RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 GCNT1Q02742 428 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 DCAF4L1Q3SXM0 396 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 SPDYCQ5MJ68 293 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 ZBTB33Q86T24 672 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 PCSK9Q8NBP7 692 aaKnown RBP12.37□□□□□ -0.43
RFFL-205ENST00000415395 SLAIN1Q8ND83 568 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 RAET1EQ8TD07 263 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 TAS1R2Q8TE23 839 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 IPO4Q8TEX9 1081 aaKnown RBP12.37□□□□□ -0.43
RFFL-205ENST00000415395 CASKIN2Q8WXE0 1202 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 ZNF516Q92618 1163 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 MS4A14Q96JA4 679 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 NAP1L3Q99457 506 aaPredicted RBP12.37□□□□□ -0.43
RFFL-205ENST00000415395 ADPGKQ9BRR6 497 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 PDZD7Q9H5P4 517 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 UBE2TQ9NPD8 197 aaPredicted RBP12.37□□□□□ -0.43
RFFL-205ENST00000415395 TOPORSQ9NS56 1045 aaPredicted RBP12.37□□□□□ -0.43
RFFL-205ENST00000415395 GTF2IRD1Q9UHL9 959 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 TMEM59LQ9UK28 342 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 AJAP1Q9UKB5 411 aaPredicted RBP12.37□□□□□ -0.43
RFFL-205ENST00000415395 FRMPD3Q5JV73 1810 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 CITO14578 2027 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 A0A087X0T9 212 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 H0YHG0 523 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 KCNK3O14649 394 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 MEFVO15553 781 aaPredicted RBP12.37□□□□□ -0.43
RFFL-205ENST00000415395 CABYRO75952 493 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 CLTAP09496 248 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 FAM228BP0C875 321 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 HARSP12081 509 aaKnown RBP12.37□□□□□ -0.43
RFFL-205ENST00000415395 DARSP14868 501 aaKnown RBP12.37□□□□□ -0.43
RFFL-205ENST00000415395 ARF4P18085 180 aaPredicted RBP12.37□□□□□ -0.43
RFFL-205ENST00000415395 LSP1P33241 339 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 TRIM32Q13049 653 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 PDCLQ13371 301 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 WDR44Q5JSH3 913 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 ZBTB41Q5SVQ8 909 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 TDRD10Q5VZ19 366 aaKnown RBP12.37□□□□□ -0.43
RFFL-205ENST00000415395 EEF1DP3Q658K8 133 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 GJB7Q6PEY0 223 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 SEMA4DQ92854 862 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 ZNF668Q96K58 619 aaPredicted RBP12.37□□□□□ -0.43
RFFL-205ENST00000415395 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.37□□□□□ -0.432e-7■■■□□ 18.7
RFFL-205ENST00000415395 GPR88Q9GZN0 384 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 FAM49AQ9H0Q0 323 aaPredicted RBP12.37□□□□□ -0.43
RFFL-205ENST00000415395 RPF1Q9H9Y2 349 aaKnown RBP12.37□□□□□ -0.43
RFFL-205ENST00000415395 FAM114A2Q9NRY5 505 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 SMARCAL1Q9NZC9 954 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 EHD2Q9NZN4 543 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 DDX20Q9UHI6 824 aaKnown RBP12.37□□□□□ -0.43
RFFL-205ENST00000415395 ADAMTS1Q9UHI8 967 aa12.37□□□□□ -0.43
RFFL-205ENST00000415395 TULP1O00294 542 aaPredicted RBP12.36□□□□□ -0.43
RFFL-205ENST00000415395 TREHO43280 583 aa12.36□□□□□ -0.43
RFFL-205ENST00000415395 EVI5O60447 810 aa12.36□□□□□ -0.43
RFFL-205ENST00000415395 PGK1P00558 417 aa12.36□□□□□ -0.43
RFFL-205ENST00000415395 HLA-DRAP01903 254 aa12.36□□□□□ -0.43
RFFL-205ENST00000415395 H2AFZP0C0S5 128 aa12.36□□□□□ -0.43
RFFL-205ENST00000415395 ELNP15502 786 aa12.36□□□□□ -0.43
RFFL-205ENST00000415395 CCND3P30281 292 aaPredicted RBP12.36□□□□□ -0.43
RFFL-205ENST00000415395 MDH1P40925 334 aaKnown RBP12.36□□□□□ -0.43
RFFL-205ENST00000415395 TNFSF9P41273 254 aa12.36□□□□□ -0.43
RFFL-205ENST00000415395 CRYBB1P53674 252 aaPredicted RBP12.36□□□□□ -0.43
RFFL-205ENST00000415395 PTGISQ16647 500 aa12.36□□□□□ -0.43
RFFL-205ENST00000415395 DUOXA2Q1HG44 320 aa12.36□□□□□ -0.43
RFFL-205ENST00000415395 KIZQ2M2Z5 673 aa12.36□□□□□ -0.43
RFFL-205ENST00000415395 CEP85LQ5SZL2 805 aa12.36□□□□□ -0.43
RFFL-205ENST00000415395 AGBL2Q5U5Z8 902 aa12.36□□□□□ -0.43
RFFL-205ENST00000415395 CCSAPQ6IQ19 270 aaPredicted RBP12.36□□□□□ -0.43
RFFL-205ENST00000415395 H2AFVQ71UI9 128 aa12.36□□□□□ -0.43
RFFL-205ENST00000415395 PEX26Q7Z412 305 aa12.36□□□□□ -0.43
RFFL-205ENST00000415395 RPAINQ86UA6 219 aa12.36□□□□□ -0.43
RFFL-205ENST00000415395 ARHGEF19Q8IW93 802 aa12.36□□□□□ -0.43
RFFL-205ENST00000415395 HELQQ8TDG4 1101 aa12.36□□□□□ -0.43
RFFL-205ENST00000415395 DNAJB3Q8WWF6 145 aa12.36□□□□□ -0.43
RFFL-205ENST00000415395 SHC3Q92529 594 aa12.36□□□□□ -0.43
RFFL-205ENST00000415395 ASB7Q9H672 318 aa12.36□□□□□ -0.43
RFFL-205ENST00000415395 YY1AP1Q9H869 796 aa12.36□□□□□ -0.43
RFFL-205ENST00000415395 TMBIM4Q9HC24 238 aa12.36□□□□□ -0.43
RFFL-205ENST00000415395 C1orf112Q9NSG2 853 aa12.36□□□□□ -0.43
RFFL-205ENST00000415395 PLAAQ9Y263 795 aa12.36□□□□□ -0.43
RFFL-205ENST00000415395 VGLL3A8MV65 326 aa12.35□□□□□ -0.43
RFFL-205ENST00000415395 RAD51CO43502 376 aa12.35□□□□□ -0.43
RFFL-205ENST00000415395 CEP104O60308 925 aa12.35□□□□□ -0.43
RFFL-205ENST00000415395 FSBPO95073 299 aa12.35□□□□□ -0.43
RFFL-205ENST00000415395 FAM107AO95990 144 aa12.35□□□□□ -0.43
RFFL-205ENST00000415395 EIF4BP23588 611 aaKnown RBP12.35□□□□□ -0.43
RFFL-205ENST00000415395 PIK3CAP42336 1068 aa12.35□□□□□ -0.43
RFFL-205ENST00000415395 LIG3P49916 1009 aa12.35□□□□□ -0.43
RFFL-205ENST00000415395 GUCY2FP51841 1108 aa12.35□□□□□ -0.43
RFFL-205ENST00000415395 EIF3BP55884 814 aaKnown RBP12.35□□□□□ -0.43
RFFL-205ENST00000415395 WNT7BP56706 349 aa12.35□□□□□ -0.43
RFFL-205ENST00000415395 ARID5AQ03989 594 aa12.35□□□□□ -0.43
RFFL-205ENST00000415395 PTK2Q05397 1052 aa12.35□□□□□ -0.43
RFFL-205ENST00000415395 HIC1Q14526 733 aa12.35□□□□□ -0.43
RFFL-205ENST00000415395 ENOX2Q16206 610 aaKnown RBP12.35□□□□□ -0.43
RFFL-205ENST00000415395 NBPF20Q3BBV1 942 aa12.35□□□□□ -0.43
RFFL-205ENST00000415395 ALKBH5Q6P6C2 394 aaKnown RBP12.35□□□□□ -0.43
RFFL-205ENST00000415395 NOTUMQ6P988 496 aa12.35□□□□□ -0.43
RFFL-205ENST00000415395 CROCCP2Q86T23 111 aa12.35□□□□□ -0.43
RFFL-205ENST00000415395 RNF180Q86T96 592 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms