RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 INVSQ9Y283 1065 aa10.27□□□□□ -0.77
LINC01238-201ENST00000416204 SLC27A5Q9Y2P5 690 aa10.27□□□□□ -0.77
LINC01238-201ENST00000416204 YIPF1Q9Y548 306 aa10.27□□□□□ -0.77
LINC01238-201ENST00000416204 LAMA5O15230 3695 aa10.27□□□□□ -0.77
LINC01238-201ENST00000416204 MYBPHLA2RUH7 354 aa10.26□□□□□ -0.77
LINC01238-201ENST00000416204 C4orf47A7E2U8 309 aa10.26□□□□□ -0.77
LINC01238-201ENST00000416204 H7C4K7 107 aa10.26□□□□□ -0.77
LINC01238-201ENST00000416204 CHADO15335 359 aa10.26□□□□□ -0.77
LINC01238-201ENST00000416204 MEFVO15553 781 aaPredicted RBP10.26□□□□□ -0.77
LINC01238-201ENST00000416204 MICAL2O94851 1124 aa10.26□□□□□ -0.77
LINC01238-201ENST00000416204 VNN2O95498 520 aa10.26□□□□□ -0.77
LINC01238-201ENST00000416204 PRAMEF12O95522 483 aa10.26□□□□□ -0.77
LINC01238-201ENST00000416204 MCM4P33991 863 aa10.26□□□□□ -0.77
LINC01238-201ENST00000416204 MPLP40238 635 aa10.26□□□□□ -0.77
LINC01238-201ENST00000416204 SPAG1Q07617 926 aa10.26□□□□□ -0.77
LINC01238-201ENST00000416204 ZNF252P-AS1Q0IIN9 211 aa10.26□□□□□ -0.77
LINC01238-201ENST00000416204 CCINQ13939 588 aa10.26□□□□□ -0.77
LINC01238-201ENST00000416204 ACAP1Q15027 740 aa10.26□□□□□ -0.77
LINC01238-201ENST00000416204 SEZ6Q53EL9 994 aa10.26□□□□□ -0.77
LINC01238-201ENST00000416204 NAIF1Q69YI7 327 aaPredicted RBP10.26□□□□□ -0.77
LINC01238-201ENST00000416204 CPLX2Q6PUV4 134 aaKnown RBP10.26□□□□□ -0.77
LINC01238-201ENST00000416204 RTL10Q7L3V2 364 aa10.26□□□□□ -0.77
LINC01238-201ENST00000416204 CACNA2D4Q7Z3S7 1137 aa10.26□□□□□ -0.77
LINC01238-201ENST00000416204 CATSPER3Q86XQ3 398 aa10.26□□□□□ -0.77
LINC01238-201ENST00000416204 TMC8Q8IU68 726 aa10.26□□□□□ -0.77
LINC01238-201ENST00000416204 ARID3BQ8IVW6 561 aaPredicted RBP10.26□□□□□ -0.77
LINC01238-201ENST00000416204 TTC9BQ8N6N2 239 aa10.26□□□□□ -0.77
LINC01238-201ENST00000416204 MCPH1Q8NEM0 835 aa10.26□□□□□ -0.77
LINC01238-201ENST00000416204 GAB3Q8WWW8 586 aa10.26□□□□□ -0.77
LINC01238-201ENST00000416204 TBC1D32Q96NH3 1257 aa10.26□□□□□ -0.77
LINC01238-201ENST00000416204 HHIPQ96QV1 700 aa10.26□□□□□ -0.77
LINC01238-201ENST00000416204 EDEM2Q9BV94 578 aa10.26□□□□□ -0.77
LINC01238-201ENST00000416204 TMEM60Q9H2L4 133 aa10.26□□□□□ -0.77
LINC01238-201ENST00000416204 C8orf33Q9H7E9 229 aaPredicted RBP10.26□□□□□ -0.77
LINC01238-201ENST00000416204 TRPV4Q9HBA0 871 aa10.26□□□□□ -0.77
LINC01238-201ENST00000416204 ARHGEF35A5YM69 484 aa10.25□□□□□ -0.77
LINC01238-201ENST00000416204 DPYSL4O14531 572 aa10.25□□□□□ -0.77
LINC01238-201ENST00000416204 NEMFO60524 1076 aa10.25□□□□□ -0.77
LINC01238-201ENST00000416204 PAPSS2O95340 614 aaPredicted RBP10.25□□□□□ -0.77
LINC01238-201ENST00000416204 KRT2P35908 639 aa10.25□□□□□ -0.77
LINC01238-201ENST00000416204 NAMPTP43490 491 aa10.25□□□□□ -0.77
LINC01238-201ENST00000416204 RAP1GAPP47736 663 aa10.25□□□□□ -0.77
LINC01238-201ENST00000416204 YARSP54577 528 aaKnown RBP10.25□□□□□ -0.77
LINC01238-201ENST00000416204 CYP4F8P98187 520 aa10.25□□□□□ -0.77
LINC01238-201ENST00000416204 CREB5Q02930 508 aa10.25□□□□□ -0.77
LINC01238-201ENST00000416204 FCHO2Q0JRZ9 810 aa10.25□□□□□ -0.77
LINC01238-201ENST00000416204 DUSP4Q13115 394 aa10.25□□□□□ -0.77
LINC01238-201ENST00000416204 MRPL58Q14197 206 aaKnown RBP10.25□□□□□ -0.77
LINC01238-201ENST00000416204 ZNF568Q3ZCX4 644 aa10.25□□□□□ -0.77
LINC01238-201ENST00000416204 DGKKQ5KSL6 1271 aa10.25□□□□□ -0.77
LINC01238-201ENST00000416204 PLA2G2CQ5R387 149 aa10.25□□□□□ -0.77
LINC01238-201ENST00000416204 SH3PXD2AQ5TCZ1 1133 aa10.25□□□□□ -0.77
LINC01238-201ENST00000416204 TPGS2Q68CL5 300 aa10.25□□□□□ -0.77
LINC01238-201ENST00000416204 ZNF280DQ6N043 979 aa10.25□□□□□ -0.77
LINC01238-201ENST00000416204 DDX12PQ92771 950 aa10.25□□□□□ -0.77
LINC01238-201ENST00000416204 ZNF274Q96GC6 653 aaPredicted RBP10.25□□□□□ -0.77
LINC01238-201ENST00000416204 NAP1L4Q99733 375 aaKnown RBP10.25□□□□□ -0.77
LINC01238-201ENST00000416204 MKNK1Q9BUB5 465 aa10.25□□□□□ -0.77
LINC01238-201ENST00000416204 LRRC3Q9BY71 257 aa10.25□□□□□ -0.77
LINC01238-201ENST00000416204 DNAJC25Q9H1X3 360 aa10.25□□□□□ -0.77
LINC01238-201ENST00000416204 CDT1Q9H211 546 aa10.25□□□□□ -0.77
LINC01238-201ENST00000416204 ZSWIM6Q9HCJ5 1215 aa10.25□□□□□ -0.77
LINC01238-201ENST00000416204 TUBGCP4Q9UGJ1 667 aa10.25□□□□□ -0.77
LINC01238-201ENST00000416204 AFF4Q9UHB7 1163 aaKnown RBP10.25□□□□□ -0.77
LINC01238-201ENST00000416204 CYP46A1Q9Y6A2 500 aa10.25□□□□□ -0.77
LINC01238-201ENST00000416204 FREM2Q5SZK8 3169 aa10.25□□□□□ -0.77
LINC01238-201ENST00000416204 LOC400499M0QZD8 3231 aa10.25□□□□□ -0.77
LINC01238-201ENST00000416204 FASNP49327 2511 aaKnown RBP10.25□□□□□ -0.77
LINC01238-201ENST00000416204 ITPR1Q14643 2758 aa10.24□□□□□ -0.77
LINC01238-201ENST00000416204 CCDC169A6NNP5 214 aa10.24□□□□□ -0.77
LINC01238-201ENST00000416204 SYN3O14994 580 aa10.24□□□□□ -0.77
LINC01238-201ENST00000416204 FOXD2O60548 495 aaPredicted RBP10.24□□□□□ -0.77
LINC01238-201ENST00000416204 MCM7P33993 719 aa10.24□□□□□ -0.77
LINC01238-201ENST00000416204 EPHA5P54756 1037 aa10.24□□□□□ -0.77
LINC01238-201ENST00000416204 CACNB1Q02641 598 aaPredicted RBP10.24□□□□□ -0.77
LINC01238-201ENST00000416204 GPR158Q5T848 1215 aa10.24□□□□□ -0.77
LINC01238-201ENST00000416204 TRIM68Q6AZZ1 485 aa10.24□□□□□ -0.77
LINC01238-201ENST00000416204 ALKAL1Q6UXT8 129 aa10.24□□□□□ -0.77
LINC01238-201ENST00000416204 GAREM2Q75VX8 874 aa10.24□□□□□ -0.77
LINC01238-201ENST00000416204 RALGPS2Q86X27 583 aaPredicted RBP10.24□□□□□ -0.77
LINC01238-201ENST00000416204 TTC16Q8NEE8 873 aa10.24□□□□□ -0.77
LINC01238-201ENST00000416204 TNFRSF25Q93038 417 aa10.24□□□□□ -0.77
LINC01238-201ENST00000416204 TMEM209Q96SK2 561 aa10.24□□□□□ -0.77
LINC01238-201ENST00000416204 CCDC94Q9BW85 323 aaPredicted RBP10.24□□□□□ -0.77
LINC01238-201ENST00000416204 TARS2Q9BW92 718 aaKnown RBP10.24□□□□□ -0.77
LINC01238-201ENST00000416204 ATXN3LQ9H3M9 355 aa10.24□□□□□ -0.77
LINC01238-201ENST00000416204 PDRG1Q9NUG6 133 aa10.24□□□□□ -0.77
LINC01238-201ENST00000416204 ORC3Q9UBD5 711 aaPredicted RBP10.24□□□□□ -0.77
LINC01238-201ENST00000416204 SLC8A2Q9UPR5 921 aa10.24□□□□□ -0.77
LINC01238-201ENST00000416204 SMG1Q96Q15 3661 aaKnown RBP10.23□□□□□ -0.77
LINC01238-201ENST00000416204 PDCD11Q14690 1871 aaKnown RBP10.23□□□□□ -0.77
LINC01238-201ENST00000416204 PKD1L2Q7Z442 2459 aa10.23□□□□□ -0.77
LINC01238-201ENST00000416204 OTOL1A6NHN0 477 aaPredicted RBP10.23□□□□□ -0.77
LINC01238-201ENST00000416204 SRRM3A6NNA2 597 aaPredicted RBP10.23□□□□□ -0.77
LINC01238-201ENST00000416204 BTBD18B2RXH4 712 aa10.23□□□□□ -0.77
LINC01238-201ENST00000416204 RNF40O75150 1001 aa10.23□□□□□ -0.77
LINC01238-201ENST00000416204 CTDNEP1O95476 244 aa10.23□□□□□ -0.77
LINC01238-201ENST00000416204 EGFP01133 1207 aa10.23□□□□□ -0.77
LINC01238-201ENST00000416204 XBP1P17861 261 aa10.23□□□□□ -0.77
LINC01238-201ENST00000416204 CYP11B2P19099 503 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms