RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 MAPRE1Q15691 268 aaKnown RBP6.91□□□□□ -1.3
USP54-202ENST00000413442 NFE2Q16621 373 aaPredicted RBP6.91□□□□□ -1.3
USP54-202ENST00000413442 CTXN3Q4LDR2 81 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 COBLL1Q53SF7 1204 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 GLRA4Q5JXX5 417 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 TMEM31Q5JXX7 168 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 VARS2Q5ST30 1063 aaKnown RBP6.91□□□□□ -1.3
USP54-202ENST00000413442 C9orf57Q5W0N0 161 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 JADE1Q6IE81 842 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 IQCEQ6IPM2 695 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 LLGL2Q6P1M3 1020 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 SLC39A4Q6P5W5 647 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 FOXR2Q6PJQ5 311 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 KRBA2Q6ZNG9 492 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 PALB2Q86YC2 1186 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 WDR49Q8IV35 697 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 DCP1BQ8IZD4 617 aaKnown RBP6.91□□□□□ -1.3
USP54-202ENST00000413442 TDRD5Q8NAT2 981 aaKnown RBP6.91□□□□□ -1.3
USP54-202ENST00000413442 SPRYD3Q8NCJ5 442 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 SMG7Q92540 1137 aaKnown RBP6.91□□□□□ -1.3
USP54-202ENST00000413442 PAGE5Q96GU1 130 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 ZNF512Q96ME7 567 aaPredicted RBP6.91□□□□□ -1.3
USP54-202ENST00000413442 FNBP1Q96RU3 617 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 ACBD6Q9BR61 282 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 PAAF1Q9BRP4 392 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 FAM213AQ9BRX8 229 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 MAN1C1Q9NR34 630 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 EXOC1Q9NV70 894 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 RBAKQ9NYW8 714 aaPredicted RBP6.91□□□□□ -1.3
USP54-202ENST00000413442 GDE1Q9NZC3 331 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 EHD2Q9NZN4 543 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 EPS15L1Q9UBC2 864 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 SERTAD1Q9UHV2 236 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 SORCS3Q9UPU3 1222 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 TRAF3IP3Q9Y228 551 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 USP20Q9Y2K6 914 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 CLUHO75153 1309 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 PRUNE2Q8WUY3 3088 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 BRWD1Q9NSI6 2320 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 VWA8A3KMH1 1905 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 A0A1B0GVL5 298 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 ACTN4O43707 911 aaKnown RBP6.9□□□□□ -1.3
USP54-202ENST00000413442 CALUO43852 315 aaPredicted RBP6.9□□□□□ -1.3
USP54-202ENST00000413442 HUS1O60921 280 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 PRPF6O94906 941 aaKnown RBP6.9□□□□□ -1.3
USP54-202ENST00000413442 LRG1P02750 347 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 RPN1P04843 607 aaKnown RBP6.9□□□□□ -1.3
USP54-202ENST00000413442 TMEM191BP0C7N4 346 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 HARSP12081 509 aaKnown RBP6.9□□□□□ -1.3
USP54-202ENST00000413442 TKTP29401 623 aaKnown RBP6.9□□□□□ -1.3
USP54-202ENST00000413442 WEE1P30291 646 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 CLDN10P78369 228 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 FAM160A1Q05DH4 1040 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 SIGLEC14Q08ET2 396 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 MTMR3Q13615 1198 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 PKP1Q13835 747 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 PSMD6Q15008 389 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 PTPN21Q16825 1174 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 RARS2Q5T160 578 aaKnown RBP6.9□□□□□ -1.3
USP54-202ENST00000413442 CYP4A22Q5TCH4 519 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 OVOS1Q6IE37 1185 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 TMC5Q6UXY8 1006 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 MTSS1LQ765P7 747 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 ITIH5Q86UX2 942 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 GUF1Q8N442 669 aaKnown RBP6.9□□□□□ -1.3
USP54-202ENST00000413442 TTC39CQ8N584 583 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 TOP6BLQ8N6T0 577 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 SPPL2BQ8TCT7 592 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 TMC2Q8TDI7 906 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 SCFD1Q8WVM8 642 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 AUTS2Q8WXX7 1259 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 TAF4BQ92750 862 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 FAM212AQ96EL1 285 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 RPGRIP1Q96KN7 1286 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 SENP8Q96LD8 212 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 POMKQ9H5K3 350 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 AGPAT3Q9NRZ7 376 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 INTS13Q9NVM9 706 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 DMAC2Q9NW81 257 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 HSPBP1Q9NZL4 362 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 FBXL5Q9UKA1 691 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 FRMD4BQ9Y2L6 1034 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 PCDHGC5Q9Y5F6 944 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 CDY1Q9Y6F8 540 aa6.9□□□□□ -1.3
USP54-202ENST00000413442 NCOR1O75376 2440 aa6.9□□□□□ -1.31
USP54-202ENST00000413442 PLXNA3P51805 1871 aa6.9□□□□□ -1.31
USP54-202ENST00000413442 DENND4AQ7Z401 1863 aa6.9□□□□□ -1.31
USP54-202ENST00000413442 MYO10Q9HD67 2058 aa6.89□□□□□ -1.31
USP54-202ENST00000413442 CDH23Q9H251 3354 aa6.89□□□□□ -1.31
USP54-202ENST00000413442 PRRG1O14668 218 aa6.89□□□□□ -1.31
USP54-202ENST00000413442 TGFB1I1O43294 461 aa6.89□□□□□ -1.31
USP54-202ENST00000413442 KLRC4O43908 158 aa6.89□□□□□ -1.31
USP54-202ENST00000413442 STX10O60499 249 aa6.89□□□□□ -1.31
USP54-202ENST00000413442 EXOC3O60645 756 aa6.89□□□□□ -1.31
USP54-202ENST00000413442 C8AP07357 584 aa6.89□□□□□ -1.31
USP54-202ENST00000413442 MYBP10242 640 aa6.89□□□□□ -1.31
USP54-202ENST00000413442 LAMP2P13473 410 aa6.89□□□□□ -1.31
USP54-202ENST00000413442 P4HA1P13674 534 aa6.89□□□□□ -1.31
USP54-202ENST00000413442 TNNI1P19237 187 aa6.89□□□□□ -1.31
USP54-202ENST00000413442 PCSK1P29120 753 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms