q6PEY0 223 aa16.86■□□□□ 0.29
DDX55-203ENST00000421670 DSTYKQ6XUX3 929 aa16.86■□□□□ 0.29
DDX55-203ENST00000421670 KLHL23Q8NBE8 558 aa16.86■□□□□ 0.29
DDX55-203ENST00000421670 TAF4BQ92750 862 aa16.86■□□□□ 0.29
DDX55-203ENST00000421670 TMEM169Q96HH4 297 aa16.86■□□□□ 0.29
DDX55-203ENST00000421670 B3GALT6Q96L58 329 aa16.86■□□□□ 0.29
DDX55-203ENST00000421670 SENP8Q96LD8 212 aa16.86■□□□□ 0.29
DDX55-203ENST00000421670 NT5C1BQ96P26 610 aa16.86■□□□□ 0.29
DDX55-203ENST00000421670 ARID3AQ99856 593 aa16.86■□□□□ 0.29
DDX55-203ENST00000421670 SMYD3Q9H7B4 428 aa16.86■□□□□ 0.29
DDX55-203ENST00000421670 FAM207AQ9NSI2 230 aaPredicted RBP16.86■□□□□ 0.29
DDX55-203ENST00000421670 RWDD3Q9Y3V2 267 aa16.86■□□□□ 0.29
DDX55-203ENST00000421670 CYB561D2O14569 222 aa16.85■□□□□ 0.29
DDX55-203ENST00000421670 FGF18O76093 207 aa16.85■□□□□ 0.29
DDX55-203ENST00000421670 TPM3P06753 285 aa16.85■□□□□ 0.29
DDX55-203ENST00000421670 ASPAP45381 313 aa16.85■□□□□ 0.29
DDX55-203ENST00000421670 RAP1GAPP47736 663 aa16.85■□□□□ 0.29
DDX55-203ENST00000421670 PHLDB3Q6NSJ2 640 aa16.85■□□□□ 0.29
DDX55-203ENST00000421670 DPY19L2P1Q6NXN4 242 aa16.85■□□□□ 0.29
DDX55-203ENST00000421670 PPM1KQ8N3J5 372 aa16.85■□□□□ 0.29
DDX55-203ENST00000421670 TIFAQ96CG3 184 aa16.85■□□□□ 0.29
DDX55-203ENST00000421670 SUSD3Q96L08 255 aa16.85■□□□□ 0.29
DDX55-203ENST00000421670 TGS1Q96RS0 853 aaKnown RBP16.85■□□□□ 0.29
DDX55-203ENST00000421670 MMS19Q96T76 1030 aa16.85■□□□□ 0.29
DDX55-203ENST00000421670 NIF3L1Q9GZT8 377 aa16.85■□□□□ 0.29
DDX55-203ENST00000421670 SLC28A3Q9HAS3 691 aa16.85■□□□□ 0.29
DDX55-203ENST00000421670 GDAP2Q9NXN4 497 aa16.85■□□□□ 0.29
DDX55-203ENST00000421670 APEX2Q9UBZ4 518 aa16.85■□□□□ 0.29
DDX55-203ENST00000421670 TIMM13Q9Y5L4 95 aaPredicted RBP16.85■□□□□ 0.29
DDX55-203ENST00000421670 EPHB6O15197 1021 aa16.85■□□□□ 0.29
DDX55-203ENST00000421670 PBX1P40424 430 aa16.85■□□□□ 0.29
DDX55-203ENST00000421670 ERVK-21P61565 698 aa16.85■□□□□ 0.29
DDX55-203ENST00000421670 GSE1Q14687 1217 aa16.85■□□□□ 0.29
DDX55-203ENST00000421670 LRIT3Q3SXY7 679 aa16.85■□□□□ 0.29
DDX55-203ENST00000421670 FAM171A1Q5VUB5 890 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms