RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 SLC9A3P48764 834 aa10.77□□□□□ -0.68
SATB1-204ENST00000417717 MYL7Q01449 175 aa10.77□□□□□ -0.68
SATB1-204ENST00000417717 KCNMA1Q12791 1236 aa10.77□□□□□ -0.68
SATB1-204ENST00000417717 PDK3Q15120 406 aa10.77□□□□□ -0.68
SATB1-204ENST00000417717 IZUMO3Q5VZ72 239 aa10.77□□□□□ -0.68
SATB1-204ENST00000417717 SCYL2Q6P3W7 929 aa10.77□□□□□ -0.68
SATB1-204ENST00000417717 UNC45BQ8IWX7 931 aa10.77□□□□□ -0.68
SATB1-204ENST00000417717 AMER2Q8N7J2 671 aa10.77□□□□□ -0.68
SATB1-204ENST00000417717 TC2NQ8N9U0 490 aa10.77□□□□□ -0.68
SATB1-204ENST00000417717 WDR36Q8NI36 951 aaKnown RBP10.77□□□□□ -0.68
SATB1-204ENST00000417717 SCFD1Q8WVM8 642 aa10.77□□□□□ -0.68
SATB1-204ENST00000417717 RORBQ92753 470 aa10.77□□□□□ -0.68
SATB1-204ENST00000417717 RAD51CO43502 376 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 KLHL18O94889 574 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 MBD4O95243 580 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 ITGA2BP08514 1039 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 CYP2J2P51589 502 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 VBP1P61758 197 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 PPARAQ07869 468 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 LVRNQ6Q4G3 990 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 LMBR1LQ6UX01 489 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 KRT28Q7Z3Y7 464 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 TRMT2AQ8IZ69 625 aaKnown RBP10.77□□□□□ -0.69
SATB1-204ENST00000417717 LARP4BQ92615 738 aaKnown RBP10.77□□□□□ -0.69
SATB1-204ENST00000417717 TATDN2Q93075 761 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 MNTQ99583 582 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 TRIM51Q9BSJ1 452 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 SLC13A1Q9BZW2 595 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 C6orf62Q9GZU0 229 aaPredicted RBP10.77□□□□□ -0.69
SATB1-204ENST00000417717 PFDN2Q9UHV9 154 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 RICTORQ6R327 1708 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 PREX1Q8TCU6 1659 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 MAP3K13O43283 966 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 AKAP5P24588 427 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 PMLP29590 882 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 FNTAP49354 379 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 NCKAP1LP55160 1127 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 SLC29A2Q14542 456 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 ZNF394Q53GI3 561 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 BNC2Q6ZN30 1099 aaPredicted RBP10.77□□□□□ -0.69
SATB1-204ENST00000417717 ANKRD13DQ6ZTN6 518 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 CCNYL1Q8N7R7 359 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 PRCCQ92733 491 aaPredicted RBP10.77□□□□□ -0.69
SATB1-204ENST00000417717 GPATCH1Q9BRR8 931 aaKnown RBP10.77□□□□□ -0.69
SATB1-204ENST00000417717 ERP44Q9BS26 406 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 PACSIN1Q9BY11 444 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 WNT8AQ9H1J5 351 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 ZBTB1Q9Y2K1 713 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 MAST3O60307 1309 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 LOC100653049A0A140TA62 436 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 A0A1B0GTH6 734 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 PHF2O75151 1096 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 KRT34O76011 436 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 TKTP29401 623 aaKnown RBP10.77□□□□□ -0.69
SATB1-204ENST00000417717 SKIV2L2P42285 1042 aaKnown RBP10.77□□□□□ -0.69
SATB1-204ENST00000417717 EIF4A2Q14240 407 aaKnown RBP10.77□□□□□ -0.69
SATB1-204ENST00000417717 HIF1AQ16665 826 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 C5orf22Q49AR2 442 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 TMEM53Q6P2H8 277 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 TRAPPC11Q7Z392 1133 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 CCDC28AQ8IWP9 274 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 APPL2Q8NEU8 664 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 NEDD1Q8NHV4 660 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 NAT14Q8WUY8 206 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 APOL6Q9BWW8 343 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 ARHGEF10LQ9HCE6 1279 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 UVRAGQ9P2Y5 699 aa10.77□□□□□ -0.69
SATB1-204ENST00000417717 ZNF521Q96K83 1311 aa10.76□□□□□ -0.69
SATB1-204ENST00000417717 FAM83GA6ND36 823 aa10.76□□□□□ -0.69
SATB1-204ENST00000417717 TMEM247A6NEH6 219 aa10.76□□□□□ -0.69
SATB1-204ENST00000417717 TEX33O43247 280 aa10.76□□□□□ -0.69
SATB1-204ENST00000417717 ANXA13P27216 316 aa10.76□□□□□ -0.69
SATB1-204ENST00000417717 EPHB2P29323 1055 aa10.76□□□□□ -0.69
SATB1-204ENST00000417717 RAP1GAPP47736 663 aa10.76□□□□□ -0.69
SATB1-204ENST00000417717 LLGL1Q15334 1064 aa10.76□□□□□ -0.69
SATB1-204ENST00000417717 PIK3C3Q8NEB9 887 aa10.76□□□□□ -0.69
SATB1-204ENST00000417717 GCOM2Q9BZD3 368 aaPredicted RBP10.76□□□□□ -0.69
SATB1-204ENST00000417717 PIK3C2BO00750 1634 aa10.76□□□□□ -0.69
SATB1-204ENST00000417717 QRICH2Q9H0J4 1663 aa10.76□□□□□ -0.69
SATB1-204ENST00000417717 SSU72P8A0A1W2PR75 194 aa10.76□□□□□ -0.69
SATB1-204ENST00000417717 PIPSLA2A3N6 862 aa10.76□□□□□ -0.69
SATB1-204ENST00000417717 LRRC53A6NM62 1247 aa10.76□□□□□ -0.69
SATB1-204ENST00000417717 F8W810 466 aa10.76□□□□□ -0.69
SATB1-204ENST00000417717 CLOCKO15516 846 aa10.76□□□□□ -0.69
SATB1-204ENST00000417717 SEC24AO95486 1093 aa10.76□□□□□ -0.69
SATB1-204ENST00000417717 APOA4P06727 396 aa10.76□□□□□ -0.69
SATB1-204ENST00000417717 PABPC1P11940 636 aaKnown RBP10.76□□□□□ -0.69
SATB1-204ENST00000417717 P4HA1P13674 534 aa10.76□□□□□ -0.69
SATB1-204ENST00000417717 CCNA2P20248 432 aa10.76□□□□□ -0.69
SATB1-204ENST00000417717 PSMC2P35998 433 aaKnown RBP10.76□□□□□ -0.69
SATB1-204ENST00000417717 SLC1A1P43005 524 aa10.76□□□□□ -0.69
SATB1-204ENST00000417717 RAD23AP54725 363 aa10.76□□□□□ -0.69
SATB1-204ENST00000417717 RHAGQ02094 409 aa10.76□□□□□ -0.69
SATB1-204ENST00000417717 RESP18Q5W5W9 173 aa10.76□□□□□ -0.69
SATB1-204ENST00000417717 SYTL1Q8IYJ3 562 aa10.76□□□□□ -0.69
SATB1-204ENST00000417717 ANKRD13AQ8IZ07 590 aa10.76□□□□□ -0.69
SATB1-204ENST00000417717 C4orf33Q8N1A6 199 aa10.76□□□□□ -0.69
SATB1-204ENST00000417717 REXO1Q8N1G1 1221 aaKnown RBP10.76□□□□□ -0.69
SATB1-204ENST00000417717 SAMD3Q8N6K7 520 aa10.76□□□□□ -0.69
SATB1-204ENST00000417717 RDH13Q8NBN7 331 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms