RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 FBXO47Q5MNV8 452 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 TMEM270Q6UE05 265 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 SLC47A2Q86VL8 602 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 RBBP8NLQ8NC74 664 aaPredicted RBP11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 RSPH1Q8WYR4 309 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 ZNF560Q96MR9 790 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 EIF2AQ9BY44 585 aaKnown RBP11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 IRX2Q9BZI1 471 aaPredicted RBP11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 PDCL3Q9H2J4 239 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 ERVK-5Q9HDB9 667 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 AVENQ9NQS1 362 aaPredicted RBP11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 PAK6Q9NQU5 681 aaPredicted RBP11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 STARD7Q9NQZ5 370 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 CISHQ9NSE2 258 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 WBP1LQ9NX94 342 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 SIX4Q9UIU6 781 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 GTF3C4Q9UKN8 822 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 PCDHGC3Q9UN70 934 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 AGAP1Q9UPQ3 857 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 IPPQ9Y573 584 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 CEP83Q9Y592 693 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 MRFAP1Q9Y605 127 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 PTCH2Q9Y6C5 1203 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 TRIP11Q15643 1979 aa11.03□□□□□ -0.64
SNORD88C-201ENST00000408061 SMIM28A0A1B0GU29 152 aa11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 A0A1W2PQ45 241 aaPredicted RBP11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 A0A1W2PQY0 241 aa11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 DYNC1I1O14576 645 aa11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 CTIFO43310 598 aaKnown RBP11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 RECQL4O94761 1208 aa11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 PNMA6AP0CW24 399 aaPredicted RBP11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 COL6A1P12109 1028 aa11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 ITGA4P13612 1032 aa11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 HSPA6P17066 643 aa11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 LRPAP1P30533 357 aa11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 GNA15P30679 374 aa11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 NOP2P46087 812 aaKnown RBP11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 CDK7P50613 346 aa11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 TNNC1P63316 161 aa11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 CKAP4Q07065 602 aaKnown RBP11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 INCA1Q0VD86 236 aa11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 PAK2Q13177 524 aa11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 BFSP2Q13515 415 aa11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 PKN2Q16513 984 aaKnown RBP11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 CLEC16AQ2KHT3 1053 aa11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 LIN9Q5TKA1 542 aa11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 SPOPLQ6IQ16 392 aa11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 SLFN11Q7Z7L1 901 aa11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 UNC93AQ86WB7 457 aa11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 OLIG1Q8TAK6 271 aa11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 ZNF606Q8WXB4 792 aa11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 FTHL17Q9BXU8 183 aa11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 MIS12Q9H081 205 aa11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 LHX5Q9H2C1 402 aa11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 FAM105AQ9NUU6 356 aa11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 SEPT11Q9NVA2 429 aaKnown RBP11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 GDAP2Q9NXN4 497 aa11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 OGDHLQ9ULD0 1010 aa11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 DUSP10Q9Y6W6 482 aa11.02□□□□□ -0.65
SNORD88C-201ENST00000408061 A0A0U1RQF3 1178 aa11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 A0A0U1RQJ8 604 aa11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 EFCAB8A8MWE9 144 aa11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 PIRO00625 290 aa11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 MEFVO15553 781 aaPredicted RBP11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 CLSTN1O94985 981 aa11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 EOMESO95936 686 aa11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 ABL1P00519 1130 aa11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 MYCNP04198 464 aaPredicted RBP11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 CYP1A2P05177 515 aa11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 TUBBP07437 444 aa11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 MMEP08473 750 aa11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 VDRP11473 427 aa11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 UNGP13051 313 aaPredicted RBP11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 POLR2BP30876 1174 aaKnown RBP11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 RPL9P32969 192 aaKnown RBP11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 CDH5P33151 784 aaPredicted RBP11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 ASPAP45381 313 aa11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 NSFP46459 744 aaKnown RBP11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 SNX16P57768 344 aa11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 AMPD2Q01433 879 aa11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 CENPCQ03188 943 aa11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 ITIH3Q06033 890 aa11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 C1QBPQ07021 282 aaKnown RBP11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 NFX1Q12986 1120 aaKnown RBP11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 DSC3Q14574 896 aa11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 SV2CQ496J9 727 aa11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 PHF13Q86YI8 300 aaPredicted RBP11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 TMEM35BQ8NCS4 154 aa11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 MSANTD4Q8NCY6 345 aa11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 SMG8Q8ND04 991 aaKnown RBP11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 TPCN2Q8NHX9 752 aa11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 SPATA18Q8TC71 538 aa11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 SLC20A1Q8WUM9 679 aa11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 ATRIPQ8WXE1 791 aa11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 RPS6KC1Q96S38 1066 aa11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 MRPL47Q9HD33 250 aaKnown RBP11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 TRIM10Q9UDY6 481 aa11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 PARP2Q9UGN5 583 aa11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 PADI3Q9ULW8 664 aa11.01□□□□□ -0.65
SNORD88C-201ENST00000408061 BARX2Q9UMQ3 279 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms