RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 SNX21Q969T3 373 aa16.41■□□□□ 0.22
UBXN4-203ENST00000416538 TCEAL4Q96EI5 215 aa16.41■□□□□ 0.22
UBXN4-203ENST00000416538 FAM212AQ96EL1 285 aa16.41■□□□□ 0.22
UBXN4-203ENST00000416538 KXD1Q9BQD3 176 aa16.41■□□□□ 0.22
UBXN4-203ENST00000416538 PANK2Q9BZ23 570 aa16.41■□□□□ 0.22
UBXN4-203ENST00000416538 MFSD1Q9H3U5 465 aa16.41■□□□□ 0.22
UBXN4-203ENST00000416538 CCDC39Q9UFE4 941 aa16.41■□□□□ 0.22
UBXN4-203ENST00000416538 FBXL21Q9UKT6 434 aa16.41■□□□□ 0.22
UBXN4-203ENST00000416538 H0Y858 1186 aa16.4■□□□□ 0.22
UBXN4-203ENST00000416538 H7C4K7 107 aa16.4■□□□□ 0.22
UBXN4-203ENST00000416538 SCP2P22307 547 aa16.4■□□□□ 0.22
UBXN4-203ENST00000416538 CLCN5P51795 746 aa16.4■□□□□ 0.22
UBXN4-203ENST00000416538 ADCY1Q08828 1119 aa16.4■□□□□ 0.22
UBXN4-203ENST00000416538 PKP1Q13835 747 aa16.4■□□□□ 0.22
UBXN4-203ENST00000416538 E2F4Q16254 413 aa16.4■□□□□ 0.22
UBXN4-203ENST00000416538 FOXD4L5Q5VV16 416 aaPredicted RBP16.4■□□□□ 0.22
UBXN4-203ENST00000416538 C9orf57Q5W0N0 161 aa16.4■□□□□ 0.22
UBXN4-203ENST00000416538 SCARA3Q6AZY7 606 aa16.4■□□□□ 0.22
UBXN4-203ENST00000416538 TTC9BQ8N6N2 239 aa16.4■□□□□ 0.22
UBXN4-203ENST00000416538 PDILTQ8N807 584 aa16.4■□□□□ 0.22
UBXN4-203ENST00000416538 GLIS3Q8NEA6 775 aa16.4■□□□□ 0.22
UBXN4-203ENST00000416538 BEST2Q8NFU1 509 aa16.4■□□□□ 0.22
UBXN4-203ENST00000416538 FOXD4L4Q8WXT5 416 aaPredicted RBP16.4■□□□□ 0.22
UBXN4-203ENST00000416538 TMEM209Q96SK2 561 aa16.4■□□□□ 0.22
UBXN4-203ENST00000416538 CYP4F11Q9HBI6 524 aa16.4■□□□□ 0.22
UBXN4-203ENST00000416538 SLC2A4RGQ9NR83 387 aa16.4■□□□□ 0.22
UBXN4-203ENST00000416538 CEP72Q9P209 647 aa16.4■□□□□ 0.22
UBXN4-203ENST00000416538 WNT16Q9UBV4 365 aa16.4■□□□□ 0.22
UBXN4-203ENST00000416538 USP34Q70CQ2 3546 aa16.4■□□□□ 0.22
UBXN4-203ENST00000416538 NCANO14594 1321 aa16.4■□□□□ 0.22
UBXN4-203ENST00000416538 ANO9A1A5B4 782 aa16.39■□□□□ 0.21
UBXN4-203ENST00000416538 PRRG1O14668 218 aa16.39■□□□□ 0.21
UBXN4-203ENST00000416538 MOSPD3O75425 235 aa16.39■□□□□ 0.21
UBXN4-203ENST00000416538 OAZ2O95190 189 aa16.39■□□□□ 0.21
UBXN4-203ENST00000416538 STAT6P42226 847 aa16.39■□□□□ 0.21
UBXN4-203ENST00000416538 YWHAHQ04917 246 aaPredicted RBP16.39■□□□□ 0.21
UBXN4-203ENST00000416538 TMEM132DQ14C87 1099 aa16.39■□□□□ 0.21
UBXN4-203ENST00000416538 KYAT1Q16773 422 aa16.39■□□□□ 0.21
UBXN4-203ENST00000416538 ADALQ6DHV7 355 aa16.39■□□□□ 0.21
UBXN4-203ENST00000416538 RTL10Q7L3V2 364 aa16.39■□□□□ 0.21
UBXN4-203ENST00000416538 HS6ST3Q8IZP7 471 aa16.39■□□□□ 0.21
UBXN4-203ENST00000416538 APPL2Q8NEU8 664 aa16.39■□□□□ 0.21
UBXN4-203ENST00000416538 OR10T2Q8NGX3 314 aa16.39■□□□□ 0.21
UBXN4-203ENST00000416538 NXPE3Q969Y0 559 aa16.39■□□□□ 0.21
UBXN4-203ENST00000416538 HVCN1Q96D96 273 aa16.39■□□□□ 0.21
UBXN4-203ENST00000416538 PGLYRP2Q96PD5 576 aa16.39■□□□□ 0.21
UBXN4-203ENST00000416538 PRRX2Q99811 253 aa16.39■□□□□ 0.21
UBXN4-203ENST00000416538 ZSCAN16Q9H4T2 348 aaPredicted RBP16.39■□□□□ 0.21
UBXN4-203ENST00000416538 MRPL44Q9H9J2 332 aaKnown RBP16.39■□□□□ 0.21
UBXN4-203ENST00000416538 TBC1D17Q9HA65 648 aa16.39■□□□□ 0.21
UBXN4-203ENST00000416538 ARHGEF3Q9NR81 526 aa16.39■□□□□ 0.21
UBXN4-203ENST00000416538 TFIP11Q9UBB9 837 aaKnown RBP16.39■□□□□ 0.21
UBXN4-203ENST00000416538 AFF4Q9UHB7 1163 aaKnown RBP16.39■□□□□ 0.21
UBXN4-203ENST00000416538 AGO2Q9UKV8 859 aaKnown RBP16.39■□□□□ 0.21
UBXN4-203ENST00000416538 YIPF1Q9Y548 306 aa16.39■□□□□ 0.21
UBXN4-203ENST00000416538 ZFP37Q9Y6Q3 630 aaPredicted RBP16.39■□□□□ 0.21
UBXN4-203ENST00000416538 F5P12259 2224 aa16.39■□□□□ 0.21
UBXN4-203ENST00000416538 PTPRDP23468 1912 aa16.39■□□□□ 0.21
UBXN4-203ENST00000416538 PIRO00625 290 aa16.38■□□□□ 0.21
UBXN4-203ENST00000416538 LRG1P02750 347 aa16.38■□□□□ 0.21
UBXN4-203ENST00000416538 CPB1P15086 417 aa16.38■□□□□ 0.21
UBXN4-203ENST00000416538 FCARP24071 287 aa16.38■□□□□ 0.21
UBXN4-203ENST00000416538 TXLNAP40222 546 aa16.38■□□□□ 0.21
UBXN4-203ENST00000416538 LILRA4P59901 499 aa16.38■□□□□ 0.21
UBXN4-203ENST00000416538 GPC5P78333 572 aa16.38■□□□□ 0.21
UBXN4-203ENST00000416538 STK38Q15208 465 aa16.38■□□□□ 0.21
UBXN4-203ENST00000416538 L1TD1Q5T7N2 865 aaKnown RBP16.38■□□□□ 0.21
UBXN4-203ENST00000416538 TPGS2Q68CL5 300 aa16.38■□□□□ 0.21
UBXN4-203ENST00000416538 SHC4Q6S5L8 630 aa16.38■□□□□ 0.21
UBXN4-203ENST00000416538 CCDC73Q6ZRK6 1079 aa16.38■□□□□ 0.21
UBXN4-203ENST00000416538 SV2BQ7L1I2 683 aa16.38■□□□□ 0.21
UBXN4-203ENST00000416538 HPS3Q969F9 1004 aa16.38■□□□□ 0.21
UBXN4-203ENST00000416538 RTP3Q9BQQ7 232 aa16.38■□□□□ 0.21
UBXN4-203ENST00000416538 CORO1BQ9BR76 489 aa16.38■□□□□ 0.21
UBXN4-203ENST00000416538 PLA2G2FQ9BZM2 168 aa16.38■□□□□ 0.21
UBXN4-203ENST00000416538 DNAJC25Q9H1X3 360 aa16.38■□□□□ 0.21
UBXN4-203ENST00000416538 AVENQ9NQS1 362 aaPredicted RBP16.38■□□□□ 0.21
UBXN4-203ENST00000416538 OLFML3Q9NRN5 406 aa16.38■□□□□ 0.21
UBXN4-203ENST00000416538 SEL1LQ9UBV2 794 aa16.38■□□□□ 0.21
UBXN4-203ENST00000416538 KCNH3Q9ULD8 1083 aa16.38■□□□□ 0.21
UBXN4-203ENST00000416538 MRPS23Q9Y3D9 190 aaKnown RBP16.38■□□□□ 0.21
UBXN4-203ENST00000416538 FAM186AA6NE01 2351 aa16.37■□□□□ 0.21
UBXN4-203ENST00000416538 GREB1Q4ZG55 1949 aa16.37■□□□□ 0.21
UBXN4-203ENST00000416538 DMDP11532 3685 aa16.37■□□□□ 0.21
UBXN4-203ENST00000416538 ZNF638Q14966 1978 aaKnown RBP16.37■□□□□ 0.21
UBXN4-203ENST00000416538 GCNT3O95395 438 aa16.37■□□□□ 0.21
UBXN4-203ENST00000416538 IDEP14735 1019 aa16.37■□□□□ 0.21
UBXN4-203ENST00000416538 GAP43P17677 238 aa16.37■□□□□ 0.21
UBXN4-203ENST00000416538 CDR1P51861 262 aa16.37■□□□□ 0.21
UBXN4-203ENST00000416538 TWF1Q12792 350 aa16.37■□□□□ 0.21
UBXN4-203ENST00000416538 CCDC105Q8IYK2 499 aa16.37■□□□□ 0.21
UBXN4-203ENST00000416538 POMGNT1Q8WZA1 660 aa16.37■□□□□ 0.21
UBXN4-203ENST00000416538 SAAL1Q96ER3 474 aa16.37■□□□□ 0.21
UBXN4-203ENST00000416538 MCRS1Q96EZ8 462 aa16.37■□□□□ 0.21
UBXN4-203ENST00000416538 SENP8Q96LD8 212 aa16.37■□□□□ 0.21
UBXN4-203ENST00000416538 CBWD1Q9BRT8 395 aa16.37■□□□□ 0.21
UBXN4-203ENST00000416538 FOXQ1Q9C009 403 aa16.37■□□□□ 0.21
UBXN4-203ENST00000416538 C2CD2Q9Y426 696 aa16.37■□□□□ 0.21
UBXN4-203ENST00000416538 RIF1Q5UIP0 2472 aaKnown RBP16.37■□□□□ 0.21
UBXN4-203ENST00000416538 ZFHX2Q9C0A1 2572 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms