RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 ACADMP11310 421 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 CPA1P15085 419 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 CDK2P24941 298 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 CHRNA5P30532 468 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 PTGS2P35354 604 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 RPS7P62081 194 aaKnown RBP4.79□□□□□ -1.64
PTPN13-202ENST00000411767 NAB1Q13506 487 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 DYRK1AQ13627 763 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 ATL3Q6DD88 541 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 C16orf89Q6UX73 402 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 RBM43Q6ZSC3 357 aaKnown RBP4.79□□□□□ -1.64
PTPN13-202ENST00000411767 NUP54Q7Z3B4 507 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 PRR22Q8IZ63 422 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 ZBTB8BQ8NAP8 495 aaPredicted RBP4.79□□□□□ -1.64
PTPN13-202ENST00000411767 METTL6Q8TCB7 284 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 UBASH3BQ8TF42 649 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 CHAC2Q8WUX2 184 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 KAT2BQ92831 832 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 KCNB2Q92953 911 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 TMEM237Q96Q45 408 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 VCPKMTQ9H867 229 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 C19orf12Q9NSK7 152 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 LIN7CQ9NUP9 197 aaKnown RBP4.79□□□□□ -1.64
PTPN13-202ENST00000411767 C3orf18Q9UK00 162 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 MEMO1Q9Y316 297 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 CEP164Q9UPV0 1460 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 TEX51A0A1B0GUA7 166 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 E9PBE3 544 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 K7ERI5 159 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 KRIT1O00522 736 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 SSNA1O43805 119 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 SLC1A6P48664 564 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 TAP1Q03518 808 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 AAGABQ6PD74 315 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 KLHL35Q6PF15 583 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 PLCZ1Q86YW0 608 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 SCUBE3Q8IX30 993 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 LRRC17Q8N6Y2 441 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 DDX54Q8TDD1 881 aaKnown RBP4.79□□□□□ -1.64
PTPN13-202ENST00000411767 TCEAL4Q96EI5 215 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 FAM118BQ9BPY3 351 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 LBHD1Q9BQE6 289 aaPredicted RBP4.79□□□□□ -1.64
PTPN13-202ENST00000411767 SAE1Q9UBE0 346 aaPredicted RBP4.79□□□□□ -1.64
PTPN13-202ENST00000411767 NARFQ9UHQ1 456 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 NOB1Q9ULX3 412 aaKnown RBP4.79□□□□□ -1.64
PTPN13-202ENST00000411767 SHOC2Q9UQ13 582 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 POLR1DQ9Y2S0 133 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 FPGT-TNNI3KV9GXZ4 949 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 ALDH1A3P47895 512 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 CBX3Q13185 183 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 ITGA9Q13797 1035 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 ITIH4Q14624 930 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 SMU1Q2TAY7 513 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 GNPTABQ3T906 1256 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 SVOPQ8N4V2 548 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 RDH13Q8NBN7 331 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 SLC10A4Q96EP9 437 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 NSL1Q96IY1 281 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 MAGED4Q96JG8 741 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 PITPNM3Q9BZ71 974 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 WDR12Q9GZL7 423 aaKnown RBP4.79□□□□□ -1.64
PTPN13-202ENST00000411767 RABGEF1Q9UJ41 708 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 DOLKQ9UPQ8 538 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 RTL1A6NKG5 1358 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 GPRASP1Q5JY77 1395 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 NPIPA7E9PJI5 369 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 NPIPA8P0DM63 369 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 PRKAR2BP31323 418 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 CABP4P57796 275 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 GPS1Q13098 491 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 VEPH1Q14D04 833 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 KYNUQ16719 465 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 SYT10Q6XYQ8 523 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 TRMT1LQ7Z2T5 733 aaKnown RBP4.79□□□□□ -1.64
PTPN13-202ENST00000411767 GPR141Q7Z602 305 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 PHACTR4Q8IZ21 702 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 CHPFQ8IZ52 775 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 SRBD1Q8N5C6 995 aaKnown RBP4.79□□□□□ -1.64
PTPN13-202ENST00000411767 ZNF248Q8NDW4 579 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 PCDH19Q8TAB3 1148 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 ADAM32Q8TC27 787 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 PNPT1Q8TCS8 783 aaKnown RBP4.79□□□□□ -1.64
PTPN13-202ENST00000411767 FAM162AQ96A26 154 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 MIEF2Q96C03 454 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 ATP6V1G3Q96LB4 118 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 CALN1Q9BXU9 219 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 CST11Q9H112 138 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 VPS51Q9UID3 782 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 PDS5AQ29RF7 1337 aaKnown RBP4.79□□□□□ -1.64
PTPN13-202ENST00000411767 EVPLLA8MZ36 301 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 LOC110117498-PIK3R3F6TDL0 507 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 ATP8B1O43520 1251 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 SRGAP2O75044 1071 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 S100PP25815 95 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 PGDP52209 483 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 RNASE9P60153 205 aaKnown RBP4.78□□□□□ -1.64
PTPN13-202ENST00000411767 GNA12Q03113 381 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 FOXD4Q12950 439 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-202ENST00000411767 IFT88Q13099 833 aa4.78□□□□□ -1.64
PTPN13-202ENST00000411767 LPIN1Q14693 890 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms