RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 KIF20AO95235 890 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 CST3P01034 146 aaPredicted RBP8.33□□□□□ -1.08
CPSF4-202ENST00000412686 SPATA31D3P0C874 917 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 TRIM49P0CI25 452 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 TRIM49CP0CI26 452 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 TNNI1P19237 187 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 CCNE1P24864 410 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 KLRC2P26717 231 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 AARSP49588 968 aaKnown RBP eCLIP8.33□□□□□ -1.083e-6■■■■■ 61.8
CPSF4-202ENST00000412686 CDR1P51861 262 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 LILRA4P59901 499 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 ELAVL2Q12926 359 aaKnown RBP8.33□□□□□ -1.08
CPSF4-202ENST00000412686 ADAM9Q13443 819 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 NFIL3Q16649 462 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 DPCR1Q3MIW9 517 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 COBLL1Q53SF7 1204 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 VARS2Q5ST30 1063 aaKnown RBP8.33□□□□□ -1.08
CPSF4-202ENST00000412686 C1orf220Q5T0J3 134 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 DSTYKQ6XUX3 929 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 SPATA31D4Q6ZUB0 917 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 PALB2Q86YC2 1186 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 WDR49Q8IV35 697 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.33□□□□□ -1.08
CPSF4-202ENST00000412686 CSGALNACT2Q8N6G5 542 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 C12orf76Q8N812 135 aaPredicted RBP8.33□□□□□ -1.08
CPSF4-202ENST00000412686 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.33□□□□□ -1.08
CPSF4-202ENST00000412686 PARD3BQ8TEW8 1205 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 SLC22A17Q8WUG5 538 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 NELFBQ8WX92 580 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 PIK3R5Q8WYR1 880 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 HLA-CQ95604 372 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 PPP2R3CQ969Q6 453 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 SUSD3Q96L08 255 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 FNBP1Q96RU3 617 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 TSPAN18Q96SJ8 248 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 DUSP9Q99956 384 aaKnown RBP8.33□□□□□ -1.08
CPSF4-202ENST00000412686 CLSTN3Q9BQT9 956 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 MMRN2Q9H8L6 949 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 RXFP1Q9HBX9 757 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 KIAA1586Q9HCI6 787 aa8.33□□□□□ -1.08
CPSF4-202ENST00000412686 TCF20Q9UGU0 1960 aaKnown RBP8.32□□□□□ -1.08
CPSF4-202ENST00000412686 M0QZQ0 153 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 PSMA7O14818 248 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 HCRTO43612 131 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 TRAPPC3O43617 180 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 LRRN2O75325 713 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 TNNC2P02585 160 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 WEE2P0C1S8 567 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 OR4Q2P0C623 313 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 IL9P15248 144 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 TAF6P49848 677 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 CLCN4P51793 760 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 ARPP19P56211 112 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 BFSP1Q12934 665 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 MYBPC2Q14324 1141 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 BMS1Q14692 1282 aaKnown RBP8.32□□□□□ -1.08
CPSF4-202ENST00000412686 SURF1Q15526 300 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 DUOXA2Q1HG44 320 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 EDRF1Q3B7T1 1238 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 TDRD10Q5VZ19 366 aaKnown RBP8.32□□□□□ -1.08
CPSF4-202ENST00000412686 TTI2Q6NXR4 508 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 SYCE2Q6PIF2 218 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 TRAPPC11Q7Z392 1133 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 NT5DC4Q86YG4 428 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 ZC3H3Q8IXZ2 948 aaKnown RBP8.32□□□□□ -1.08
CPSF4-202ENST00000412686 FAM186BQ8IYM0 893 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 TMEM174Q8WUU8 243 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 DHTKD1Q96HY7 919 aaPredicted RBP8.32□□□□□ -1.08
CPSF4-202ENST00000412686 ANKRD36BP1Q96IX9 119 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 MSLNLQ96KJ4 702 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 SENP8Q96LD8 212 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 MED15Q96RN5 788 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 TMEM209Q96SK2 561 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 CDCA3Q99618 268 aaPredicted RBP8.32□□□□□ -1.08
CPSF4-202ENST00000412686 EMILIN2Q9BXX0 1053 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 SCUBE2Q9NQ36 999 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.32□□□□□ -1.083e-7■■■■■ 76.5
CPSF4-202ENST00000412686 RYDENQ9NUL5 291 aaKnown RBP8.32□□□□□ -1.08
CPSF4-202ENST00000412686 TMEM63CQ9P1W3 806 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 MTRRQ9UBK8 725 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 FRMD4BQ9Y2L6 1034 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 CDY1Q9Y6F8 540 aa8.32□□□□□ -1.08
CPSF4-202ENST00000412686 EYSQ5T1H1 3165 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 REV3LO60673 3130 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 WDR27A2RRH5 827 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 GRXCR2A6NFK2 248 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 KPNA7A9QM74 516 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 CYB561D2O14569 222 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 SYN3O14994 580 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 CETN3O15182 167 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 TGM5O43548 720 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 TBC1D4O60343 1298 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 VNN1O95497 513 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 GLUD1P00367 558 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 C4BPAP04003 597 aaKnown RBP8.31□□□□□ -1.08
CPSF4-202ENST00000412686 ADH1AP07327 375 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 RPL13P26373 211 aaKnown RBP8.31□□□□□ -1.08
CPSF4-202ENST00000412686 OR1D2P34982 312 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 PSMC2P35998 433 aaKnown RBP8.31□□□□□ -1.08
CPSF4-202ENST00000412686 VAMP7P51809 220 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms