RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 PTPN12Q05209 780 aaKnown RBP7.72□□□□□ -1.17
PTPN3-203ENST00000412145 SCRN1Q12765 414 aa7.72□□□□□ -1.17
PTPN3-203ENST00000412145 TRMT5Q32P41 509 aaKnown RBP7.72□□□□□ -1.17
PTPN3-203ENST00000412145 C7orf31Q8N865 590 aa7.72□□□□□ -1.17
PTPN3-203ENST00000412145 STKLD1Q8NE28 680 aa7.72□□□□□ -1.17
PTPN3-203ENST00000412145 SYN2Q92777 582 aaPredicted RBP7.72□□□□□ -1.17
PTPN3-203ENST00000412145 RSAD1Q9HA92 442 aa7.72□□□□□ -1.17
PTPN3-203ENST00000412145 C8orf4Q9NR00 106 aa7.72□□□□□ -1.17
PTPN3-203ENST00000412145 FEM1BQ9UK73 627 aa7.72□□□□□ -1.17
PTPN3-203ENST00000412145 SEC31AO94979 1220 aaKnown RBP7.72□□□□□ -1.17
PTPN3-203ENST00000412145 CYP4A11Q02928 519 aa7.72□□□□□ -1.17
PTPN3-203ENST00000412145 COX10Q12887 443 aa7.72□□□□□ -1.17
PTPN3-203ENST00000412145 DCTN2Q13561 401 aaKnown RBP7.72□□□□□ -1.17
PTPN3-203ENST00000412145 DPCR1Q3MIW9 517 aa7.72□□□□□ -1.17
PTPN3-203ENST00000412145 CYP4A22Q5TCH4 519 aa7.72□□□□□ -1.17
PTPN3-203ENST00000412145 IZUMO3Q5VZ72 239 aa7.72□□□□□ -1.17
PTPN3-203ENST00000412145 CCDC149Q6ZUS6 474 aa7.72□□□□□ -1.17
PTPN3-203ENST00000412145 OR6B3Q8NGW1 331 aa7.72□□□□□ -1.17
PTPN3-203ENST00000412145 MAGEB10Q96LZ2 347 aaPredicted RBP7.72□□□□□ -1.17
PTPN3-203ENST00000412145 MYL10Q9BUA6 226 aa7.72□□□□□ -1.17
PTPN3-203ENST00000412145 ANKARQ7Z5J8 1434 aa7.72□□□□□ -1.17
PTPN3-203ENST00000412145 AP1G2O75843 785 aa7.72□□□□□ -1.17
PTPN3-203ENST00000412145 ASNSP08243 561 aa7.72□□□□□ -1.17
PTPN3-203ENST00000412145 PPP2R1BP30154 601 aa7.72□□□□□ -1.17
PTPN3-203ENST00000412145 CNDP1Q96KN2 507 aa7.72□□□□□ -1.17
PTPN3-203ENST00000412145 SH2B2O14492 632 aaPredicted RBP7.71□□□□□ -1.17
PTPN3-203ENST00000412145 CD3EAPO15446 510 aaKnown RBP7.71□□□□□ -1.17
PTPN3-203ENST00000412145 IL18RAPO95256 599 aa7.71□□□□□ -1.17
PTPN3-203ENST00000412145 FKBP9O95302 570 aa7.71□□□□□ -1.17
PTPN3-203ENST00000412145 SNRPAP09012 282 aaKnown RBP7.71□□□□□ -1.17
PTPN3-203ENST00000412145 PCSK2P16519 638 aa7.71□□□□□ -1.17
PTPN3-203ENST00000412145 ZNF24P17028 368 aa7.71□□□□□ -1.17
PTPN3-203ENST00000412145 C6orf10Q5SRN2 563 aa7.71□□□□□ -1.17
PTPN3-203ENST00000412145 NAPEPLDQ6IQ20 393 aa7.71□□□□□ -1.17
PTPN3-203ENST00000412145 FKBP9P1Q75LS8 142 aa7.71□□□□□ -1.17
PTPN3-203ENST00000412145 G2E3Q7L622 706 aa7.71□□□□□ -1.17
PTPN3-203ENST00000412145 ATPAF2Q8N5M1 289 aa7.71□□□□□ -1.17
PTPN3-203ENST00000412145 OR6P1Q8NGX9 317 aa7.71□□□□□ -1.17
PTPN3-203ENST00000412145 PTPRN2Q92932 1015 aa7.71□□□□□ -1.17
PTPN3-203ENST00000412145 C17orf80Q9BSJ5 609 aa7.71□□□□□ -1.17
PTPN3-203ENST00000412145 DNAJC5Q9H3Z4 198 aa7.71□□□□□ -1.17
PTPN3-203ENST00000412145 AVENQ9NQS1 362 aaPredicted RBP7.71□□□□□ -1.17
PTPN3-203ENST00000412145 ZMYM2Q9UBW7 1377 aa7.71□□□□□ -1.17
PTPN3-203ENST00000412145 C15orf38-AP3S2A0A0A6YYH1 394 aa7.71□□□□□ -1.17
PTPN3-203ENST00000412145 GSAPA4D1B5 854 aa7.71□□□□□ -1.17
PTPN3-203ENST00000412145 THRAP10827 490 aa7.71□□□□□ -1.17
PTPN3-203ENST00000412145 GNA15P30679 374 aa7.71□□□□□ -1.17
PTPN3-203ENST00000412145 ZNF200P98182 395 aaPredicted RBP7.71□□□□□ -1.17
PTPN3-203ENST00000412145 CHRNB3Q05901 458 aa7.71□□□□□ -1.17
PTPN3-203ENST00000412145 KYNUQ16719 465 aa7.71□□□□□ -1.17
PTPN3-203ENST00000412145 ARMC4Q5T2S8 1044 aa7.71□□□□□ -1.17
PTPN3-203ENST00000412145 TAS2R42Q7RTR8 314 aa7.71□□□□□ -1.17
PTPN3-203ENST00000412145 CATSPER4Q7RTX7 472 aa7.71□□□□□ -1.17
PTPN3-203ENST00000412145 ARPINQ7Z6K5 226 aa7.71□□□□□ -1.17
PTPN3-203ENST00000412145 SUCLG2Q96I99 432 aa7.71□□□□□ -1.17
PTPN3-203ENST00000412145 SENP7Q9BQF6 1050 aa7.71□□□□□ -1.17
PTPN3-203ENST00000412145 OXCT2Q9BYC2 517 aaPredicted RBP7.71□□□□□ -1.17
PTPN3-203ENST00000412145 THRAP3Q9Y2W1 955 aaKnown RBP7.71□□□□□ -1.17
PTPN3-203ENST00000412145 PEG3Q9GZU2 1588 aa7.71□□□□□ -1.17
PTPN3-203ENST00000412145 CCDC189A1A4V9 331 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 PEX1O43933 1283 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 NDUFS3O75489 264 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 HOXC6P09630 235 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 HOXD10P28358 340 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 CDH24Q86UP0 819 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 GPT2Q8TD30 523 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 UBE2OQ9C0C9 1292 aaKnown RBP7.71□□□□□ -1.18
PTPN3-203ENST00000412145 FHDC1Q9C0D6 1143 aaPredicted RBP7.71□□□□□ -1.18
PTPN3-203ENST00000412145 CXorf56Q9H5V9 222 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 PRDM16Q9HAZ2 1276 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 TMCO1Q9UM00 188 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 MEI4A8MW99 385 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 PDE8BO95263 885 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 OGNP20774 298 aaKnown RBP7.71□□□□□ -1.18
PTPN3-203ENST00000412145 SPANXN2Q5MJ10 180 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 AADATQ8N5Z0 425 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 WDR60Q8WVS4 1066 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 KLHL28Q9NXS3 571 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 HOXC10Q9NYD6 342 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 LRRC53A6NM62 1247 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 PSMD12O00232 456 aaPredicted RBP7.71□□□□□ -1.18
PTPN3-203ENST00000412145 CYP2C8P10632 490 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 ETFBP38117 255 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 TRIP10Q15642 601 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 ARMC6Q6NXE6 501 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 ZNF438Q7Z4V0 828 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 TTC30AQ86WT1 665 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 TTC30BQ8N4P2 665 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 ZNF496Q96IT1 587 aaPredicted RBP7.71□□□□□ -1.18
PTPN3-203ENST00000412145 RACGAP1Q9H0H5 632 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 CYP39A1Q9NYL5 469 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 SNPHO15079 494 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 TIMM44O43615 452 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 ANXA9O76027 345 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 TPI1P60174 286 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 PTPRKQ15262 1439 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 DUOXA2Q1HG44 320 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 USPL1Q5W0Q7 1092 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 MZT2BQ6NZ67 158 aa7.71□□□□□ -1.18
PTPN3-203ENST00000412145 TMC5Q6UXY8 1006 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms