RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 ANP32DO95626 131 aa13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 CETPP11597 493 aa13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 RGS9BPQ6ZS82 235 aa13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 TRIML2Q8N7C3 387 aa13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 GMCL1P1Q8NEA9 526 aa13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 EPN3Q9H201 632 aa13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 PPCSQ9HAB8 311 aa13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 MOSPD1Q9UJG1 213 aa13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 FAM205AQ6ZU69 1335 aa13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 CCL15-CCL14A0A0B4J2E2 113 aa13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 PLEKP08567 350 aaPredicted RBP13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 LAMC2Q13753 1193 aa13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 CCL15Q16663 113 aa13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 TTI2Q6NXR4 508 aa13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 FAM118BQ9BPY3 351 aa13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 ERP44Q9BS26 406 aa13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 ADAM33Q9BZ11 813 aa13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 ARL2BPQ9Y2Y0 163 aa13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 ARP10275 920 aa13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 BRD2P25440 801 aaKnown RBP13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 ACCSLQ4AC99 568 aa13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 PAK5Q9P286 719 aa13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 SMAPO00193 183 aa13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 PPFIA2O75334 1257 aa13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 DNAJC8O75937 253 aaPredicted RBP13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 PON1P27169 355 aa13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 PKN1Q16512 942 aa13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 RAET1EQ8TD07 263 aa13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 THAP2Q9H0W7 228 aa13.97□□□□□ -0.17
CACNA1C-222ENST00000406454 IQGAP1P46940 1657 aa13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 GIT2Q14161 759 aa13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 UBA3Q8TBC4 463 aa13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 N4BP2L2Q92802 583 aaPredicted RBP13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 ZKSCAN4Q969J2 545 aaPredicted RBP13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 CELF4Q9BZC1 486 aaKnown RBP13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 SLIT1O75093 1534 aa13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 GAS2O43903 313 aaKnown RBP13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 CST8O60676 142 aa13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 SERPINB9P50453 376 aa13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 COL23A1Q86Y22 540 aaPredicted RBP13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 CNPY4Q8N129 248 aa13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 USP33Q8TEY7 942 aa13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 GOLGA7BQ2TAP0 167 aa13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 KDELC2Q7Z4H8 507 aa13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 DDX50Q9BQ39 737 aaKnown RBP13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 IRAK4Q9NWZ3 460 aa13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 NAGPAQ9UK23 515 aa13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 COL3A1P02461 1466 aaPredicted RBP13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 ESRRBO95718 433 aa13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 INPP1P49441 399 aa13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 ZNF157P51786 506 aaPredicted RBP13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 CUL2Q13617 745 aa13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 Q4G0T1 1027 aa13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 FIGNQ5HY92 759 aa13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 ACAD10Q6JQN1 1059 aa13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 DDX42Q86XP3 938 aaKnown RBP eCLIP13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 ATPAF2Q8N5M1 289 aa13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 SGSM3Q96HU1 749 aa13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 NDFIP2Q9NV92 336 aa13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 NDE1Q9NXR1 346 aa13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 DBR1Q9UK59 544 aaKnown RBP13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.96□□□□□ -0.17
CACNA1C-222ENST00000406454 RRN3P2A6NIE6 340 aa13.96□□□□□ -0.18
CACNA1C-222ENST00000406454 DGKDQ16760 1214 aa13.96□□□□□ -0.18
CACNA1C-222ENST00000406454 SAMD3Q8N6K7 520 aa13.96□□□□□ -0.18
CACNA1C-222ENST00000406454 ZNF473Q8WTR7 871 aaKnown RBP13.96□□□□□ -0.18
CACNA1C-222ENST00000406454 KRT35Q92764 455 aa13.96□□□□□ -0.18
CACNA1C-222ENST00000406454 XPO6Q96QU8 1125 aaKnown RBP13.96□□□□□ -0.18
CACNA1C-222ENST00000406454 SEMA6BQ9H3T3 888 aa13.96□□□□□ -0.18
CACNA1C-222ENST00000406454 RIOX1Q9H6W3 641 aa13.96□□□□□ -0.18
CACNA1C-222ENST00000406454 METTL5Q9NRN9 209 aaKnown RBP13.96□□□□□ -0.18
CACNA1C-222ENST00000406454 FARP1Q9Y4F1 1045 aaPredicted RBP13.96□□□□□ -0.18
CACNA1C-222ENST00000406454 TMEM247A6NEH6 219 aa13.96□□□□□ -0.18
CACNA1C-222ENST00000406454 IL1R1P14778 569 aa13.96□□□□□ -0.18
CACNA1C-222ENST00000406454 ITGA8P53708 1063 aa13.96□□□□□ -0.18
CACNA1C-222ENST00000406454 C4orf33Q8N1A6 199 aa13.96□□□□□ -0.18
CACNA1C-222ENST00000406454 TPCN2Q8NHX9 752 aa13.96□□□□□ -0.18
CACNA1C-222ENST00000406454 RIN2Q8WYP3 895 aaPredicted RBP13.96□□□□□ -0.18
CACNA1C-222ENST00000406454 ROPN1BQ9BZX4 212 aaPredicted RBP13.96□□□□□ -0.18
CACNA1C-222ENST00000406454 ROPN1Q9HAT0 212 aaPredicted RBP13.96□□□□□ -0.18
CACNA1C-222ENST00000406454 ZFYVE28Q9HCC9 887 aa13.96□□□□□ -0.18
CACNA1C-222ENST00000406454 ADA2Q9NZK5 511 aa13.96□□□□□ -0.18
CACNA1C-222ENST00000406454 CHORDC1Q9UHD1 332 aaPredicted RBP13.96□□□□□ -0.18
CACNA1C-222ENST00000406454 TMX2Q9Y320 296 aa13.96□□□□□ -0.18
CACNA1C-222ENST00000406454 DDTLA6NHG4 134 aaPredicted RBP13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 COILP38432 576 aaPredicted RBP13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 MAGEA4P43358 317 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 C1orf131Q8NDD1 294 aaKnown RBP13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 ZIM3Q96PE6 472 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 CARD9Q9H257 536 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 CYP4F11Q9HBI6 524 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 CHMP2BQ9UQN3 213 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 PXDNQ92626 1479 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 A0A087X0T9 212 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 NPTXRO95502 500 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 FAM228BP0C875 321 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 HPDLQ96IR7 371 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 GPRC5CQ9NQ84 441 aa13.95□□□□□ -0.18
CACNA1C-222ENST00000406454 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms