RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 MLF2Q15773 248 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 PRRT3Q5FWE3 981 aa6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 COLEC12Q5KU26 742 aa6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 ZBTB41Q5SVQ8 909 aa6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 TDRD10Q5VZ19 366 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 ARMCX6Q7L4S7 300 aa6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 KIAA0907Q7Z7F0 614 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 ADGRA1Q86SQ6 560 aa6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 HOMER1Q86YM7 354 aa6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 CCDC146Q8IYE0 955 aa6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 LRRC47Q8N1G4 583 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 PRPF38AQ8NAV1 312 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 SPATA5Q8NB90 893 aa6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 COPS5Q92905 334 aa6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 GPATCH3Q96I76 525 aa6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 EDEM2Q9BV94 578 aa6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 SPATA9Q9BWV2 254 aa6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 ARRDC1-AS1Q9H2J1 176 aa6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 SUDS3Q9H7L9 328 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 AKTIPQ9H8T0 292 aa6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 UPF2Q9HAU5 1272 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 SLC38A10Q9HBR0 1119 aa6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 SSU72Q9NP77 194 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 LTB4R2Q9NPC1 389 aa6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 HMG20BQ9P0W2 317 aa6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 PCOLCE2Q9UKZ9 415 aa6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 MIA3Q5JRA6 1907 aa6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 CACNA1FO60840 1977 aa6.2□□□□□ -1.42
ECHDC1-206ENST00000417628 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 PIK3R2O00459 728 aa6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 NCAM2O15394 837 aa6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 LRIG2O94898 1065 aa6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 TP53P04637 393 aaPredicted RBP6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 NBPF7P0C2Y1 421 aaPredicted RBP6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 CASQ1P31415 396 aa6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 GBP1P32455 592 aa6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 CNR2P34972 360 aa6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 TNNT3P45378 269 aaPredicted RBP6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 IRX1P78414 480 aaPredicted RBP6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 CFHR1Q03591 330 aa6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 PRKCQQ04759 706 aa6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 MTAPQ13126 283 aa6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 MVPQ14764 893 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 TERF2Q15554 542 aa6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 ZRSR2Q15696 482 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 LETM2Q2VYF4 491 aa6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 TKFCQ3LXA3 575 aa6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 BBS9Q3SYG4 887 aa6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 HSP90B2PQ58FF3 399 aa6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 SPOUT1Q5T280 376 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 LRCH2Q5VUJ6 765 aa6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 CDPF1Q6NVV7 123 aa6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 DNAJB8Q8NHS0 232 aa6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 SCFD2Q8WU76 684 aa6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 MRPS27Q92552 414 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 CLDN23Q96B33 292 aa6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 MYADMQ96S97 322 aa6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 EPN3Q9H201 632 aa6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 RNF146Q9NTX7 359 aa6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 NOP53Q9NZM5 478 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 EPS15L1Q9UBC2 864 aa6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 PUF60Q9UHX1 559 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 DOPEY1Q5JWR5 2465 aa6.19□□□□□ -1.42
ECHDC1-206ENST00000417628 AKAP13Q12802 2813 aa6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 WDFY3Q8IZQ1 3526 aa6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 C4orf47A7E2U8 309 aa6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 CBFA2T2O43439 604 aa6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 N4BP1O75113 896 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 CLASP2O75122 1294 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 CLEC3AO75596 197 aa6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 CIAO1O76071 339 aa6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 EPN2O95208 641 aa6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 ZRANB2O95218 330 aaKnown RBP eCLIP6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 F2P00734 622 aa6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 TXNP10599 105 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 GP1BBP13224 206 aa6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 EEF2P13639 858 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 CASTP20810 708 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 COL8A1P27658 744 aa6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 NOS3P29474 1203 aa6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 ALDH5A1P51649 535 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 SRSF5Q13243 272 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 SNW1Q13573 536 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 SMC1AQ14683 1233 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 RABEP1Q15276 862 aa6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 KIAA0753Q2KHM9 967 aa6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 RSPO2Q6UXX9 243 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 TMC5Q6UXY8 1006 aa6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 C16orf86Q6ZW13 317 aa6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 CEP68Q76N32 757 aa6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 GPR149Q86SP6 731 aa6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 FAM181AQ8N9Y4 354 aa6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 COLGALT1Q8NBJ5 622 aa6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 RIN3Q8TB24 985 aa6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 FAM46AQ96IP4 442 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 LOXL4Q96JB6 756 aa6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 ZNF512BQ96KM6 892 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 PSMG3-AS1Q96PY0 264 aa6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 NUP88Q99567 741 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-206ENST00000417628 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms