RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 KINO60870 393 aaKnown RBP16.13■□□□□ 0.17
RPS28-201ENST00000417088 VNN2O95498 520 aa16.13■□□□□ 0.17
RPS28-201ENST00000417088 GJA1P17302 382 aa16.13■□□□□ 0.17
RPS28-201ENST00000417088 CYP3A5P20815 502 aa16.13■□□□□ 0.17
RPS28-201ENST00000417088 GJB2P29033 226 aa16.13■□□□□ 0.17
RPS28-201ENST00000417088 RPS9P46781 194 aaKnown RBP16.13■□□□□ 0.17
RPS28-201ENST00000417088 GUCY2FP51841 1108 aa16.13■□□□□ 0.17
RPS28-201ENST00000417088 EPHA5P54756 1037 aa16.13■□□□□ 0.17
RPS28-201ENST00000417088 YWHAHQ04917 246 aaPredicted RBP16.13■□□□□ 0.17
RPS28-201ENST00000417088 ZNF687Q8N1G0 1237 aa16.13■□□□□ 0.17
RPS28-201ENST00000417088 DCLK2Q8N568 766 aa16.13■□□□□ 0.17
RPS28-201ENST00000417088 LRRC15Q8TF66 581 aa16.13■□□□□ 0.17
RPS28-201ENST00000417088 SMARCD2Q92925 531 aa16.13■□□□□ 0.17
RPS28-201ENST00000417088 BICD1Q96G01 975 aa16.13■□□□□ 0.17
RPS28-201ENST00000417088 REEP2Q9BRK0 252 aa16.13■□□□□ 0.17
RPS28-201ENST00000417088 TRMT61BQ9BVS5 477 aaKnown RBP16.13■□□□□ 0.17
RPS28-201ENST00000417088 BRD9Q9H8M2 597 aa16.13■□□□□ 0.17
RPS28-201ENST00000417088 ODF2LQ9ULJ1 636 aa16.13■□□□□ 0.17
RPS28-201ENST00000417088 MRPS17Q9Y2R5 130 aaKnown RBP16.13■□□□□ 0.17
RPS28-201ENST00000417088 YIPF1Q9Y548 306 aa16.13■□□□□ 0.17
RPS28-201ENST00000417088 FRYLO94915 3013 aa16.12■□□□□ 0.17
RPS28-201ENST00000417088 CD2BP2O95400 341 aaKnown RBP16.12■□□□□ 0.17
RPS28-201ENST00000417088 PIGRP01833 764 aa16.12■□□□□ 0.17
RPS28-201ENST00000417088 ADRB2P07550 413 aa16.12■□□□□ 0.17
RPS28-201ENST00000417088 OR4Q2P0C623 313 aa16.12■□□□□ 0.17
RPS28-201ENST00000417088 MYL4P12829 197 aa16.12■□□□□ 0.17
RPS28-201ENST00000417088 VIPR2P41587 438 aa16.12■□□□□ 0.17
RPS28-201ENST00000417088 LIG4P49917 911 aa16.12■□□□□ 0.17
RPS28-201ENST00000417088 PPP2R3AQ06190 1150 aa16.12■□□□□ 0.17
RPS28-201ENST00000417088 ENOX2Q16206 610 aaKnown RBP16.12■□□□□ 0.17
RPS28-201ENST00000417088 KYAT1Q16773 422 aa16.12■□□□□ 0.17
RPS28-201ENST00000417088 VITQ6UXI7 678 aa16.12■□□□□ 0.17
RPS28-201ENST00000417088 GPBP1Q86WP2 473 aa16.12■□□□□ 0.17
RPS28-201ENST00000417088 MAP4K3Q8IVH8 894 aa16.12■□□□□ 0.17
RPS28-201ENST00000417088 LEMD2Q8NC56 503 aa16.12■□□□□ 0.17
RPS28-201ENST00000417088 RMDN1Q96DB5 314 aa16.12■□□□□ 0.17
RPS28-201ENST00000417088 BORCS6Q96GS4 357 aa16.12■□□□□ 0.17
RPS28-201ENST00000417088 AK8Q96MA6 479 aa16.12■□□□□ 0.17
RPS28-201ENST00000417088 PGLYRP2Q96PD5 576 aa16.12■□□□□ 0.17
RPS28-201ENST00000417088 HINFPQ9BQA5 517 aa16.12■□□□□ 0.17
RPS28-201ENST00000417088 CRISPLD1Q9H336 500 aa16.12■□□□□ 0.17
RPS28-201ENST00000417088 ASAH2Q9NR71 780 aa16.12■□□□□ 0.17
RPS28-201ENST00000417088 TBX20Q9UMR3 447 aa16.12■□□□□ 0.17
RPS28-201ENST00000417088 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.12■□□□□ 0.17
RPS28-201ENST00000417088 DMXL1Q9Y485 3027 aa16.12■□□□□ 0.17
RPS28-201ENST00000417088 PATJQ8NI35 1801 aa16.12■□□□□ 0.17
RPS28-201ENST00000417088 MAN2B1O00754 1011 aa16.11■□□□□ 0.17
RPS28-201ENST00000417088 PPEF2O14830 753 aa16.11■□□□□ 0.17
RPS28-201ENST00000417088 SPTLC1O15269 473 aa16.11■□□□□ 0.17
RPS28-201ENST00000417088 OGTO15294 1046 aa16.11■□□□□ 0.17
RPS28-201ENST00000417088 SLC26A4O43511 780 aa16.11■□□□□ 0.17
RPS28-201ENST00000417088 PSMC3P17980 439 aa16.11■□□□□ 0.17
RPS28-201ENST00000417088 ZNF131P52739 623 aa16.11■□□□□ 0.17
RPS28-201ENST00000417088 DHX8Q14562 1220 aaKnown RBP16.11■□□□□ 0.17
RPS28-201ENST00000417088 DSTYKQ6XUX3 929 aa16.11■□□□□ 0.17
RPS28-201ENST00000417088 MYCT1Q8N699 235 aa16.11■□□□□ 0.17
RPS28-201ENST00000417088 ZBTB44Q8NCP5 570 aa16.11■□□□□ 0.17
RPS28-201ENST00000417088 SHKBP1Q8TBC3 707 aa16.11■□□□□ 0.17
RPS28-201ENST00000417088 ZSCAN18Q8TBC5 510 aaPredicted RBP16.11■□□□□ 0.17
RPS28-201ENST00000417088 NELL1Q92832 810 aa16.11■□□□□ 0.17
RPS28-201ENST00000417088 IRF7Q92985 503 aa16.11■□□□□ 0.17
RPS28-201ENST00000417088 CALML4Q96GE6 196 aa16.11■□□□□ 0.17
RPS28-201ENST00000417088 LRRC3Q9BY71 257 aa16.11■□□□□ 0.17
RPS28-201ENST00000417088 OXCT2Q9BYC2 517 aaPredicted RBP16.11■□□□□ 0.17
RPS28-201ENST00000417088 RPF1Q9H9Y2 349 aaKnown RBP16.11■□□□□ 0.17
RPS28-201ENST00000417088 TRPV4Q9HBA0 871 aa16.11■□□□□ 0.17
RPS28-201ENST00000417088 ZNF334Q9HCZ1 680 aaPredicted RBP16.11■□□□□ 0.17
RPS28-201ENST00000417088 TRPV5Q9NQA5 729 aa16.11■□□□□ 0.17
RPS28-201ENST00000417088 BLOC1S4Q9NUP1 217 aa16.11■□□□□ 0.17
RPS28-201ENST00000417088 PCDHGA2Q9Y5H1 932 aa16.11■□□□□ 0.17
RPS28-201ENST00000417088 NCANO14594 1321 aa16.11■□□□□ 0.17
RPS28-201ENST00000417088 A0A0B4J269 797 aa16.1■□□□□ 0.17
RPS28-201ENST00000417088 OR6C75A6NL08 312 aa16.1■□□□□ 0.17
RPS28-201ENST00000417088 K7ENM7 598 aa16.1■□□□□ 0.17
RPS28-201ENST00000417088 HNRNPDLO14979 420 aaKnown RBP16.1■□□□□ 0.17
RPS28-201ENST00000417088 XPOTO43592 962 aaKnown RBP16.1■□□□□ 0.17
RPS28-201ENST00000417088 GDI1P31150 447 aa16.1■□□□□ 0.17
RPS28-201ENST00000417088 UBA7P41226 1012 aa16.1■□□□□ 0.17
RPS28-201ENST00000417088 DUSP4Q13115 394 aa16.1■□□□□ 0.17
RPS28-201ENST00000417088 MTAPQ13126 283 aa16.1■□□□□ 0.17
RPS28-201ENST00000417088 GPR17Q13304 367 aa16.1■□□□□ 0.17
RPS28-201ENST00000417088 MCM6Q14566 821 aa16.1■□□□□ 0.17
RPS28-201ENST00000417088 TEAD2Q15562 447 aa16.1■□□□□ 0.17
RPS28-201ENST00000417088 SPATA1Q5VX52 437 aa16.1■□□□□ 0.17
RPS28-201ENST00000417088 TSSK4Q6SA08 328 aa16.1■□□□□ 0.17
RPS28-201ENST00000417088 USP37Q86T82 979 aa16.1■□□□□ 0.17
RPS28-201ENST00000417088 TMC8Q8IU68 726 aa16.1■□□□□ 0.17
RPS28-201ENST00000417088 DEPDC1BQ8WUY9 529 aa16.1■□□□□ 0.17
RPS28-201ENST00000417088 ATRIPQ8WXE1 791 aa16.1■□□□□ 0.17
RPS28-201ENST00000417088 TSPAN18Q96SJ8 248 aa16.1■□□□□ 0.17
RPS28-201ENST00000417088 FIZ1Q96SL8 496 aa16.1■□□□□ 0.17
RPS28-201ENST00000417088 DNAJC25Q9H1X3 360 aa16.1■□□□□ 0.17
RPS28-201ENST00000417088 PARVGQ9HBI0 331 aa16.1■□□□□ 0.17
RPS28-201ENST00000417088 PRMT8Q9NR22 394 aaPredicted RBP16.1■□□□□ 0.17
RPS28-201ENST00000417088 ZSCAN32Q9NX65 697 aa16.1■□□□□ 0.17
RPS28-201ENST00000417088 NDRG2Q9UN36 371 aaKnown RBP16.1■□□□□ 0.17
RPS28-201ENST00000417088 TRAK2O60296 914 aa16.09■□□□□ 0.17
RPS28-201ENST00000417088 LILRB5O75023 590 aa16.09■□□□□ 0.17
RPS28-201ENST00000417088 FAM13AO94988 1023 aa16.09■□□□□ 0.17
RPS28-201ENST00000417088 PLCG1P19174 1290 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms