RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 SLX4Q8IY92 1834 aa18.67■□□□□ 0.58
SDCBP-202ENST00000413219 ATP6V1C1P21283 382 aa18.67■□□□□ 0.58
SDCBP-202ENST00000413219 ECE1P42892 770 aa18.67■□□□□ 0.58
SDCBP-202ENST00000413219 HSD17B4P51659 736 aa18.67■□□□□ 0.58
SDCBP-202ENST00000413219 RAD23BP54727 409 aa18.67■□□□□ 0.58
SDCBP-202ENST00000413219 DACT2Q5SW24 774 aa18.67■□□□□ 0.58
SDCBP-202ENST00000413219 PCNX4Q63HM2 1172 aa18.67■□□□□ 0.58
SDCBP-202ENST00000413219 TRIM72Q6ZMU5 477 aa18.67■□□□□ 0.58
SDCBP-202ENST00000413219 LONP2Q86WA8 852 aa18.67■□□□□ 0.58
SDCBP-202ENST00000413219 C4orf19Q8IY42 314 aa18.67■□□□□ 0.58
SDCBP-202ENST00000413219 TOPORSQ9NS56 1045 aaPredicted RBP18.67■□□□□ 0.58
SDCBP-202ENST00000413219 HERC5Q9UII4 1024 aaKnown RBP18.67■□□□□ 0.58
SDCBP-202ENST00000413219 C2CD2LO14523 706 aa18.66■□□□□ 0.58
SDCBP-202ENST00000413219 RXRBP28702 533 aa18.66■□□□□ 0.58
SDCBP-202ENST00000413219 PKN2Q16513 984 aaKnown RBP18.66■□□□□ 0.58
SDCBP-202ENST00000413219 PPP1R2P3Q6NXS1 205 aa18.66■□□□□ 0.58
SDCBP-202ENST00000413219 PRUNE1Q86TP1 453 aa18.66■□□□□ 0.58
SDCBP-202ENST00000413219 LMNTD2Q8IXW0 634 aa18.66■□□□□ 0.58
SDCBP-202ENST00000413219 ASAP3Q8TDY4 903 aa18.66■□□□□ 0.58
SDCBP-202ENST00000413219 CPA5Q8WXQ8 436 aa18.66■□□□□ 0.58
SDCBP-202ENST00000413219 NUDCD1Q96RS6 583 aa18.66■□□□□ 0.58
SDCBP-202ENST00000413219 OSBPL1AQ9BXW6 950 aa18.66■□□□□ 0.58
SDCBP-202ENST00000413219 TMX4Q9H1E5 349 aaPredicted RBP18.66■□□□□ 0.58
SDCBP-202ENST00000413219 AGO4Q9HCK5 861 aaKnown RBP18.66■□□□□ 0.58
SDCBP-202ENST00000413219 SLCO1B3Q9NPD5 702 aa18.66■□□□□ 0.58
SDCBP-202ENST00000413219 C1orf112Q9NSG2 853 aa18.66■□□□□ 0.58
SDCBP-202ENST00000413219 LIASO43766 372 aa18.65■□□□□ 0.58
SDCBP-202ENST00000413219 TYROBPO43914 113 aa18.65■□□□□ 0.58
SDCBP-202ENST00000413219 KRT15P19012 456 aa18.65■□□□□ 0.58
SDCBP-202ENST00000413219 PTPN4P29074 926 aa18.65■□□□□ 0.58
SDCBP-202ENST00000413219 ALDH1B1P30837 517 aa18.65■□□□□ 0.58
SDCBP-202ENST00000413219 TAS2R40P59535 323 aa18.65■□□□□ 0.58
SDCBP-202ENST00000413219 MORF4L2Q15014 288 aa18.65■□□□□ 0.58
SDCBP-202ENST00000413219 FAM182BQ5T319 152 aa18.65■□□□□ 0.58
SDCBP-202ENST00000413219 HHATQ5VTY9 493 aa18.65■□□□□ 0.58
SDCBP-202ENST00000413219 NAIF1Q69YI7 327 aaPredicted RBP18.65■□□□□ 0.58
SDCBP-202ENST00000413219 LDHDQ86WU2 507 aa18.65■□□□□ 0.58
SDCBP-202ENST00000413219 SPOCK2Q92563 424 aa18.65■□□□□ 0.58
SDCBP-202ENST00000413219 NGLY1Q96IV0 654 aa18.65■□□□□ 0.58
SDCBP-202ENST00000413219 DBNDD1Q9H9R9 158 aa18.65■□□□□ 0.58
SDCBP-202ENST00000413219 ANKEF1Q9NU02 776 aa18.65■□□□□ 0.58
SDCBP-202ENST00000413219 FETUBQ9UGM5 382 aa18.65■□□□□ 0.58
SDCBP-202ENST00000413219 GRID1Q9ULK0 1009 aa18.65■□□□□ 0.58
SDCBP-202ENST00000413219 SCINQ9Y6U3 715 aa18.65■□□□□ 0.58
SDCBP-202ENST00000413219 ALOX15BO15296 676 aa18.65■□□□□ 0.58
SDCBP-202ENST00000413219 ZBED4O75132 1171 aa18.65■□□□□ 0.58
SDCBP-202ENST00000413219 GM2AP17900 193 aa18.65■□□□□ 0.58
SDCBP-202ENST00000413219 CA4P22748 312 aa18.65■□□□□ 0.58
SDCBP-202ENST00000413219 RPA3P35244 121 aaPredicted RBP18.65■□□□□ 0.58
SDCBP-202ENST00000413219 MRPS35P82673 323 aaKnown RBP18.65■□□□□ 0.58
SDCBP-202ENST00000413219 RNASELQ05823 741 aaKnown RBP18.65■□□□□ 0.58
SDCBP-202ENST00000413219 EAPPQ56P03 285 aaPredicted RBP18.65■□□□□ 0.58
SDCBP-202ENST00000413219 ZC3H12AQ5D1E8 599 aaKnown RBP18.65■□□□□ 0.58
SDCBP-202ENST00000413219 ACER1Q8TDN7 264 aa18.65■□□□□ 0.58
SDCBP-202ENST00000413219 GPRC5CQ9NQ84 441 aa18.65■□□□□ 0.58
SDCBP-202ENST00000413219 TBC1D22BQ9NU19 505 aa18.65■□□□□ 0.58
SDCBP-202ENST00000413219 UBIAD1Q9Y5Z9 338 aa18.65■□□□□ 0.58
SDCBP-202ENST00000413219 ANKRD31Q8N7Z5 1873 aa18.64■□□□□ 0.58
SDCBP-202ENST00000413219 ASTN2O75129 1339 aaPredicted RBP18.64■□□□□ 0.57
SDCBP-202ENST00000413219 POC1B-GALNT4F8VUJ3 575 aa18.64■□□□□ 0.57
SDCBP-202ENST00000413219 ZWINTO95229 277 aa18.64■□□□□ 0.57
SDCBP-202ENST00000413219 ACADSP16219 412 aa18.64■□□□□ 0.57
SDCBP-202ENST00000413219 CDC25CP30307 473 aa18.64■□□□□ 0.57
SDCBP-202ENST00000413219 NFX1Q12986 1120 aaKnown RBP18.64■□□□□ 0.57
SDCBP-202ENST00000413219 TKFCQ3LXA3 575 aa18.64■□□□□ 0.57
SDCBP-202ENST00000413219 FYB2Q5VWT5 728 aa18.64■□□□□ 0.57
SDCBP-202ENST00000413219 PLEKHA7Q6IQ23 1121 aa18.64■□□□□ 0.57
SDCBP-202ENST00000413219 C15orf39Q6ZRI6 1047 aa18.64■□□□□ 0.57
SDCBP-202ENST00000413219 CCDC125Q86Z20 511 aa18.64■□□□□ 0.57
SDCBP-202ENST00000413219 RCOR2Q8IZ40 523 aa18.64■□□□□ 0.57
SDCBP-202ENST00000413219 ZNF483Q8TF39 744 aaPredicted RBP18.64■□□□□ 0.57
SDCBP-202ENST00000413219 SPIRE2Q8WWL2 714 aa18.64■□□□□ 0.57
SDCBP-202ENST00000413219 RBM41Q96IZ5 413 aaKnown RBP18.64■□□□□ 0.57
SDCBP-202ENST00000413219 CSRNP1Q96S65 589 aa18.64■□□□□ 0.57
SDCBP-202ENST00000413219 FAM167BQ9BTA0 163 aa18.64■□□□□ 0.57
SDCBP-202ENST00000413219 DCLRE1BQ9H816 532 aa18.64■□□□□ 0.57
SDCBP-202ENST00000413219 PKD2L1Q9P0L9 805 aa18.64■□□□□ 0.57
SDCBP-202ENST00000413219 PSMC3IPQ9P2W1 217 aaPredicted RBP18.64■□□□□ 0.57
SDCBP-202ENST00000413219 DRG1Q9Y295 367 aaKnown RBP18.64■□□□□ 0.57
SDCBP-202ENST00000413219 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.64■□□□□ 0.57
SDCBP-202ENST00000413219 RGPD3A6NKT7 1758 aaPredicted RBP18.64■□□□□ 0.57
SDCBP-202ENST00000413219 RGPD4Q7Z3J3 1758 aa18.64■□□□□ 0.57
SDCBP-202ENST00000413219 LINGO3P0C6S8 592 aa18.64■□□□□ 0.57
SDCBP-202ENST00000413219 NPTX2P47972 431 aa18.64■□□□□ 0.57
SDCBP-202ENST00000413219 SLC1A5Q15758 541 aa18.64■□□□□ 0.57
SDCBP-202ENST00000413219 TSNAXIP1Q2TAA8 658 aa18.64■□□□□ 0.57
SDCBP-202ENST00000413219 FAM102BQ5T8I3 360 aa18.64■□□□□ 0.57
SDCBP-202ENST00000413219 EP400NLQ6ZTU2 488 aa18.64■□□□□ 0.57
SDCBP-202ENST00000413219 DHX37Q8IY37 1157 aaKnown RBP18.64■□□□□ 0.57
SDCBP-202ENST00000413219 ALLCQ8N6M5 410 aa18.64■□□□□ 0.57
SDCBP-202ENST00000413219 ZNF75CPQ92670 426 aaPredicted RBP18.64■□□□□ 0.57
SDCBP-202ENST00000413219 FAM118BQ9BPY3 351 aa18.64■□□□□ 0.57
SDCBP-202ENST00000413219 TUBB6Q9BUF5 446 aa18.64■□□□□ 0.57
SDCBP-202ENST00000413219 PHACTR1Q9C0D0 580 aa18.64■□□□□ 0.57
SDCBP-202ENST00000413219 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.64■□□□□ 0.57
SDCBP-202ENST00000413219 SPATS2LQ9NUQ6 558 aaKnown RBP18.64■□□□□ 0.57
SDCBP-202ENST00000413219 SHOC2Q9UQ13 582 aa18.64■□□□□ 0.57
SDCBP-202ENST00000413219 ATP2A1O14983 1001 aa18.63■□□□□ 0.57
SDCBP-202ENST00000413219 PECAM1P16284 738 aaPredicted RBP18.63■□□□□ 0.57
SDCBP-202ENST00000413219 MARK3P27448 753 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms