RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 CETN1Q12798 172 aa16.38■□□□□ 0.21
LIMS2-205ENST00000409455 BFSP1Q12934 665 aa16.38■□□□□ 0.21
LIMS2-205ENST00000409455 ZRSR2Q15696 482 aaKnown RBP16.38■□□□□ 0.21
LIMS2-205ENST00000409455 SLC5A9Q2M3M2 681 aa16.38■□□□□ 0.21
LIMS2-205ENST00000409455 TMEM63BQ5T3F8 832 aa16.38■□□□□ 0.21
LIMS2-205ENST00000409455 RGS9BPQ6ZS82 235 aa16.38■□□□□ 0.21
LIMS2-205ENST00000409455 SCYL3Q8IZE3 742 aa16.38■□□□□ 0.21
LIMS2-205ENST00000409455 SPOCK2Q92563 424 aa16.38■□□□□ 0.21
LIMS2-205ENST00000409455 KIFAP3Q92845 792 aa16.38■□□□□ 0.21
LIMS2-205ENST00000409455 TRAPPC9Q96Q05 1148 aa16.38■□□□□ 0.21
LIMS2-205ENST00000409455 SLCO1B3Q9NPD5 702 aa16.38■□□□□ 0.21
LIMS2-205ENST00000409455 UBN1Q9NPG3 1134 aa16.38■□□□□ 0.21
LIMS2-205ENST00000409455 SORBS3O60504 671 aa16.38■□□□□ 0.21
LIMS2-205ENST00000409455 CFBP00751 764 aa16.38■□□□□ 0.21
LIMS2-205ENST00000409455 IVDP26440 423 aa16.38■□□□□ 0.21
LIMS2-205ENST00000409455 TAF1BQ53T94 588 aaPredicted RBP16.38■□□□□ 0.21
LIMS2-205ENST00000409455 RNF220Q5VTB9 566 aa16.38■□□□□ 0.21
LIMS2-205ENST00000409455 STXBP4Q6ZWJ1 553 aa16.38■□□□□ 0.21
LIMS2-205ENST00000409455 MAIP1Q8WWC4 291 aa16.38■□□□□ 0.21
LIMS2-205ENST00000409455 ZFP69BQ9UJL9 534 aa16.38■□□□□ 0.21
LIMS2-205ENST00000409455 SBF1O95248 1867 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 PIK3CDO00329 1044 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 WDR46O15213 610 aaKnown RBP16.37■□□□□ 0.21
LIMS2-205ENST00000409455 EDF1O60869 148 aaKnown RBP16.37■□□□□ 0.21
LIMS2-205ENST00000409455 SPAG7O75391 227 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 FOSP01100 380 aaPredicted RBP16.37■□□□□ 0.21
LIMS2-205ENST00000409455 GZMAP12544 262 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 SSR1P43307 286 aaKnown RBP16.37■□□□□ 0.21
LIMS2-205ENST00000409455 VPS41P49754 854 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 PDK4Q16654 411 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 C9orf131Q5VYM1 1079 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 RINT1Q6NUQ1 792 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 LDHDQ86WU2 507 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 CPNE8Q86YQ8 564 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 C10orf82Q8WW14 230 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 ATG4AQ8WYN0 398 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 KLRG1Q96E93 195 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 PARVGQ9HBI0 331 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 AGPAT3Q9NRZ7 376 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 CHST7Q9NS84 486 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 LNPEPQ9UIQ6 1025 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 PTPRAP18433 802 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 MUTP22033 750 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 PRKG1Q13976 671 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 RCN2Q14257 317 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 OR52E8Q6IFG1 317 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 BBOF1Q8ND07 529 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 UCMAQ8WVF2 138 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 ZNF653Q96CK0 615 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 FGD4Q96M96 766 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 AGBL1Q96MI9 1066 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 TLE6Q9H808 572 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 EURLQ9NYK6 297 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 UBE4BO95155 1302 aa16.37■□□□□ 0.21
LIMS2-205ENST00000409455 DICER1Q9UPY3 1922 aaKnown RBP16.36■□□□□ 0.21
LIMS2-205ENST00000409455 EXOC1LA0A1B0GW35 172 aa16.36■□□□□ 0.21
LIMS2-205ENST00000409455 PRPF4O43172 522 aaKnown RBP eCLIP16.36■□□□□ 0.21
LIMS2-205ENST00000409455 EXOC3O60645 756 aa16.36■□□□□ 0.21
LIMS2-205ENST00000409455 SREBF1P36956 1147 aa16.36■□□□□ 0.21
LIMS2-205ENST00000409455 LAMB3Q13751 1172 aa16.36■□□□□ 0.21
LIMS2-205ENST00000409455 Q4G0T1 1027 aa16.36■□□□□ 0.21
LIMS2-205ENST00000409455 SNX30Q5VWJ9 437 aa16.36■□□□□ 0.21
LIMS2-205ENST00000409455 TRABD2AQ86V40 505 aa16.36■□□□□ 0.21
LIMS2-205ENST00000409455 KSR1Q8IVT5 923 aa16.36■□□□□ 0.21
LIMS2-205ENST00000409455 LMO3Q8TAP4 145 aa16.36■□□□□ 0.21
LIMS2-205ENST00000409455 PSPC1Q8WXF1 523 aaKnown RBP16.36■□□□□ 0.21
LIMS2-205ENST00000409455 C9orf72Q96LT7 481 aa16.36■□□□□ 0.21
LIMS2-205ENST00000409455 FAM20AQ96MK3 541 aa16.36■□□□□ 0.21
LIMS2-205ENST00000409455 PWWP2AQ96N64 755 aa16.36■□□□□ 0.21
LIMS2-205ENST00000409455 PICK1Q9NRD5 415 aa16.36■□□□□ 0.21
LIMS2-205ENST00000409455 ADARB2Q9NS39 739 aaKnown RBP16.36■□□□□ 0.21
LIMS2-205ENST00000409455 UVRAGQ9P2Y5 699 aa16.36■□□□□ 0.21
LIMS2-205ENST00000409455 SMG5Q9UPR3 1016 aaKnown RBP16.36■□□□□ 0.21
LIMS2-205ENST00000409455 ZHX2Q9Y6X8 837 aa16.36■□□□□ 0.21
LIMS2-205ENST00000409455 CYP1A2P05177 515 aa16.36■□□□□ 0.21
LIMS2-205ENST00000409455 POLE2P56282 527 aa16.36■□□□□ 0.21
LIMS2-205ENST00000409455 SLC45A4Q5BKX6 768 aa16.36■□□□□ 0.21
LIMS2-205ENST00000409455 FYB2Q5VWT5 728 aa16.36■□□□□ 0.21
LIMS2-205ENST00000409455 C4orf50Q6ZRC1 276 aa16.36■□□□□ 0.21
LIMS2-205ENST00000409455 MAML1Q92585 1016 aa16.36■□□□□ 0.21
LIMS2-205ENST00000409455 SMC6Q96SB8 1091 aa16.36■□□□□ 0.21
LIMS2-205ENST00000409455 PPP1R12CQ9BZL4 782 aa16.36■□□□□ 0.21
LIMS2-205ENST00000409455 SAR1AQ9NR31 198 aa16.36■□□□□ 0.21
LIMS2-205ENST00000409455 DMAC2Q9NW81 257 aa16.36■□□□□ 0.21
LIMS2-205ENST00000409455 RGL1Q9NZL6 768 aa16.36■□□□□ 0.21
LIMS2-205ENST00000409455 MRPL11Q9Y3B7 192 aaKnown RBP16.36■□□□□ 0.21
LIMS2-205ENST00000409455 PPP2R3BQ9Y5P8 575 aa16.36■□□□□ 0.21
LIMS2-205ENST00000409455 ZNF536O15090 1300 aa16.35■□□□□ 0.21
LIMS2-205ENST00000409455 FAM86B1E9PN63 330 aa16.35■□□□□ 0.21
LIMS2-205ENST00000409455 FAM86B2P0C5J1 330 aa16.35■□□□□ 0.21
LIMS2-205ENST00000409455 BACE1P56817 501 aa16.35■□□□□ 0.21
LIMS2-205ENST00000409455 OCRLQ01968 901 aa16.35■□□□□ 0.21
LIMS2-205ENST00000409455 RCN1Q15293 331 aa16.35■□□□□ 0.21
LIMS2-205ENST00000409455 KHDC1Q4VXA5 237 aaKnown RBP16.35■□□□□ 0.21
LIMS2-205ENST00000409455 CEP128Q6ZU80 1094 aa16.35■□□□□ 0.21
LIMS2-205ENST00000409455 ZC3H18Q86VM9 953 aaKnown RBP16.35■□□□□ 0.21
LIMS2-205ENST00000409455 RELL1Q8IUW5 271 aa16.35■□□□□ 0.21
LIMS2-205ENST00000409455 FAM178BQ8IXR5 827 aa16.35■□□□□ 0.21
LIMS2-205ENST00000409455 RDH13Q8NBN7 331 aa16.35■□□□□ 0.21
LIMS2-205ENST00000409455 ZNF280CQ8ND82 737 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms