RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 TPGS2Q68CL5 300 aa17.96■□□□□ 0.47
SCAMP4-203ENST00000411971 SCARA3Q6AZY7 606 aa17.96■□□□□ 0.47
SCAMP4-203ENST00000411971 JADE1Q6IE81 842 aa17.96■□□□□ 0.47
SCAMP4-203ENST00000411971 ZNF280DQ6N043 979 aa17.96■□□□□ 0.47
SCAMP4-203ENST00000411971 KCTD17Q8N5Z5 321 aa17.96■□□□□ 0.47
SCAMP4-203ENST00000411971 MYCT1Q8N699 235 aa17.96■□□□□ 0.47
SCAMP4-203ENST00000411971 RSPRY1Q96DX4 576 aa17.96■□□□□ 0.47
SCAMP4-203ENST00000411971 BICD1Q96G01 975 aa17.96■□□□□ 0.47
SCAMP4-203ENST00000411971 AK8Q96MA6 479 aa17.96■□□□□ 0.47
SCAMP4-203ENST00000411971 PGLYRP2Q96PD5 576 aa17.96■□□□□ 0.47
SCAMP4-203ENST00000411971 LRRC3Q9BY71 257 aa17.96■□□□□ 0.47
SCAMP4-203ENST00000411971 PLEKHA5Q9HAU0 1116 aa17.96■□□□□ 0.47
SCAMP4-203ENST00000411971 HEBP1Q9NRV9 189 aa17.96■□□□□ 0.47
SCAMP4-203ENST00000411971 AFF4Q9UHB7 1163 aaKnown RBP17.96■□□□□ 0.47
SCAMP4-203ENST00000411971 CPSF3Q9UKF6 684 aaKnown RBP17.96■□□□□ 0.47
SCAMP4-203ENST00000411971 CLIC4Q9Y696 253 aa17.96■□□□□ 0.47
SCAMP4-203ENST00000411971 OGTO15294 1046 aa17.95■□□□□ 0.46
SCAMP4-203ENST00000411971 TRAK2O60296 914 aa17.95■□□□□ 0.46
SCAMP4-203ENST00000411971 SOAT2O75908 522 aa17.95■□□□□ 0.46
SCAMP4-203ENST00000411971 FAM13AO94988 1023 aa17.95■□□□□ 0.46
SCAMP4-203ENST00000411971 OAZ2O95190 189 aa17.95■□□□□ 0.46
SCAMP4-203ENST00000411971 NFICP08651 508 aa17.95■□□□□ 0.46
SCAMP4-203ENST00000411971 UBA7P41226 1012 aa17.95■□□□□ 0.46
SCAMP4-203ENST00000411971 LIG4P49917 911 aa17.95■□□□□ 0.46
SCAMP4-203ENST00000411971 WNT7BP56706 349 aa17.95■□□□□ 0.46
SCAMP4-203ENST00000411971 UBXN2BQ14CS0 331 aa17.95■□□□□ 0.46
SCAMP4-203ENST00000411971 ZNF687Q8N1G0 1237 aa17.95■□□□□ 0.46
SCAMP4-203ENST00000411971 ZSWIM2Q8NEG5 633 aa17.95■□□□□ 0.46
SCAMP4-203ENST00000411971 ASB16Q96NS5 453 aa17.95■□□□□ 0.46
SCAMP4-203ENST00000411971 LTB4R2Q9NPC1 389 aa17.95■□□□□ 0.46
SCAMP4-203ENST00000411971 GDE1Q9NZC3 331 aa17.95■□□□□ 0.46
SCAMP4-203ENST00000411971 UBQLN1Q9UMX0 589 aaKnown RBP17.95■□□□□ 0.46
SCAMP4-203ENST00000411971 YIPF1Q9Y548 306 aa17.95■□□□□ 0.46
SCAMP4-203ENST00000411971 DENND4CQ5VZ89 1909 aa17.95■□□□□ 0.46
SCAMP4-203ENST00000411971 FAM170BA6NMN3 283 aa17.94■□□□□ 0.46
SCAMP4-203ENST00000411971 HNRNPDLO14979 420 aaKnown RBP17.94■□□□□ 0.46
SCAMP4-203ENST00000411971 CPB1P15086 417 aa17.94■□□□□ 0.46
SCAMP4-203ENST00000411971 VIPR2P41587 438 aa17.94■□□□□ 0.46
SCAMP4-203ENST00000411971 EPHA5P54756 1037 aa17.94■□□□□ 0.46
SCAMP4-203ENST00000411971 GTF2BQ00403 316 aa17.94■□□□□ 0.46
SCAMP4-203ENST00000411971 PPP2R3AQ06190 1150 aa17.94■□□□□ 0.46
SCAMP4-203ENST00000411971 CUL4AQ13619 759 aa17.94■□□□□ 0.46
SCAMP4-203ENST00000411971 SPATA1Q5VX52 437 aa17.94■□□□□ 0.46
SCAMP4-203ENST00000411971 VITQ6UXI7 678 aa17.94■□□□□ 0.46
SCAMP4-203ENST00000411971 TPRG1Q6ZUI0 275 aa17.94■□□□□ 0.46
SCAMP4-203ENST00000411971 TMC8Q8IU68 726 aa17.94■□□□□ 0.46
SCAMP4-203ENST00000411971 GPIHBP1Q8IV16 184 aa17.94■□□□□ 0.46
SCAMP4-203ENST00000411971 MAP4K3Q8IVH8 894 aa17.94■□□□□ 0.46
SCAMP4-203ENST00000411971 APPL2Q8NEU8 664 aa17.94■□□□□ 0.46
SCAMP4-203ENST00000411971 SHKBP1Q8TBC3 707 aa17.94■□□□□ 0.46
SCAMP4-203ENST00000411971 ELSPBP1Q96BH3 223 aa17.94■□□□□ 0.46
SCAMP4-203ENST00000411971 FAM212AQ96EL1 285 aa17.94■□□□□ 0.46
SCAMP4-203ENST00000411971 FAM84AQ96KN4 292 aa17.94■□□□□ 0.46
SCAMP4-203ENST00000411971 PARVGQ9HBI0 331 aa17.94■□□□□ 0.46
SCAMP4-203ENST00000411971 SLC27A5Q9Y2P5 690 aa17.94■□□□□ 0.46
SCAMP4-203ENST00000411971 OBSL1O75147 1896 aa17.93■□□□□ 0.46
SCAMP4-203ENST00000411971 NUP210Q8TEM1 1887 aaPredicted RBP17.93■□□□□ 0.46
SCAMP4-203ENST00000411971 MYL4P12829 197 aa17.93■□□□□ 0.46
SCAMP4-203ENST00000411971 CYP3A5P20815 502 aa17.93■□□□□ 0.46
SCAMP4-203ENST00000411971 MARCKSP29966 332 aaPredicted RBP17.93■□□□□ 0.46
SCAMP4-203ENST00000411971 LONP1P36776 959 aaKnown RBP17.93■□□□□ 0.46
SCAMP4-203ENST00000411971 ACOT2P49753 483 aa17.93■□□□□ 0.46
SCAMP4-203ENST00000411971 PRKCQQ04759 706 aa17.93■□□□□ 0.46
SCAMP4-203ENST00000411971 YWHAHQ04917 246 aaPredicted RBP17.93■□□□□ 0.46
SCAMP4-203ENST00000411971 KCNA1Q09470 495 aa17.93■□□□□ 0.46
SCAMP4-203ENST00000411971 DUSP4Q13115 394 aa17.93■□□□□ 0.46
SCAMP4-203ENST00000411971 TEAD2Q15562 447 aa17.93■□□□□ 0.46
SCAMP4-203ENST00000411971 STXBP5Q5T5C0 1151 aa17.93■□□□□ 0.46
SCAMP4-203ENST00000411971 CRELD2Q6UXH1 353 aaPredicted RBP17.93■□□□□ 0.46
SCAMP4-203ENST00000411971 OR10T2Q8NGX3 314 aa17.93■□□□□ 0.46
SCAMP4-203ENST00000411971 LARP4BQ92615 738 aaKnown RBP17.93■□□□□ 0.46
SCAMP4-203ENST00000411971 CALML4Q96GE6 196 aa17.93■□□□□ 0.46
SCAMP4-203ENST00000411971 CLIC6Q96NY7 704 aa17.93■□□□□ 0.46
SCAMP4-203ENST00000411971 ZHX3Q9H4I2 956 aa17.93■□□□□ 0.46
SCAMP4-203ENST00000411971 RPF1Q9H9Y2 349 aaKnown RBP17.93■□□□□ 0.46
SCAMP4-203ENST00000411971 ZNF334Q9HCZ1 680 aaPredicted RBP17.93■□□□□ 0.46
SCAMP4-203ENST00000411971 FBXO2Q9UK22 296 aaPredicted RBP17.93■□□□□ 0.46
SCAMP4-203ENST00000411971 ANO9A1A5B4 782 aa17.92■□□□□ 0.46
SCAMP4-203ENST00000411971 SLC26A4O43511 780 aa17.92■□□□□ 0.46
SCAMP4-203ENST00000411971 CENPBP07199 599 aaPredicted RBP17.92■□□□□ 0.46
SCAMP4-203ENST00000411971 LILRA4P59901 499 aa17.92■□□□□ 0.46
SCAMP4-203ENST00000411971 RESTQ13127 1097 aa17.92■□□□□ 0.46
SCAMP4-203ENST00000411971 PDZD4Q76G19 769 aaPredicted RBP17.92■□□□□ 0.46
SCAMP4-203ENST00000411971 DYMQ7RTS9 669 aa17.92■□□□□ 0.46
SCAMP4-203ENST00000411971 BRAPQ7Z569 592 aa17.92■□□□□ 0.46
SCAMP4-203ENST00000411971 SFR1Q86XK3 245 aa17.92■□□□□ 0.46
SCAMP4-203ENST00000411971 DCLK2Q8N568 766 aa17.92■□□□□ 0.46
SCAMP4-203ENST00000411971 ATAD1Q8NBU5 361 aa17.92■□□□□ 0.46
SCAMP4-203ENST00000411971 SHDQ96IW2 340 aa17.92■□□□□ 0.46
SCAMP4-203ENST00000411971 SENP8Q96LD8 212 aa17.92■□□□□ 0.46
SCAMP4-203ENST00000411971 LRRC3BQ96PB8 259 aa17.92■□□□□ 0.46
SCAMP4-203ENST00000411971 MKNK1Q9BUB5 465 aa17.92■□□□□ 0.46
SCAMP4-203ENST00000411971 MSTO1Q9BUK6 570 aa17.92■□□□□ 0.46
SCAMP4-203ENST00000411971 FGFBP2Q9BYJ0 223 aa17.92■□□□□ 0.46
SCAMP4-203ENST00000411971 CCSER1Q9C0I3 900 aa17.92■□□□□ 0.46
SCAMP4-203ENST00000411971 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.92■□□□□ 0.46
SCAMP4-203ENST00000411971 A0A087X0B3 334 aa17.91■□□□□ 0.46
SCAMP4-203ENST00000411971 MTMR11A4FU01 709 aa17.91■□□□□ 0.46
SCAMP4-203ENST00000411971 VPS37CA5D8V6 355 aaPredicted RBP17.91■□□□□ 0.46
SCAMP4-203ENST00000411971 PIRO00625 290 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms