RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 ATICP31939 592 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 PRMT2P55345 433 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 TRIP13Q15645 432 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-206ENST00000421141 MOB2Q70IA6 237 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 CLMNQ96JQ2 1002 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 EPB41L5Q9HCM4 733 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 BAG5Q9UL15 447 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 ARL4CP56559 192 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 TWF1Q12792 350 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 POLD3Q15054 466 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-206ENST00000421141 PTPAQ15257 358 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 SPOPLQ6IQ16 392 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 GPRC5CQ9NQ84 441 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 EXOC1LA0A1B0GW35 172 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 MX2P20592 715 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 DGKZQ13574 1117 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 RBBP5Q15291 538 aaKnown RBP11.32□□□□□ -0.6
PTCH1-206ENST00000421141 KSR1Q8IVT5 923 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 PRAMEF19Q5SWL8 479 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 DHX40Q8IX18 779 aaKnown RBP11.32□□□□□ -0.6
PTCH1-206ENST00000421141 VCXQ9H320 206 aa11.32□□□□□ -0.6
PTCH1-206ENST00000421141 MTA1Q13330 715 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 TREML2Q5T2D2 321 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 VSIG1Q86XK7 387 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 GIMAP7Q8NHV1 300 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 CD99L2Q8TCZ2 262 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 MCEEQ96PE7 176 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 MYH7BA7E2Y1 1941 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 NDUFAB1O14561 156 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 CUL1Q13616 776 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 RABGAP1LQ5R372 815 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 METTL16Q86W50 562 aaKnown RBP11.31□□□□□ -0.6
PTCH1-206ENST00000421141 CPA5Q8WXQ8 436 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 ARHGEF2Q92974 986 aaKnown RBP11.31□□□□□ -0.6
PTCH1-206ENST00000421141 KIAA1257Q9ULG3 409 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 GOLGA8KD6RF30 607 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 CCDC188H7C350 402 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 TMCC1O94876 653 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 PDGFRAP16234 1089 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 SPRYD7Q5W111 196 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 TLR8Q9NR97 1041 aaKnown RBP11.31□□□□□ -0.6
PTCH1-206ENST00000421141 NRBP1Q9UHY1 535 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 POMCP01189 267 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 HSPA8P11142 646 aaKnown RBP11.31□□□□□ -0.6
PTCH1-206ENST00000421141 HASPINQ8TF76 798 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 SH3KBP1Q96B97 665 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.31□□□□□ -0.6
PTCH1-206ENST00000421141 ATP8A1Q9Y2Q0 1164 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 SPDYE5A6NIY4 337 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 SYNCRIPO60506 623 aaKnown RBP11.31□□□□□ -0.6
PTCH1-206ENST00000421141 MBL2P11226 248 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-206ENST00000421141 ACADMP11310 421 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 APLP1P51693 650 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 IL9RQ01113 521 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 SLC27A1Q6PCB7 646 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 AP1M1Q9BXS5 423 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 FBXO44Q9H4M3 255 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 IGFLR1Q9H665 355 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 WDCPQ9H6R7 721 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 MED24O75448 989 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 GPC4O75487 556 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 CTDNEP1O95476 244 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 LGALS2P05162 132 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 IFNAR2P48551 515 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 STX1BP61266 288 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 RFFLQ8WZ73 363 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 GDAP1L1Q96MZ0 367 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 MFSD1Q9H3U5 465 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 SARS2Q9NP81 518 aaKnown RBP11.31□□□□□ -0.6
PTCH1-206ENST00000421141 TRPM5Q9NZQ8 1165 aa11.31□□□□□ -0.6
PTCH1-206ENST00000421141 EEF2KO00418 725 aaKnown RBP11.3□□□□□ -0.6
PTCH1-206ENST00000421141 USP2O75604 605 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-206ENST00000421141 ASMTLO95671 621 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 BCAT1P54687 386 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 FAM171A1Q5VUB5 890 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 FOPNLQ96NB1 174 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 HEMGNQ9BXL5 484 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 MICAL3Q7RTP6 2002 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 MAPTP10636 758 aaKnown RBP11.3□□□□□ -0.6
PTCH1-206ENST00000421141 RHBDL3P58872 404 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 C2orf54Q08AI8 447 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 CUL2Q13617 745 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 JADE1Q6IE81 842 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 TAS2R42Q7RTR8 314 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 CEP120Q8N960 986 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 RNF25Q96BH1 459 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-206ENST00000421141 UXTQ9UBK9 157 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-206ENST00000421141 NVLO15381 856 aaKnown RBP11.3□□□□□ -0.6
PTCH1-206ENST00000421141 MRPS6P82932 125 aaKnown RBP11.3□□□□□ -0.6
PTCH1-206ENST00000421141 APBA1Q02410 837 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 NSUN2Q08J23 767 aaKnown RBP eCLIP11.3□□□□□ -0.6
PTCH1-206ENST00000421141 BBS9Q3SYG4 887 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 CHSY1Q86X52 802 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 RCOR2Q8IZ40 523 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 SLC5A5Q92911 643 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-206ENST00000421141 TLL1O43897 1013 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 PGK1P00558 417 aa11.3□□□□□ -0.6
PTCH1-206ENST00000421141 ZNF177Q13360 481 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-206ENST00000421141 PPM1LQ5SGD2 360 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms