RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 GCFC2P16383 781 aaKnown RBP2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 IFNAR1P17181 557 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 DRD1P21728 446 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 MARCKSP29966 332 aaPredicted RBP2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 WEE1P30291 646 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 RPL9P32969 192 aaKnown RBP2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 MCM4P33991 863 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 DPP6P42658 865 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 BRCC3P46736 316 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 ALDH1A3P47895 512 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 DHPSP49366 369 aaPredicted RBP2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 MCM2P49736 904 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 DGKEP52429 567 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 YARSP54577 528 aaKnown RBP2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 EPHB3P54753 998 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 IRX4P78413 519 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 CACNB1Q02641 598 aaPredicted RBP2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 CYP4A11Q02928 519 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 TNK2Q07912 1038 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 SCAPQ12770 1279 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 PRPF4BQ13523 1007 aaKnown RBP2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 RUNX3Q13761 415 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 HNRNPDQ14103 355 aaKnown RBP2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 MRPL58Q14197 206 aaKnown RBP2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 CTTNQ14247 550 aaKnown RBP2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 DMC1Q14565 340 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 NAB2Q15742 525 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 MAPK6Q16659 721 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 UPP1Q16831 310 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 FAM187BQ17R55 369 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 INF2Q27J81 1249 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 COL28A1Q2UY09 1125 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 DCAF4L1Q3SXM0 396 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 TSGA10IPQ3SY00 556 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 ARHGAP15Q53QZ3 475 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 TRIM61Q5EBN2 209 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 TMEM196Q5HYL7 178 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 WDR44Q5JSH3 913 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 GLRA4Q5JXX5 417 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 GPR158Q5T848 1215 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 PMS2CLQ68D20 193 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 NCAPH2Q6IBW4 605 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 GALNT17Q6IS24 598 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 FSTL4Q6MZW2 842 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZNF280DQ6N043 979 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 CC2D1AQ6P1N0 951 aaPredicted RBP2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 PKN3Q6P5Z2 889 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 CD300LGQ6UXG3 332 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 RNF19BQ6ZMZ0 732 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 SYT13Q7L8C5 426 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 KRT25Q7Z3Z0 450 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 NEK8Q86SG6 692 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 GPIHBP1Q8IV16 184 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 TRIM22Q8IYM9 498 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 BLIDQ8IZY5 108 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 FAM177A1Q8N128 213 aaPredicted RBP2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 HDDC3Q8N4P3 179 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 CHCHD4Q8N4Q1 142 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 C3orf58Q8NDZ4 430 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 MCPH1Q8NEM0 835 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 APPL2Q8NEU8 664 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 TSTD1Q8NFU3 115 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 SHKBP1Q8TBC3 707 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 HNRNPLLQ8WVV9 542 aaKnown RBP2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 PIGKQ92643 395 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 RSPRY1Q96DX4 576 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 DYDC2Q96IM9 177 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZFYVE19Q96K21 471 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 PPP1R10Q96QC0 940 aaKnown RBP2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 HHIPQ96QV1 700 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 NACC1Q96RE7 527 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 NAP1L4Q99733 375 aaKnown RBP2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 FAM83CQ9BQN1 747 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 SLC26A6Q9BXS9 759 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 RNF26Q9BY78 433 aaPredicted RBP2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 OXCT2Q9BYC2 517 aaPredicted RBP2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 C2orf40Q9H1Z8 148 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 CXCL16Q9H2A7 254 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 ATXN3LQ9H3M9 355 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 FZD8Q9H461 694 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 PDZD7Q9H5P4 517 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 CCDC86Q9H6F5 360 aaKnown RBP2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 TASP1Q9H6P5 420 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 KCNMB3Q9NPA1 279 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 ANO2Q9NQ90 1003 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 TOPORSQ9NS56 1045 aaPredicted RBP2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 GKN1Q9NS71 199 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 ANKEF1Q9NU02 776 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 RGL1Q9NZL6 768 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 VPS54Q9P1Q0 977 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 EVLQ9UI08 416 aaPredicted RBP2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 ZMYM5Q9UJ78 669 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 KLK13Q9UKR3 277 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 VAV3Q9UKW4 847 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 PCDHA4Q9UN74 947 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 GDAQ9Y2T3 454 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 YIPF1Q9Y548 306 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 ASB3Q9Y575 518 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 IGSF10Q6WRI0 2623 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 NCANO14594 1321 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms