RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 DKC1O60832 514 aaKnown RBP eCLIP7.72□□□□□ -1.17
HMGN1-205ENST00000419378 RNGTTO60942 597 aaKnown RBP7.72□□□□□ -1.17
HMGN1-205ENST00000419378 GPR32O75388 356 aa7.72□□□□□ -1.17
HMGN1-205ENST00000419378 TMOD1P28289 359 aa7.72□□□□□ -1.17
HMGN1-205ENST00000419378 MCM7P33993 719 aa7.72□□□□□ -1.17
HMGN1-205ENST00000419378 TXKP42681 527 aa7.72□□□□□ -1.17
HMGN1-205ENST00000419378 CRYBB1P53674 252 aaPredicted RBP7.72□□□□□ -1.17
HMGN1-205ENST00000419378 CYP4A11Q02928 519 aa7.72□□□□□ -1.17
HMGN1-205ENST00000419378 ORC2Q13416 577 aaPredicted RBP7.72□□□□□ -1.17
HMGN1-205ENST00000419378 DRP2Q13474 957 aa7.72□□□□□ -1.17
HMGN1-205ENST00000419378 ADGRE1Q14246 886 aa7.72□□□□□ -1.17
HMGN1-205ENST00000419378 TMEM266Q2M3C6 531 aa7.72□□□□□ -1.17
HMGN1-205ENST00000419378 Q6ZS46 218 aa7.72□□□□□ -1.17
HMGN1-205ENST00000419378 SPRED2Q7Z698 418 aa7.72□□□□□ -1.17
HMGN1-205ENST00000419378 FAM228AQ86W67 206 aa7.72□□□□□ -1.17
HMGN1-205ENST00000419378 ARNTL2Q8WYA1 636 aa7.72□□□□□ -1.17
HMGN1-205ENST00000419378 TOP1MTQ969P6 601 aa7.72□□□□□ -1.17
HMGN1-205ENST00000419378 DYDC2Q96IM9 177 aa7.72□□□□□ -1.17
HMGN1-205ENST00000419378 MTMR9Q96QG7 549 aa7.72□□□□□ -1.17
HMGN1-205ENST00000419378 UBL7Q96S82 380 aaPredicted RBP7.72□□□□□ -1.17
HMGN1-205ENST00000419378 YME1L1Q96TA2 773 aa7.72□□□□□ -1.17
HMGN1-205ENST00000419378 FTHL17Q9BXU8 183 aa7.72□□□□□ -1.17
HMGN1-205ENST00000419378 CEP41Q9BYV8 373 aa7.72□□□□□ -1.17
HMGN1-205ENST00000419378 TMX1Q9H3N1 280 aa7.72□□□□□ -1.17
HMGN1-205ENST00000419378 TTC12Q9H892 705 aaPredicted RBP7.72□□□□□ -1.17
HMGN1-205ENST00000419378 PIDD1Q9HB75 910 aa7.72□□□□□ -1.17
HMGN1-205ENST00000419378 ERVK-5Q9HDB9 667 aa7.72□□□□□ -1.17
HMGN1-205ENST00000419378 PADI3Q9ULW8 664 aa7.72□□□□□ -1.17
HMGN1-205ENST00000419378 PCDHA12Q9UN75 941 aa7.72□□□□□ -1.17
HMGN1-205ENST00000419378 AKT3Q9Y243 479 aa7.72□□□□□ -1.17
HMGN1-205ENST00000419378 NOC2LQ9Y3T9 749 aaKnown RBP7.72□□□□□ -1.17
HMGN1-205ENST00000419378 KIF3AQ9Y496 699 aa7.72□□□□□ -1.17
HMGN1-205ENST00000419378 INSL6Q9Y581 213 aa7.72□□□□□ -1.17
HMGN1-205ENST00000419378 ARID2Q68CP9 1835 aa7.72□□□□□ -1.17
HMGN1-205ENST00000419378 TTC3P53804 2025 aa7.71□□□□□ -1.17
HMGN1-205ENST00000419378 MUC3AQ02505 3323 aa7.71□□□□□ -1.17
HMGN1-205ENST00000419378 IGKV6-21A0A0C4DH24 114 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 EPOPA6NHQ4 379 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 RFXAPO00287 272 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 ENPP3O14638 875 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 DNAJA2O60884 412 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 MAFO75444 373 aaPredicted RBP7.71□□□□□ -1.18
HMGN1-205ENST00000419378 RPS6KA5O75582 802 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 OR52Z1P0C646 297 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 U2AF2P26368 475 aaKnown RBP eCLIP7.71□□□□□ -1.188e-8■■■■■ 35
HMGN1-205ENST00000419378 GJB2P29033 226 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 YWHABP31946 246 aaKnown RBP7.71□□□□□ -1.18
HMGN1-205ENST00000419378 TRAPPC10P48553 1259 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 GPC3P51654 580 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 NPEPPSP55786 919 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 NLRP11P59045 1033 aaKnown RBP7.71□□□□□ -1.18
HMGN1-205ENST00000419378 CTTNQ14247 550 aaKnown RBP7.71□□□□□ -1.18
HMGN1-205ENST00000419378 ZNF174Q15697 407 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 TTC38Q5R3I4 469 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 TMEM201Q5SNT2 666 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 UBE3DQ7Z6J8 389 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 RTN4RL1Q86UN2 441 aaPredicted RBP7.71□□□□□ -1.18
HMGN1-205ENST00000419378 ALYREFQ86V81 257 aaKnown RBP7.71□□□□□ -1.18
HMGN1-205ENST00000419378 LSRQ86X29 649 aaPredicted RBP7.71□□□□□ -1.18
HMGN1-205ENST00000419378 C4orf19Q8IY42 314 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 FAM169BQ8N8A8 192 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 RBBP8NLQ8NC74 664 aaPredicted RBP7.71□□□□□ -1.18
HMGN1-205ENST00000419378 NEK9Q8TD19 979 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 ISL2Q96A47 359 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 ACSF2Q96CM8 615 aaPredicted RBP7.71□□□□□ -1.18
HMGN1-205ENST00000419378 ZNF668Q96K58 619 aaPredicted RBP7.71□□□□□ -1.18
HMGN1-205ENST00000419378 CEP170P1Q96L14 293 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 SCLT1Q96NL6 688 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 TGS1Q96RS0 853 aaKnown RBP7.71□□□□□ -1.18
HMGN1-205ENST00000419378 EIF2AK1Q9BQI3 630 aaKnown RBP7.71□□□□□ -1.18
HMGN1-205ENST00000419378 ADAMTS10Q9H324 1103 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 ZSWIM4Q9H7M6 989 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 FBRSQ9HAH7 460 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 RC3H2Q9HBD1 1191 aaKnown RBP7.71□□□□□ -1.18
HMGN1-205ENST00000419378 CYP26B1Q9NR63 512 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 RGL1Q9NZL6 768 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 STK17AQ9UEE5 414 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 KLHL3Q9UH77 587 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 ADAM30Q9UKF2 790 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 MTUS1Q9ULD2 1270 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 NOL7Q9UMY1 257 aaKnown RBP7.71□□□□□ -1.18
HMGN1-205ENST00000419378 ST3GAL5Q9UNP4 418 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 ADGRA3Q8IWK6 1321 aa7.71□□□□□ -1.18
HMGN1-205ENST00000419378 SLC22A31A6NKX4 558 aa7.7□□□□□ -1.18
HMGN1-205ENST00000419378 SMAD7O15105 426 aaKnown RBP7.7□□□□□ -1.18
HMGN1-205ENST00000419378 GAS2O43903 313 aaKnown RBP7.7□□□□□ -1.18
HMGN1-205ENST00000419378 MGEA5O60502 916 aa7.7□□□□□ -1.18
HMGN1-205ENST00000419378 SLITRK3O94933 977 aa7.7□□□□□ -1.18
HMGN1-205ENST00000419378 LYPLA2O95372 231 aa7.7□□□□□ -1.18
HMGN1-205ENST00000419378 RAB6AP20340 208 aa7.7□□□□□ -1.18
HMGN1-205ENST00000419378 TOB1P50616 345 aaPredicted RBP7.7□□□□□ -1.18
HMGN1-205ENST00000419378 POLGP54098 1239 aaPredicted RBP7.7□□□□□ -1.18
HMGN1-205ENST00000419378 ERVK-21P61565 698 aa7.7□□□□□ -1.18
HMGN1-205ENST00000419378 EMC2Q15006 297 aa7.7□□□□□ -1.18
HMGN1-205ENST00000419378 ODR4Q5SWX8 454 aa7.7□□□□□ -1.18
HMGN1-205ENST00000419378 FAM43BQ6ZT52 329 aaPredicted RBP7.7□□□□□ -1.18
HMGN1-205ENST00000419378 ANKS3Q6ZW76 656 aa7.7□□□□□ -1.18
HMGN1-205ENST00000419378 TPH2Q8IWU9 490 aa7.7□□□□□ -1.18
HMGN1-205ENST00000419378 ZNF507Q8TCN5 953 aa7.7□□□□□ -1.18
HMGN1-205ENST00000419378 GDPD5Q8WTR4 605 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms