RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 M0QZQ0 153 aa18.39■□□□□ 0.53
UPF3AP3-201ENST00000420996 ZNF263O14978 683 aa18.39■□□□□ 0.53
UPF3AP3-201ENST00000420996 OAZ2O95190 189 aa18.39■□□□□ 0.53
UPF3AP3-201ENST00000420996 CDC25AP30304 524 aa18.39■□□□□ 0.53
UPF3AP3-201ENST00000420996 MLLT6P55198 1093 aaPredicted RBP18.39■□□□□ 0.53
UPF3AP3-201ENST00000420996 SEZ6Q53EL9 994 aa18.39■□□□□ 0.53
UPF3AP3-201ENST00000420996 ZPBP2Q6X784 338 aa18.39■□□□□ 0.53
UPF3AP3-201ENST00000420996 DTHD1Q6ZMT9 781 aa18.39■□□□□ 0.53
UPF3AP3-201ENST00000420996 TMEM161BQ8NDZ6 487 aa18.39■□□□□ 0.53
UPF3AP3-201ENST00000420996 BEST2Q8NFU1 509 aa18.39■□□□□ 0.53
UPF3AP3-201ENST00000420996 E2F7Q96AV8 911 aa18.39■□□□□ 0.53
UPF3AP3-201ENST00000420996 OXCT2Q9BYC2 517 aaPredicted RBP18.39■□□□□ 0.53
UPF3AP3-201ENST00000420996 ANKFY1Q9P2R3 1169 aa18.39■□□□□ 0.53
UPF3AP3-201ENST00000420996 TUBGCP4Q9UGJ1 667 aa18.39■□□□□ 0.53
UPF3AP3-201ENST00000420996 GMEB2Q9UKD1 530 aa18.39■□□□□ 0.53
UPF3AP3-201ENST00000420996 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.39■□□□□ 0.53
UPF3AP3-201ENST00000420996 PIAS3Q9Y6X2 628 aa18.39■□□□□ 0.53
UPF3AP3-201ENST00000420996 DNAH14Q0VDD8 3507 aa18.39■□□□□ 0.53
UPF3AP3-201ENST00000420996 CLDN3O15551 220 aa18.38■□□□□ 0.53
UPF3AP3-201ENST00000420996 MAPTP10636 758 aaKnown RBP18.38■□□□□ 0.53
UPF3AP3-201ENST00000420996 PLS3P13797 630 aa18.38■□□□□ 0.53
UPF3AP3-201ENST00000420996 GJA1P17302 382 aa18.38■□□□□ 0.53
UPF3AP3-201ENST00000420996 TGM1P22735 817 aa18.38■□□□□ 0.53
UPF3AP3-201ENST00000420996 LRPAP1P30533 357 aa18.38■□□□□ 0.53
UPF3AP3-201ENST00000420996 CCR3P51677 355 aa18.38■□□□□ 0.53
UPF3AP3-201ENST00000420996 SMTNP53814 917 aa18.38■□□□□ 0.53
UPF3AP3-201ENST00000420996 ATXN1P54253 815 aaKnown RBP18.38■□□□□ 0.53
UPF3AP3-201ENST00000420996 YWHAHQ04917 246 aaPredicted RBP18.38■□□□□ 0.53
UPF3AP3-201ENST00000420996 MCL1Q07820 350 aa18.38■□□□□ 0.53
UPF3AP3-201ENST00000420996 TEAD2Q15562 447 aa18.38■□□□□ 0.53
UPF3AP3-201ENST00000420996 CELF5Q8N6W0 485 aaKnown RBP18.38■□□□□ 0.53
UPF3AP3-201ENST00000420996 RAB23Q9ULC3 237 aa18.38■□□□□ 0.53
UPF3AP3-201ENST00000420996 YIPF1Q9Y548 306 aa18.38■□□□□ 0.53
UPF3AP3-201ENST00000420996 TTC26A0AVF1 554 aa18.37■□□□□ 0.53
UPF3AP3-201ENST00000420996 HEPACAM2A8MVW5 462 aa18.37■□□□□ 0.53
UPF3AP3-201ENST00000420996 SEC24BO95487 1268 aa18.37■□□□□ 0.53
UPF3AP3-201ENST00000420996 NEFLP07196 543 aa18.37■□□□□ 0.53
UPF3AP3-201ENST00000420996 CXCL8P10145 99 aa18.37■□□□□ 0.53
UPF3AP3-201ENST00000420996 ZBTB6Q15916 424 aa18.37■□□□□ 0.53
UPF3AP3-201ENST00000420996 HYIQ5T013 277 aa18.37■□□□□ 0.53
UPF3AP3-201ENST00000420996 KCTD17Q8N5Z5 321 aa18.37■□□□□ 0.53
UPF3AP3-201ENST00000420996 SHKBP1Q8TBC3 707 aa18.37■□□□□ 0.53
UPF3AP3-201ENST00000420996 MSANTD3Q96H12 275 aa18.37■□□□□ 0.53
UPF3AP3-201ENST00000420996 LRRC3Q9BY71 257 aa18.37■□□□□ 0.53
UPF3AP3-201ENST00000420996 SH2B1Q9NRF2 756 aaPredicted RBP18.37■□□□□ 0.53
UPF3AP3-201ENST00000420996 CDV3Q9UKY7 258 aaKnown RBP18.37■□□□□ 0.53
UPF3AP3-201ENST00000420996 USP18Q9UMW8 372 aa18.37■□□□□ 0.53
UPF3AP3-201ENST00000420996 ARNTLO00327 626 aa18.36■□□□□ 0.53
UPF3AP3-201ENST00000420996 NCANO14594 1321 aa18.36■□□□□ 0.53
UPF3AP3-201ENST00000420996 VNN2O95498 520 aa18.36■□□□□ 0.53
UPF3AP3-201ENST00000420996 CLTAP09496 248 aa18.36■□□□□ 0.53
UPF3AP3-201ENST00000420996 CHRNB1P11230 501 aa18.36■□□□□ 0.53
UPF3AP3-201ENST00000420996 CYP3A5P20815 502 aa18.36■□□□□ 0.53
UPF3AP3-201ENST00000420996 CCNE1P24864 410 aa18.36■□□□□ 0.53
UPF3AP3-201ENST00000420996 AARSP49588 968 aaKnown RBP eCLIP18.36■□□□□ 0.53
UPF3AP3-201ENST00000420996 RAD51AP2Q09MP3 1159 aa18.36■□□□□ 0.53
UPF3AP3-201ENST00000420996 PLD1Q13393 1074 aa18.36■□□□□ 0.53
UPF3AP3-201ENST00000420996 SYT2Q8N9I0 419 aaPredicted RBP18.36■□□□□ 0.53
UPF3AP3-201ENST00000420996 CSGALNACT1Q8TDX6 532 aa18.36■□□□□ 0.53
UPF3AP3-201ENST00000420996 SLITRK6Q9H5Y7 841 aa18.36■□□□□ 0.53
UPF3AP3-201ENST00000420996 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.36■□□□□ 0.53
UPF3AP3-201ENST00000420996 TIMM13Q9Y5L4 95 aaPredicted RBP18.36■□□□□ 0.53
UPF3AP3-201ENST00000420996 OR6C75A6NL08 312 aa18.35■□□□□ 0.53
UPF3AP3-201ENST00000420996 CHADO15335 359 aa18.35■□□□□ 0.53
UPF3AP3-201ENST00000420996 MATR3P43243 847 aaKnown RBP eCLIP18.35■□□□□ 0.53
UPF3AP3-201ENST00000420996 CXCL12P48061 93 aa18.35■□□□□ 0.53
UPF3AP3-201ENST00000420996 EPHB3P54753 998 aa18.35■□□□□ 0.53
UPF3AP3-201ENST00000420996 SPAG1Q07617 926 aa18.35■□□□□ 0.53
UPF3AP3-201ENST00000420996 DUSP4Q13115 394 aa18.35■□□□□ 0.53
UPF3AP3-201ENST00000420996 GPR17Q13304 367 aa18.35■□□□□ 0.53
UPF3AP3-201ENST00000420996 ZRSR1Q15695 479 aaKnown RBP18.35■□□□□ 0.53
UPF3AP3-201ENST00000420996 LAIR1Q6GTX8 287 aa18.35■□□□□ 0.53
UPF3AP3-201ENST00000420996 C1orf228Q6PIY5 440 aa18.35■□□□□ 0.53
UPF3AP3-201ENST00000420996 USP37Q86T82 979 aa18.35■□□□□ 0.53
UPF3AP3-201ENST00000420996 TMC8Q8IU68 726 aa18.35■□□□□ 0.53
UPF3AP3-201ENST00000420996 YAF2Q8IY57 180 aa18.35■□□□□ 0.53
UPF3AP3-201ENST00000420996 TMEM130Q8N3G9 435 aa18.35■□□□□ 0.53
UPF3AP3-201ENST00000420996 KIF12Q96FN5 646 aa18.35■□□□□ 0.53
UPF3AP3-201ENST00000420996 PGLYRP2Q96PD5 576 aa18.35■□□□□ 0.53
UPF3AP3-201ENST00000420996 RTKNQ9BST9 563 aa18.35■□□□□ 0.53
UPF3AP3-201ENST00000420996 HAPLN2Q9GZV7 340 aa18.35■□□□□ 0.53
UPF3AP3-201ENST00000420996 DNAJC25Q9H1X3 360 aa18.35■□□□□ 0.53
UPF3AP3-201ENST00000420996 PARD6AQ9NPB6 346 aa18.35■□□□□ 0.53
UPF3AP3-201ENST00000420996 PPP4R2Q9NY27 417 aa18.35■□□□□ 0.53
UPF3AP3-201ENST00000420996 KCND2Q9NZV8 630 aa18.35■□□□□ 0.53
UPF3AP3-201ENST00000420996 UBQLN1Q9UMX0 589 aaKnown RBP18.35■□□□□ 0.53
UPF3AP3-201ENST00000420996 A0A1W2PRU2 124 aa18.34■□□□□ 0.53
UPF3AP3-201ENST00000420996 H0YCG3 227 aa18.34■□□□□ 0.53
UPF3AP3-201ENST00000420996 XPOTO43592 962 aaKnown RBP18.34■□□□□ 0.53
UPF3AP3-201ENST00000420996 OR4Q2P0C623 313 aa18.34■□□□□ 0.53
UPF3AP3-201ENST00000420996 ALDH1A3P47895 512 aa18.34■□□□□ 0.53
UPF3AP3-201ENST00000420996 FCHO2Q0JRZ9 810 aa18.34■□□□□ 0.53
UPF3AP3-201ENST00000420996 KYAT1Q16773 422 aa18.34■□□□□ 0.53
UPF3AP3-201ENST00000420996 DSTYKQ6XUX3 929 aa18.34■□□□□ 0.53
UPF3AP3-201ENST00000420996 SPEM1Q8N4L4 309 aa18.34■□□□□ 0.53
UPF3AP3-201ENST00000420996 KCNN1Q92952 543 aa18.34■□□□□ 0.53
UPF3AP3-201ENST00000420996 RSPRY1Q96DX4 576 aa18.34■□□□□ 0.53
UPF3AP3-201ENST00000420996 PNMA5Q96PV4 448 aa18.34■□□□□ 0.53
UPF3AP3-201ENST00000420996 TSPAN18Q96SJ8 248 aa18.34■□□□□ 0.53
UPF3AP3-201ENST00000420996 CRISPLD1Q9H336 500 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms