RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 RRAGAQ7L523 313 aa15.16■□□□□ 0.02
CHRNA1-204ENST00000409323 TAS1R1Q7RTX1 841 aa15.16■□□□□ 0.02
CHRNA1-204ENST00000409323 KAT5Q92993 513 aa15.16■□□□□ 0.02
CHRNA1-204ENST00000409323 TSPAN18Q96SJ8 248 aa15.16■□□□□ 0.02
CHRNA1-204ENST00000409323 MMS19Q96T76 1030 aa15.16■□□□□ 0.02
CHRNA1-204ENST00000409323 ARID3AQ99856 593 aa15.16■□□□□ 0.02
CHRNA1-204ENST00000409323 GPR62Q9BZJ7 368 aa15.16■□□□□ 0.02
CHRNA1-204ENST00000409323 FAM207AQ9NSI2 230 aaPredicted RBP15.16■□□□□ 0.02
CHRNA1-204ENST00000409323 AJAP1Q9UKB5 411 aaPredicted RBP15.16■□□□□ 0.02
CHRNA1-204ENST00000409323 PCDHA11Q9Y5I1 949 aa15.16■□□□□ 0.02
CHRNA1-204ENST00000409323 VWA8A3KMH1 1905 aa15.16■□□□□ 0.02
CHRNA1-204ENST00000409323 LAG3P18627 525 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 DNAJB2P25686 324 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 RPL9P32969 192 aaKnown RBP15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 TAF6P49848 677 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 TAP1Q03518 808 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 UVSSAQ2YD98 709 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 PPP2R2DQ66LE6 453 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 TRIM65Q6PJ69 517 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 DCLRE1AQ6PJP8 1040 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 DSTYKQ6XUX3 929 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 CEP57Q86XR8 500 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 KLHL23Q8NBE8 558 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 EHBP1Q8NDI1 1231 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 DDX27Q96GQ7 796 aaKnown RBP15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 ZNF560Q96MR9 790 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 UROC1Q96N76 676 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 TMEM175Q9BSA9 504 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 VN1R3Q9BXE9 311 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 SMYD3Q9H7B4 428 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 SIX2Q9NPC8 291 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 MSRAQ9UJ68 235 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 ADAM28Q9UKQ2 775 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 COQ4Q9Y3A0 265 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 MYO9BQ13459 2157 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 KPNA7A9QM74 516 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 HCRTO43612 131 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 ASS1P00966 412 aaKnown RBP15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 CDH8P55286 799 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 CETN1Q12798 172 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 MYO1EQ12965 1108 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 ZNF667Q5HYK9 610 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 PHLDB3Q6NSJ2 640 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 SLC39A11Q8N1S5 342 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 PPM1KQ8N3J5 372 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 CLP1Q92989 425 aaKnown RBP15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 IGSF21Q96ID5 467 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 COLEC11Q9BWP8 271 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 IMPG2Q9BZV3 1241 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 SDCBP2Q9H190 292 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 ALG13Q9NP73 1137 aaKnown RBP15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 SIK3Q9Y2K2 1263 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 PCDHB12Q9Y5F1 795 aa15.15■□□□□ 0.02
CHRNA1-204ENST00000409323 CYB561D2O14569 222 aa15.14■□□□□ 0.01
CHRNA1-204ENST00000409323 P4HA2O15460 535 aa15.14■□□□□ 0.01
CHRNA1-204ENST00000409323 FGF18O76093 207 aa15.14■□□□□ 0.01
CHRNA1-204ENST00000409323 WEE2P0C1S8 567 aa15.14■□□□□ 0.01
CHRNA1-204ENST00000409323 TKTP29401 623 aaKnown RBP15.14■□□□□ 0.01
CHRNA1-204ENST00000409323 TNNC1P63316 161 aa15.14■□□□□ 0.01
CHRNA1-204ENST00000409323 SGSM1Q2NKQ1 1148 aa15.14■□□□□ 0.01
CHRNA1-204ENST00000409323 SV2CQ496J9 727 aa15.14■□□□□ 0.01
CHRNA1-204ENST00000409323 WDR44Q5JSH3 913 aa15.14■□□□□ 0.01
CHRNA1-204ENST00000409323 FUT10Q6P4F1 479 aa15.14■□□□□ 0.01
CHRNA1-204ENST00000409323 LRRC52Q8N7C0 313 aa15.14■□□□□ 0.01
CHRNA1-204ENST00000409323 ARNTL2Q8WYA1 636 aa15.14■□□□□ 0.01
CHRNA1-204ENST00000409323 SENP8Q96LD8 212 aa15.14■□□□□ 0.01
CHRNA1-204ENST00000409323 NT5C1BQ96P26 610 aa15.14■□□□□ 0.01
CHRNA1-204ENST00000409323 UBE2TQ9NPD8 197 aaPredicted RBP15.14■□□□□ 0.01
CHRNA1-204ENST00000409323 SPG21Q9NZD8 308 aa15.14■□□□□ 0.01
CHRNA1-204ENST00000409323 FHOD1Q9Y613 1164 aa15.14■□□□□ 0.01
CHRNA1-204ENST00000409323 EPOPA6NHQ4 379 aa15.13■□□□□ 0.01
CHRNA1-204ENST00000409323 RFXAPO00287 272 aa15.13■□□□□ 0.01
CHRNA1-204ENST00000409323 C2CD2LO14523 706 aa15.13■□□□□ 0.01
CHRNA1-204ENST00000409323 PNMA6AP0CW24 399 aaPredicted RBP15.13■□□□□ 0.01
CHRNA1-204ENST00000409323 CD58P19256 250 aa15.13■□□□□ 0.01
CHRNA1-204ENST00000409323 BMPR1AP36894 532 aa15.13■□□□□ 0.01
CHRNA1-204ENST00000409323 ZNF75DP51815 510 aa15.13■□□□□ 0.01
CHRNA1-204ENST00000409323 ORC1Q13415 861 aa15.13■□□□□ 0.01
CHRNA1-204ENST00000409323 RAB30Q15771 203 aa15.13■□□□□ 0.01
CHRNA1-204ENST00000409323 ARHGAP44Q17R89 818 aa15.13■□□□□ 0.01
CHRNA1-204ENST00000409323 PRPF38BQ5VTL8 546 aaKnown RBP15.13■□□□□ 0.01
CHRNA1-204ENST00000409323 FAM171A1Q5VUB5 890 aa15.13■□□□□ 0.01
CHRNA1-204ENST00000409323 WSCD1Q658N2 575 aa15.13■□□□□ 0.01
CHRNA1-204ENST00000409323 DPY19L2P1Q6NXN4 242 aa15.13■□□□□ 0.01
CHRNA1-204ENST00000409323 SARM1Q6SZW1 724 aa15.13■□□□□ 0.01
CHRNA1-204ENST00000409323 CCDC150Q8NCX0 1101 aa15.13■□□□□ 0.01
CHRNA1-204ENST00000409323 AUTS2Q8WXX7 1259 aa15.13■□□□□ 0.01
CHRNA1-204ENST00000409323 RSPH1Q8WYR4 309 aa15.13■□□□□ 0.01
CHRNA1-204ENST00000409323 TIFAQ96CG3 184 aa15.13■□□□□ 0.01
CHRNA1-204ENST00000409323 TMEM169Q96HH4 297 aa15.13■□□□□ 0.01
CHRNA1-204ENST00000409323 MRPL45Q9BRJ2 306 aaKnown RBP15.13■□□□□ 0.01
CHRNA1-204ENST00000409323 SLC28A3Q9HAS3 691 aa15.13■□□□□ 0.01
CHRNA1-204ENST00000409323 NLRC4Q9NPP4 1024 aa15.13■□□□□ 0.01
CHRNA1-204ENST00000409323 AAASQ9NRG9 546 aa15.13■□□□□ 0.01
CHRNA1-204ENST00000409323 L1RE1Q9UN81 338 aa15.13■□□□□ 0.01
CHRNA1-204ENST00000409323 PCDHGC5Q9Y5F6 944 aa15.13■□□□□ 0.01
CHRNA1-204ENST00000409323 TSC2P49815 1807 aa15.13■□□□□ 0.01
CHRNA1-204ENST00000409323 GTPBP10A4D1E9 387 aaKnown RBP15.12■□□□□ 0.01
CHRNA1-204ENST00000409323 SOX1O00570 391 aaPredicted RBP15.12■□□□□ 0.01
CHRNA1-204ENST00000409323 PMM2O15305 246 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms