RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 R3HCC1Q9Y3T6 440 aaKnown RBP5.99□□□□□ -1.45
LINC00342-201ENST00000412393 SLC12A7Q9Y666 1083 aa5.99□□□□□ -1.45
LINC00342-201ENST00000412393 LAMA3Q16787 3333 aa5.99□□□□□ -1.45
LINC00342-201ENST00000412393 PTPRSQ13332 1948 aa5.99□□□□□ -1.45
LINC00342-201ENST00000412393 WDR81Q562E7 1941 aa5.99□□□□□ -1.45
LINC00342-201ENST00000412393 LOXHD1Q8IVV2 1947 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 UPK3BL1B0FP48 263 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 UPK3BL2E5RIL1 263 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 CTIFO43310 598 aaKnown RBP5.98□□□□□ -1.45
LINC00342-201ENST00000412393 SORBS3O60504 671 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 BRD1O95696 1058 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 GGPS1O95749 300 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 TGFB3P10600 412 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 EIF4BP23588 611 aaKnown RBP5.98□□□□□ -1.45
LINC00342-201ENST00000412393 ADAM17P78536 824 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 EXOSC10Q01780 885 aaKnown RBP5.98□□□□□ -1.45
LINC00342-201ENST00000412393 BFSP2Q13515 415 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 KRT32Q14532 448 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 PTGISQ16647 500 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 DGKDQ16760 1214 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 GNPTABQ3T906 1256 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 CELF3Q5SZQ8 465 aaKnown RBP5.98□□□□□ -1.45
LINC00342-201ENST00000412393 APOA5Q6Q788 366 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 USP17L6PQ6QN14 398 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 SGMS1Q86VZ5 419 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 MICU3Q86XE3 530 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 CREBRFQ8IUR6 639 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 TTC9BQ8N6N2 239 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 FANCBQ8NB91 859 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 SMARCC2Q8TAQ2 1214 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 GPT2Q8TD30 523 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 HERVK_113Q902F9 699 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 TCTN2Q96GX1 697 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 SCLYQ96I15 445 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 TCEANC2Q96MN5 208 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 SPATA33Q96N06 139 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 GUCD1Q96NT3 240 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 ARID3AQ99856 593 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 PLCD4Q9BRC7 762 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 ALG1Q9BT22 464 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 C1QTNF3Q9BXJ4 246 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 FOXP3Q9BZS1 431 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 MTIF3Q9H2K0 278 aaKnown RBP5.98□□□□□ -1.45
LINC00342-201ENST00000412393 MLXIPQ9HAP2 919 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 TNFRSF12AQ9NP84 129 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 SMPD4Q9NXE4 827 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 USP25Q9UHP3 1055 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 MYH9P35579 1960 aaKnown RBP5.98□□□□□ -1.45
LINC00342-201ENST00000412393 FRMPD4Q14CM0 1322 aa5.98□□□□□ -1.45
LINC00342-201ENST00000412393 hCG_1642624A0A1W2PR95 340 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 FADS2P1A8MWK0 482 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 GRXCR1A8MXD5 290 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 MEIS2O14770 477 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 MATN3O15232 486 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 ZBTB43O43298 467 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 FIBPO43427 364 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 PPFIA4O75335 1185 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 STAM2O75886 525 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 REC8O95072 547 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 BPNT1O95861 308 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 F2P00734 622 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 PFKMP08237 780 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 HMGB1P09429 215 aaKnown RBP5.97□□□□□ -1.45
LINC00342-201ENST00000412393 ZNF286BP0CG31 522 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 SDHBP21912 280 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 UBA1P22314 1058 aaKnown RBP5.97□□□□□ -1.45
LINC00342-201ENST00000412393 ICAM3P32942 547 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 MAPKAPK2P49137 400 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 MRPS9P82933 396 aaKnown RBP5.97□□□□□ -1.45
LINC00342-201ENST00000412393 SP2Q02086 613 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 KRTAP1-1Q07627 177 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 KIAA0753Q2KHM9 967 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 ADCK5Q3MIX3 580 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 HSDL1Q3SXM5 330 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 TMTC3Q6ZXV5 915 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 OTOP2Q7RTS6 562 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 DEFB128Q7Z7B8 93 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 SESTD1Q86VW0 696 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 C7orf31Q8N865 590 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 SLC17A8Q8NDX2 589 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 PPTC7Q8NI37 304 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 IPO4Q8TEX9 1081 aaKnown RBP5.97□□□□□ -1.45
LINC00342-201ENST00000412393 ANKRD7Q92527 254 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 KAT2BQ92831 832 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 INPP4AQ96PE3 977 aaPredicted RBP5.97□□□□□ -1.45
LINC00342-201ENST00000412393 CDX2Q99626 313 aaPredicted RBP5.97□□□□□ -1.45
LINC00342-201ENST00000412393 KATNAL1Q9BW62 490 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 TTYH1Q9H313 450 aaPredicted RBP5.97□□□□□ -1.45
LINC00342-201ENST00000412393 PSTPIP2Q9H939 334 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 RBM28Q9NW13 759 aaKnown RBP5.97□□□□□ -1.45
LINC00342-201ENST00000412393 HDAC6Q9UBN7 1215 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 NAP1L2Q9ULW6 460 aaPredicted RBP5.97□□□□□ -1.45
LINC00342-201ENST00000412393 MICAL3Q7RTP6 2002 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 EVPLQ92817 2033 aa5.97□□□□□ -1.45
LINC00342-201ENST00000412393 KLF18A0A0U1RQI7 1052 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 GOLGA8AA7E2F4 631 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 GOLGA8BA8MQT2 603 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 HAS3O00219 553 aa5.96□□□□□ -1.46
LINC00342-201ENST00000412393 NOP56O00567 594 aaKnown RBP5.96□□□□□ -1.46
LINC00342-201ENST00000412393 ITGB3P05106 788 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms