RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 ZNF560Q96MR9 790 aa11.95□□□□□ -0.5
TM9SF4-203ENST00000417389 NECTIN4Q96NY8 510 aa11.95□□□□□ -0.5
TM9SF4-203ENST00000417389 CLSTN3Q9BQT9 956 aa11.95□□□□□ -0.5
TM9SF4-203ENST00000417389 MTMR12Q9C0I1 747 aa11.95□□□□□ -0.5
TM9SF4-203ENST00000417389 S1PR5Q9H228 398 aa11.95□□□□□ -0.5
TM9SF4-203ENST00000417389 PLEKHA4Q9H4M7 779 aa11.95□□□□□ -0.5
TM9SF4-203ENST00000417389 MTRRQ9UBK8 725 aa11.95□□□□□ -0.5
TM9SF4-203ENST00000417389 PRKAG3Q9UGI9 489 aa11.95□□□□□ -0.5
TM9SF4-203ENST00000417389 CDH22Q9UJ99 828 aa11.95□□□□□ -0.5
TM9SF4-203ENST00000417389 PCDHB8Q9UN66 801 aa11.95□□□□□ -0.5
TM9SF4-203ENST00000417389 AGAP1Q9UPQ3 857 aa11.95□□□□□ -0.5
TM9SF4-203ENST00000417389 VCANP13611 3396 aa11.95□□□□□ -0.5
TM9SF4-203ENST00000417389 PRRG1O14668 218 aa11.94□□□□□ -0.5
TM9SF4-203ENST00000417389 ADAM12O43184 909 aa11.94□□□□□ -0.5
TM9SF4-203ENST00000417389 RFPL2O75678 378 aa11.94□□□□□ -0.5
TM9SF4-203ENST00000417389 RHOBTB3O94955 611 aa11.94□□□□□ -0.5
TM9SF4-203ENST00000417389 LILRA4P59901 499 aa11.94□□□□□ -0.5
TM9SF4-203ENST00000417389 DUOXA2Q1HG44 320 aa11.94□□□□□ -0.5
TM9SF4-203ENST00000417389 SV2CQ496J9 727 aa11.94□□□□□ -0.5
TM9SF4-203ENST00000417389 PPM1LQ5SGD2 360 aa11.94□□□□□ -0.5
TM9SF4-203ENST00000417389 CEP135Q66GS9 1140 aa11.94□□□□□ -0.5
TM9SF4-203ENST00000417389 SMG7Q92540 1137 aaKnown RBP11.94□□□□□ -0.5
TM9SF4-203ENST00000417389 ERCC4Q92889 916 aaPredicted RBP11.94□□□□□ -0.5
TM9SF4-203ENST00000417389 FAM84AQ96KN4 292 aa11.94□□□□□ -0.5
TM9SF4-203ENST00000417389 SENP8Q96LD8 212 aa11.94□□□□□ -0.5
TM9SF4-203ENST00000417389 PHF7Q9BWX1 381 aaPredicted RBP11.94□□□□□ -0.5
TM9SF4-203ENST00000417389 FRMD4BQ9Y2L6 1034 aa11.94□□□□□ -0.5
TM9SF4-203ENST00000417389 BACE2Q9Y5Z0 518 aa11.94□□□□□ -0.5
TM9SF4-203ENST00000417389 CYB561D2O14569 222 aa11.93□□□□□ -0.5
TM9SF4-203ENST00000417389 PHACTR2O75167 634 aa11.93□□□□□ -0.5
TM9SF4-203ENST00000417389 PRPF40AO75400 957 aaKnown RBP11.93□□□□□ -0.5
TM9SF4-203ENST00000417389 NR3C1P04150 777 aa11.93□□□□□ -0.5
TM9SF4-203ENST00000417389 C8AP07357 584 aa11.93□□□□□ -0.5
TM9SF4-203ENST00000417389 PAX3P23760 479 aa11.93□□□□□ -0.5
TM9SF4-203ENST00000417389 PNPLA4P41247 253 aa11.93□□□□□ -0.5
TM9SF4-203ENST00000417389 WNT7BP56706 349 aa11.93□□□□□ -0.5
TM9SF4-203ENST00000417389 RBP5P82980 135 aa11.93□□□□□ -0.5
TM9SF4-203ENST00000417389 ROR1Q01973 937 aa11.93□□□□□ -0.5
TM9SF4-203ENST00000417389 ZP2Q05996 745 aa11.93□□□□□ -0.5
TM9SF4-203ENST00000417389 MYO1EQ12965 1108 aa11.93□□□□□ -0.5
TM9SF4-203ENST00000417389 SNW1Q13573 536 aaKnown RBP11.93□□□□□ -0.5
TM9SF4-203ENST00000417389 RAB33AQ14088 237 aa11.93□□□□□ -0.5
TM9SF4-203ENST00000417389 KCNB1Q14721 858 aa11.93□□□□□ -0.5
TM9SF4-203ENST00000417389 ISM2Q6H9L7 571 aa11.93□□□□□ -0.5
TM9SF4-203ENST00000417389 OVOS1Q6IE37 1185 aa11.93□□□□□ -0.5
TM9SF4-203ENST00000417389 CCDC149Q6ZUS6 474 aa11.93□□□□□ -0.5
TM9SF4-203ENST00000417389 SMYD4Q8IYR2 804 aaPredicted RBP11.93□□□□□ -0.5
TM9SF4-203ENST00000417389 THEM5Q8N1Q8 247 aa11.93□□□□□ -0.5
TM9SF4-203ENST00000417389 SLC7A14Q8TBB6 771 aa11.93□□□□□ -0.5
TM9SF4-203ENST00000417389 POMKQ9H5K3 350 aa11.93□□□□□ -0.5
TM9SF4-203ENST00000417389 CYP4F11Q9HBI6 524 aa11.93□□□□□ -0.5
TM9SF4-203ENST00000417389 INTS13Q9NVM9 706 aa11.93□□□□□ -0.5
TM9SF4-203ENST00000417389 FBXL5Q9UKA1 691 aa11.93□□□□□ -0.5
TM9SF4-203ENST00000417389 ITGA11Q9UKX5 1188 aa11.93□□□□□ -0.5
TM9SF4-203ENST00000417389 NR2E1Q9Y466 385 aa11.93□□□□□ -0.5
TM9SF4-203ENST00000417389 BDP1A6H8Y1 2624 aa11.93□□□□□ -0.5
TM9SF4-203ENST00000417389 ANO9A1A5B4 782 aa11.92□□□□□ -0.5
TM9SF4-203ENST00000417389 KPNA7A9QM74 516 aa11.92□□□□□ -0.5
TM9SF4-203ENST00000417389 M0QZQ0 153 aa11.92□□□□□ -0.5
TM9SF4-203ENST00000417389 PIRO00625 290 aa11.92□□□□□ -0.5
TM9SF4-203ENST00000417389 PDXKO00764 312 aa11.92□□□□□ -0.5
TM9SF4-203ENST00000417389 SPTLC1O15269 473 aa11.92□□□□□ -0.5
TM9SF4-203ENST00000417389 CCL16O15467 120 aa11.92□□□□□ -0.5
TM9SF4-203ENST00000417389 XYLBO75191 536 aa11.92□□□□□ -0.5
TM9SF4-203ENST00000417389 LRG1P02750 347 aa11.92□□□□□ -0.5
TM9SF4-203ENST00000417389 UBE2HP62256 183 aa11.92□□□□□ -0.5
TM9SF4-203ENST00000417389 CYP24A1Q07973 514 aa11.92□□□□□ -0.5
TM9SF4-203ENST00000417389 BIRC3Q13489 604 aa11.92□□□□□ -0.5
TM9SF4-203ENST00000417389 TRPC3Q13507 836 aa11.92□□□□□ -0.5
TM9SF4-203ENST00000417389 STIM1Q13586 685 aa11.92□□□□□ -0.5
TM9SF4-203ENST00000417389 RSPO2Q6UXX9 243 aaPredicted RBP11.92□□□□□ -0.5
TM9SF4-203ENST00000417389 GPR149Q86SP6 731 aa11.92□□□□□ -0.5
TM9SF4-203ENST00000417389 WDR49Q8IV35 697 aa11.92□□□□□ -0.5
TM9SF4-203ENST00000417389 C1orf127Q8N9H9 656 aa11.92□□□□□ -0.5
TM9SF4-203ENST00000417389 ENGASEQ8NFI3 743 aa11.92□□□□□ -0.5
TM9SF4-203ENST00000417389 HDAC7Q8WUI4 952 aa11.92□□□□□ -0.5
TM9SF4-203ENST00000417389 SUSD6Q92537 303 aa11.92□□□□□ -0.5
TM9SF4-203ENST00000417389 TIGD1Q96MW7 591 aa11.92□□□□□ -0.5
TM9SF4-203ENST00000417389 PGLYRP2Q96PD5 576 aa11.92□□□□□ -0.5
TM9SF4-203ENST00000417389 TSG101Q99816 390 aa11.92□□□□□ -0.5
TM9SF4-203ENST00000417389 ZDHHC7Q9NXF8 308 aa11.92□□□□□ -0.5
TM9SF4-203ENST00000417389 FBXW11Q9UKB1 542 aa11.92□□□□□ -0.5
TM9SF4-203ENST00000417389 DSEQ9UL01 958 aa11.92□□□□□ -0.5
TM9SF4-203ENST00000417389 NCOR1O75376 2440 aa11.91□□□□□ -0.5
TM9SF4-203ENST00000417389 HUS1O60921 280 aa11.91□□□□□ -0.5
TM9SF4-203ENST00000417389 ZMYND10O75800 440 aa11.91□□□□□ -0.5
TM9SF4-203ENST00000417389 OR4Q2P0C623 313 aa11.91□□□□□ -0.5
TM9SF4-203ENST00000417389 TYMPP19971 482 aa11.91□□□□□ -0.5
TM9SF4-203ENST00000417389 NR2F2P24468 414 aa11.91□□□□□ -0.5
TM9SF4-203ENST00000417389 RPL13P26373 211 aaKnown RBP11.91□□□□□ -0.5
TM9SF4-203ENST00000417389 GBP2P32456 591 aaPredicted RBP11.91□□□□□ -0.5
TM9SF4-203ENST00000417389 ADCY1Q08828 1119 aa11.91□□□□□ -0.5
TM9SF4-203ENST00000417389 PSMD6Q15008 389 aa11.91□□□□□ -0.5
TM9SF4-203ENST00000417389 SLC8B1Q6J4K2 584 aa11.91□□□□□ -0.5
TM9SF4-203ENST00000417389 LILRA6Q6PI73 481 aa11.91□□□□□ -0.5
TM9SF4-203ENST00000417389 C15orf39Q6ZRI6 1047 aa11.91□□□□□ -0.5
TM9SF4-203ENST00000417389 C12orf56Q8IXR9 622 aa11.91□□□□□ -0.5
TM9SF4-203ENST00000417389 GUF1Q8N442 669 aaKnown RBP11.91□□□□□ -0.5
TM9SF4-203ENST00000417389 TDRD5Q8NAT2 981 aaKnown RBP11.91□□□□□ -0.5
TM9SF4-203ENST00000417389 OR5B17Q8NGF7 314 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms