RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 GAS2L3Q86XJ1 694 aa22.18■■□□□ 1.14
C4orf48-202ENST00000409860 PUF60Q9UHX1 559 aaKnown RBP22.18■■□□□ 1.14
C4orf48-202ENST00000409860 GBF1Q92538 1859 aa22.17■■□□□ 1.14
C4orf48-202ENST00000409860 GTPBP10A4D1E9 387 aaKnown RBP22.17■■□□□ 1.14
C4orf48-202ENST00000409860 KPNA7A9QM74 516 aa22.17■■□□□ 1.14
C4orf48-202ENST00000409860 BRCC3P46736 316 aa22.17■■□□□ 1.14
C4orf48-202ENST00000409860 UBE3AQ05086 875 aa22.17■■□□□ 1.14
C4orf48-202ENST00000409860 TIGD5Q53EQ6 642 aa22.17■■□□□ 1.14
C4orf48-202ENST00000409860 SCARA3Q6AZY7 606 aa22.17■■□□□ 1.14
C4orf48-202ENST00000409860 GBP6Q6ZN66 633 aa22.17■■□□□ 1.14
C4orf48-202ENST00000409860 SUSD3Q96L08 255 aa22.17■■□□□ 1.14
C4orf48-202ENST00000409860 XYLT2Q9H1B5 865 aa22.17■■□□□ 1.14
C4orf48-202ENST00000409860 RBSNQ9H1K0 784 aa22.17■■□□□ 1.14
C4orf48-202ENST00000409860 ZNF576Q9H609 170 aa22.17■■□□□ 1.14
C4orf48-202ENST00000409860 VRTNQ9H8Y1 702 aa22.17■■□□□ 1.14
C4orf48-202ENST00000409860 LZTS1Q9Y250 596 aa22.17■■□□□ 1.14
C4orf48-202ENST00000409860 LGALS16A8MUM7 142 aa22.16■■□□□ 1.14
C4orf48-202ENST00000409860 SOX1O00570 391 aaPredicted RBP22.16■■□□□ 1.14
C4orf48-202ENST00000409860 SPTLC1O15269 473 aa22.16■■□□□ 1.14
C4orf48-202ENST00000409860 ASS1P00966 412 aaKnown RBP22.16■■□□□ 1.14
C4orf48-202ENST00000409860 P4HA1P13674 534 aa22.16■■□□□ 1.14
C4orf48-202ENST00000409860 IGFBP6P24592 240 aaPredicted RBP22.16■■□□□ 1.14
C4orf48-202ENST00000409860 TNNC1P63316 161 aa22.16■■□□□ 1.14
C4orf48-202ENST00000409860 NOP14P78316 857 aaKnown RBP22.16■■□□□ 1.14
C4orf48-202ENST00000409860 GPM6BQ13491 265 aa22.16■■□□□ 1.14
C4orf48-202ENST00000409860 ZNF667Q5HYK9 610 aa22.16■■□□□ 1.14
C4orf48-202ENST00000409860 APTXQ7Z2E3 356 aaKnown RBP22.16■■□□□ 1.14
C4orf48-202ENST00000409860 SEMA4DQ92854 862 aa22.16■■□□□ 1.14
C4orf48-202ENST00000409860 SENP8Q96LD8 212 aa22.16■■□□□ 1.14
C4orf48-202ENST00000409860 HERC2P3Q9BVR0 1158 aa22.16■■□□□ 1.14
C4orf48-202ENST00000409860 GPR62Q9BZJ7 368 aa22.16■■□□□ 1.14
C4orf48-202ENST00000409860 GCNT4Q9P109 453 aa22.16■■□□□ 1.14
C4orf48-202ENST00000409860 H3BNC9 293 aa22.15■■□□□ 1.14
C4orf48-202ENST00000409860 I3L4J1 428 aa22.15■■□□□ 1.14
C4orf48-202ENST00000409860 SYN3O14994 580 aa22.15■■□□□ 1.14
C4orf48-202ENST00000409860 SOD2P04179 222 aa22.15■■□□□ 1.14
C4orf48-202ENST00000409860 ODC1P11926 461 aa22.15■■□□□ 1.14
C4orf48-202ENST00000409860 FANCCQ00597 558 aa22.15■■□□□ 1.14
C4orf48-202ENST00000409860 EXOC3L4Q17RC7 722 aa22.15■■□□□ 1.14
C4orf48-202ENST00000409860 WDR72Q3MJ13 1102 aa22.15■■□□□ 1.14
C4orf48-202ENST00000409860 FAM171A1Q5VUB5 890 aa22.15■■□□□ 1.14
C4orf48-202ENST00000409860 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.15■■□□□ 1.14
C4orf48-202ENST00000409860 PI4K2AQ9BTU6 479 aa22.15■■□□□ 1.14
C4orf48-202ENST00000409860 INTS2Q9H0H0 1204 aaKnown RBP22.15■■□□□ 1.14
C4orf48-202ENST00000409860 ALG13Q9NP73 1137 aaKnown RBP22.15■■□□□ 1.14
C4orf48-202ENST00000409860 GDAP2Q9NXN4 497 aa22.15■■□□□ 1.14
C4orf48-202ENST00000409860 NXF1Q9UBU9 619 aaKnown RBP22.15■■□□□ 1.14
C4orf48-202ENST00000409860 PCDHB8Q9UN66 801 aa22.15■■□□□ 1.14
C4orf48-202ENST00000409860 SNX9Q9Y5X1 595 aa22.15■■□□□ 1.14
C4orf48-202ENST00000409860 M0QZQ0 153 aa22.14■■□□□ 1.13
C4orf48-202ENST00000409860 CYB561D2O14569 222 aa22.14■■□□□ 1.13
C4orf48-202ENST00000409860 HUS1O60921 280 aa22.14■■□□□ 1.13
C4orf48-202ENST00000409860 EFEMP2O95967 443 aa22.14■■□□□ 1.13
C4orf48-202ENST00000409860 BMS1Q14692 1282 aaKnown RBP22.14■■□□□ 1.13
C4orf48-202ENST00000409860 USP41Q3LFD5 358 aa22.14■■□□□ 1.13
C4orf48-202ENST00000409860 HABP4Q5JVS0 413 aaKnown RBP22.14■■□□□ 1.13
C4orf48-202ENST00000409860 ZNF697Q5TEC3 545 aa22.14■■□□□ 1.13
C4orf48-202ENST00000409860 RNF168Q8IYW5 571 aaPredicted RBP22.14■■□□□ 1.13
C4orf48-202ENST00000409860 VPS52Q8N1B4 723 aa22.14■■□□□ 1.13
C4orf48-202ENST00000409860 EHBP1Q8NDI1 1231 aa22.14■■□□□ 1.13
C4orf48-202ENST00000409860 APPL2Q8NEU8 664 aa22.14■■□□□ 1.13
C4orf48-202ENST00000409860 SPPL3Q8TCT6 385 aa22.14■■□□□ 1.13
C4orf48-202ENST00000409860 CRACR2AQ9BSW2 395 aa22.14■■□□□ 1.13
C4orf48-202ENST00000409860 VN1R3Q9BXE9 311 aa22.14■■□□□ 1.13
C4orf48-202ENST00000409860 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.14■■□□□ 1.13
C4orf48-202ENST00000409860 DSEQ9UL01 958 aa22.14■■□□□ 1.13
C4orf48-202ENST00000409860 KIAA1671Q9BY89 1806 aa22.14■■□□□ 1.13
C4orf48-202ENST00000409860 URODP06132 367 aa22.13■■□□□ 1.13
C4orf48-202ENST00000409860 TYMPP19971 482 aa22.13■■□□□ 1.13
C4orf48-202ENST00000409860 UBXN1Q04323 297 aa22.13■■□□□ 1.13
C4orf48-202ENST00000409860 SPOPLQ6IQ16 392 aa22.13■■□□□ 1.13
C4orf48-202ENST00000409860 KIAA1841Q6NSI8 718 aa22.13■■□□□ 1.13
C4orf48-202ENST00000409860 CEP57Q86XR8 500 aa22.13■■□□□ 1.13
C4orf48-202ENST00000409860 TOP6BLQ8N6T0 577 aa22.13■■□□□ 1.13
C4orf48-202ENST00000409860 POF1BQ8WVV4 589 aa22.13■■□□□ 1.13
C4orf48-202ENST00000409860 LRCH3Q96II8 777 aa22.13■■□□□ 1.13
C4orf48-202ENST00000409860 NT5C1BQ96P26 610 aa22.13■■□□□ 1.13
C4orf48-202ENST00000409860 MMS19Q96T76 1030 aa22.13■■□□□ 1.13
C4orf48-202ENST00000409860 TTPALQ9BTX7 342 aa22.13■■□□□ 1.13
C4orf48-202ENST00000409860 NIF3L1Q9GZT8 377 aa22.13■■□□□ 1.13
C4orf48-202ENST00000409860 LMAN2LQ9H0V9 348 aa22.13■■□□□ 1.13
C4orf48-202ENST00000409860 A0A1B0GTH6 734 aa22.12■■□□□ 1.13
C4orf48-202ENST00000409860 GRM6O15303 877 aa22.12■■□□□ 1.13
C4orf48-202ENST00000409860 FGFR3P22607 806 aa22.12■■□□□ 1.13
C4orf48-202ENST00000409860 TKTP29401 623 aaKnown RBP22.12■■□□□ 1.13
C4orf48-202ENST00000409860 GLUD2P49448 558 aa22.12■■□□□ 1.13
C4orf48-202ENST00000409860 UBASH3AP57075 661 aa22.12■■□□□ 1.13
C4orf48-202ENST00000409860 METTL23Q86XA0 190 aa22.12■■□□□ 1.13
C4orf48-202ENST00000409860 LMO3Q8TAP4 145 aa22.12■■□□□ 1.13
C4orf48-202ENST00000409860 GDPD5Q8WTR4 605 aa22.12■■□□□ 1.13
C4orf48-202ENST00000409860 FAXDC2Q96IV6 333 aa22.12■■□□□ 1.13
C4orf48-202ENST00000409860 ZBP1Q9H171 429 aa22.12■■□□□ 1.13
C4orf48-202ENST00000409860 APOBEC3GQ9HC16 384 aaKnown RBP22.12■■□□□ 1.13
C4orf48-202ENST00000409860 RTN4Q9NQC3 1192 aaKnown RBP22.12■■□□□ 1.13
C4orf48-202ENST00000409860 TLR9Q9NR96 1032 aa22.12■■□□□ 1.13
C4orf48-202ENST00000409860 POLIQ9UNA4 740 aa22.12■■□□□ 1.13
C4orf48-202ENST00000409860 EPOPA6NHQ4 379 aa22.11■■□□□ 1.13
C4orf48-202ENST00000409860 LRRN2O75325 713 aa22.11■■□□□ 1.13
C4orf48-202ENST00000409860 TPM3P06753 285 aa22.11■■□□□ 1.13
C4orf48-202ENST00000409860 LRMPQ12912 555 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms