RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 SMYD1Q8NB12 490 aa15.37■□□□□ 0.05
CHRD-204ENST00000420973 MTMR14Q8NCE2 650 aa15.37■□□□□ 0.05
CHRD-204ENST00000420973 SPATA17Q96L03 361 aa15.37■□□□□ 0.05
CHRD-204ENST00000420973 TRAPPC9Q96Q05 1148 aa15.37■□□□□ 0.05
CHRD-204ENST00000420973 NUDCD1Q96RS6 583 aa15.37■□□□□ 0.05
CHRD-204ENST00000420973 GANQ9H2C0 597 aa15.37■□□□□ 0.05
CHRD-204ENST00000420973 SPON1Q9HCB6 807 aa15.37■□□□□ 0.05
CHRD-204ENST00000420973 PCDH18Q9HCL0 1135 aa15.37■□□□□ 0.05
CHRD-204ENST00000420973 CYP39A1Q9NYL5 469 aa15.37■□□□□ 0.05
CHRD-204ENST00000420973 TMA7Q9Y2S6 64 aaKnown RBP15.37■□□□□ 0.05
CHRD-204ENST00000420973 LRRC37AA6NMS7 1700 aa15.37■□□□□ 0.05
CHRD-204ENST00000420973 FZD9O00144 591 aa15.37■□□□□ 0.05
CHRD-204ENST00000420973 GGPS1O95749 300 aa15.37■□□□□ 0.05
CHRD-204ENST00000420973 SP2Q02086 613 aa15.37■□□□□ 0.05
CHRD-204ENST00000420973 MAPK7Q13164 816 aa15.37■□□□□ 0.05
CHRD-204ENST00000420973 SNRNP35Q16560 246 aaKnown RBP15.37■□□□□ 0.05
CHRD-204ENST00000420973 MAP1SQ66K74 1059 aaPredicted RBP15.37■□□□□ 0.05
CHRD-204ENST00000420973 SPOPLQ6IQ16 392 aa15.37■□□□□ 0.05
CHRD-204ENST00000420973 VSIG10LQ86VR7 867 aa15.37■□□□□ 0.05
CHRD-204ENST00000420973 IQCF2Q8IXL9 164 aa15.37■□□□□ 0.05
CHRD-204ENST00000420973 RASAL2Q9UJF2 1139 aa15.37■□□□□ 0.05
CHRD-204ENST00000420973 STK24Q9Y6E0 443 aa15.37■□□□□ 0.05
CHRD-204ENST00000420973 PSAPP07602 524 aa15.37■□□□□ 0.05
CHRD-204ENST00000420973 GSTA1P08263 222 aa15.37■□□□□ 0.05
CHRD-204ENST00000420973 SERPINB3P29508 390 aa15.37■□□□□ 0.05
CHRD-204ENST00000420973 GALCP54803 685 aa15.37■□□□□ 0.05
CHRD-204ENST00000420973 RNASELQ05823 741 aaKnown RBP15.37■□□□□ 0.05
CHRD-204ENST00000420973 BYSLQ13895 437 aaKnown RBP15.37■□□□□ 0.05
CHRD-204ENST00000420973 TARS2Q9BW92 718 aaKnown RBP15.37■□□□□ 0.05
CHRD-204ENST00000420973 NAGPAQ9UK23 515 aa15.37■□□□□ 0.05
CHRD-204ENST00000420973 ADRB2P07550 413 aa15.36■□□□□ 0.05
CHRD-204ENST00000420973 PYGMP11217 842 aa15.36■□□□□ 0.05
CHRD-204ENST00000420973 STRN3Q13033 797 aa15.36■□□□□ 0.05
CHRD-204ENST00000420973 TMEM63BQ5T3F8 832 aa15.36■□□□□ 0.05
CHRD-204ENST00000420973 PHLDB3Q6NSJ2 640 aa15.36■□□□□ 0.05
CHRD-204ENST00000420973 CAPN12Q6ZSI9 719 aa15.36■□□□□ 0.05
CHRD-204ENST00000420973 FBXO16Q8IX29 292 aaPredicted RBP15.36■□□□□ 0.05
CHRD-204ENST00000420973 EXOC8Q8IYI6 725 aa15.36■□□□□ 0.05
CHRD-204ENST00000420973 SLC7A3Q8WY07 619 aa15.36■□□□□ 0.05
CHRD-204ENST00000420973 CLIP3Q96DZ5 547 aa15.36■□□□□ 0.05
CHRD-204ENST00000420973 DPH5Q9H2P9 285 aa15.36■□□□□ 0.05
CHRD-204ENST00000420973 ATP8A1Q9Y2Q0 1164 aa15.36■□□□□ 0.05
CHRD-204ENST00000420973 TSC22D4Q9Y3Q8 395 aa15.36■□□□□ 0.05
CHRD-204ENST00000420973 CD58P19256 250 aa15.36■□□□□ 0.05
CHRD-204ENST00000420973 HOXD12P35452 270 aa15.36■□□□□ 0.05
CHRD-204ENST00000420973 FIGNQ5HY92 759 aa15.36■□□□□ 0.05
CHRD-204ENST00000420973 DPY19L2Q6NUT2 758 aa15.36■□□□□ 0.05
CHRD-204ENST00000420973 SCARA5Q6ZMJ2 495 aa15.36■□□□□ 0.05
CHRD-204ENST00000420973 THNSL1Q8IYQ7 743 aa15.36■□□□□ 0.05
CHRD-204ENST00000420973 DDX47Q9H0S4 455 aaKnown RBP15.36■□□□□ 0.05
CHRD-204ENST00000420973 RNF19AQ9NV58 838 aa15.36■□□□□ 0.05
CHRD-204ENST00000420973 BTBD7Q9P203 1132 aa15.36■□□□□ 0.05
CHRD-204ENST00000420973 SUCLA2Q9P2R7 463 aaPredicted RBP15.36■□□□□ 0.05
CHRD-204ENST00000420973 NKX1-2Q9UD57 310 aaPredicted RBP15.36■□□□□ 0.05
CHRD-204ENST00000420973 LTBP1Q14766 1721 aa15.36■□□□□ 0.05
CHRD-204ENST00000420973 USP2O75604 605 aaPredicted RBP15.36■□□□□ 0.05
CHRD-204ENST00000420973 HOXD11P31277 338 aaPredicted RBP15.36■□□□□ 0.05
CHRD-204ENST00000420973 EPM2AIP1Q7L775 607 aaPredicted RBP15.36■□□□□ 0.05
CHRD-204ENST00000420973 TAS1R2Q8TE23 839 aa15.36■□□□□ 0.05
CHRD-204ENST00000420973 ZBED3Q96IU2 234 aaPredicted RBP15.36■□□□□ 0.05
CHRD-204ENST00000420973 AZI2Q9H6S1 392 aa15.36■□□□□ 0.05
CHRD-204ENST00000420973 ZMYM2Q9UBW7 1377 aa15.35■□□□□ 0.05
CHRD-204ENST00000420973 MMEP08473 750 aa15.35■□□□□ 0.05
CHRD-204ENST00000420973 PEX5P50542 639 aa15.35■□□□□ 0.05
CHRD-204ENST00000420973 JAK3P52333 1124 aa15.35■□□□□ 0.05
CHRD-204ENST00000420973 TRADDQ15628 312 aa15.35■□□□□ 0.05
CHRD-204ENST00000420973 SEPT7Q16181 437 aaKnown RBP15.35■□□□□ 0.05
CHRD-204ENST00000420973 CFAP221Q4G0U5 840 aa15.35■□□□□ 0.05
CHRD-204ENST00000420973 SLC35B4Q969S0 331 aa15.35■□□□□ 0.05
CHRD-204ENST00000420973 TLR10Q9BXR5 811 aa15.35■□□□□ 0.05
CHRD-204ENST00000420973 ZNF302Q9NR11 478 aa15.35■□□□□ 0.05
CHRD-204ENST00000420973 PGAP2Q9UHJ9 254 aa15.35■□□□□ 0.05
CHRD-204ENST00000420973 INO80B-WBP1J3KQ70 363 aa15.35■□□□□ 0.05
CHRD-204ENST00000420973 K7ERI5 159 aa15.35■□□□□ 0.05
CHRD-204ENST00000420973 SHBGP04278 402 aa15.35■□□□□ 0.05
CHRD-204ENST00000420973 KRT19P08727 400 aa15.35■□□□□ 0.05
CHRD-204ENST00000420973 DRD4P21917 467 aa15.35■□□□□ 0.05
CHRD-204ENST00000420973 PAPD7Q5XG87 772 aaKnown RBP15.35■□□□□ 0.05
CHRD-204ENST00000420973 TMEM53Q6P2H8 277 aa15.35■□□□□ 0.05
CHRD-204ENST00000420973 DDX42Q86XP3 938 aaKnown RBP eCLIP15.35■□□□□ 0.05
CHRD-204ENST00000420973 CEP70Q8NHQ1 597 aa15.35■□□□□ 0.05
CHRD-204ENST00000420973 XPO6Q96QU8 1125 aaKnown RBP15.35■□□□□ 0.05
CHRD-204ENST00000420973 INO80BQ9C086 356 aaPredicted RBP15.35■□□□□ 0.05
CHRD-204ENST00000420973 ETNK1Q9HBU6 452 aa15.35■□□□□ 0.05
CHRD-204ENST00000420973 USTQ9Y2C2 406 aa15.35■□□□□ 0.05
CHRD-204ENST00000420973 TMEM221A6NGB7 291 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 PDLIM1O00151 329 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 DDX3XO00571 662 aaKnown RBP eCLIP15.34■□□□□ 0.05
CHRD-204ENST00000420973 TROVE2P10155 538 aaKnown RBP eCLIP15.34■□□□□ 0.05
CHRD-204ENST00000420973 BCRP11274 1271 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 SKIP12755 728 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 SOX5P35711 763 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 MYH11P35749 1972 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 NCALDP61601 193 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 SGSM1Q2NKQ1 1148 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 THOC7Q6I9Y2 204 aaKnown RBP15.34■□□□□ 0.05
CHRD-204ENST00000420973 CATSPERGQ6ZRH7 1159 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 MPHOSPH6Q99547 160 aaKnown RBP15.34■□□□□ 0.05
CHRD-204ENST00000420973 NSRP1Q9H0G5 558 aaKnown RBP15.34■□□□□ 0.05
CHRD-204ENST00000420973 TMEM206Q9H813 350 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms