RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 COL9A2Q14055 689 aaPredicted RBP6.81□□□□□ -1.32
RPA3-204ENST00000406109 GRM2Q14416 872 aa6.81□□□□□ -1.32
RPA3-204ENST00000406109 ZRSR1Q15695 479 aaKnown RBP6.81□□□□□ -1.32
RPA3-204ENST00000406109 FAM78AQ5JUQ0 283 aa6.81□□□□□ -1.32
RPA3-204ENST00000406109 RTL10Q7L3V2 364 aa6.81□□□□□ -1.32
RPA3-204ENST00000406109 CATSPER3Q86XQ3 398 aa6.81□□□□□ -1.32
RPA3-204ENST00000406109 PLPP6Q8IY26 295 aa6.81□□□□□ -1.32
RPA3-204ENST00000406109 PIGOQ8TEQ8 1089 aa6.81□□□□□ -1.32
RPA3-204ENST00000406109 TCP11Q8WWU5 503 aa6.81□□□□□ -1.32
RPA3-204ENST00000406109 DNASE1L2Q92874 299 aa6.81□□□□□ -1.32
RPA3-204ENST00000406109 CHAMP1Q96JM3 812 aa6.81□□□□□ -1.32
RPA3-204ENST00000406109 ASB16Q96NS5 453 aa6.81□□□□□ -1.32
RPA3-204ENST00000406109 NACC1Q96RE7 527 aa6.81□□□□□ -1.32
RPA3-204ENST00000406109 MTRQ99707 1265 aa6.81□□□□□ -1.32
RPA3-204ENST00000406109 POLR3CQ9BUI4 534 aaPredicted RBP6.81□□□□□ -1.32
RPA3-204ENST00000406109 LMAN1LQ9HAT1 526 aa6.81□□□□□ -1.32
RPA3-204ENST00000406109 ZNF334Q9HCZ1 680 aaPredicted RBP6.81□□□□□ -1.32
RPA3-204ENST00000406109 TUFT1Q9NNX1 390 aa6.81□□□□□ -1.32
RPA3-204ENST00000406109 TRPV5Q9NQA5 729 aa6.81□□□□□ -1.32
RPA3-204ENST00000406109 MTRRQ9UBK8 725 aa6.81□□□□□ -1.32
RPA3-204ENST00000406109 PARP2Q9UGN5 583 aa6.81□□□□□ -1.32
RPA3-204ENST00000406109 MRPS17Q9Y2R5 130 aaKnown RBP6.81□□□□□ -1.32
RPA3-204ENST00000406109 MRPS23Q9Y3D9 190 aaKnown RBP6.81□□□□□ -1.32
RPA3-204ENST00000406109 PDCD11Q14690 1871 aaKnown RBP6.81□□□□□ -1.32
RPA3-204ENST00000406109 APC2O95996 2303 aa6.81□□□□□ -1.32
RPA3-204ENST00000406109 PP2D1A8MPX8 630 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 CHURC1-FNTBB4DL54 471 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 MAN2B1O00754 1011 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 ABLIM3O94929 683 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 PAPSS2O95340 614 aaPredicted RBP6.8□□□□□ -1.32
RPA3-204ENST00000406109 SEC24AO95486 1093 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 BMP15O95972 392 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 SPATA31C1P0DKV0 1188 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 ZSCAN22P10073 491 aaPredicted RBP6.8□□□□□ -1.32
RPA3-204ENST00000406109 XRCC6P12956 609 aaKnown RBP eCLIP6.8□□□□□ -1.32
RPA3-204ENST00000406109 RPA1P27694 616 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 MARCKSP29966 332 aaPredicted RBP6.8□□□□□ -1.32
RPA3-204ENST00000406109 CXCL12P48061 93 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 FNTBP49356 437 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 CCR3P51677 355 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 LIMK1P53667 647 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 FOXK1P85037 733 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 SIM2Q14190 667 aaPredicted RBP6.8□□□□□ -1.32
RPA3-204ENST00000406109 ECM1Q16610 540 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 KRT79Q5XKE5 535 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 ARL6IP4Q66PJ3 421 aaKnown RBP6.8□□□□□ -1.32
RPA3-204ENST00000406109 VITQ6UXI7 678 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.8□□□□□ -1.32
RPA3-204ENST00000406109 PRR23BQ6ZRT6 265 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 MAEAQ7L5Y9 396 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 NAV2Q8IVL1 2488 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 C3orf58Q8NDZ4 430 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 SNX29Q8TEQ0 813 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 FAM3CQ92520 227 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 RSPRY1Q96DX4 576 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 DDX27Q96GQ7 796 aaKnown RBP6.8□□□□□ -1.32
RPA3-204ENST00000406109 CCDC43Q96MW1 224 aaKnown RBP6.8□□□□□ -1.32
RPA3-204ENST00000406109 ZNF396Q96N95 335 aaPredicted RBP6.8□□□□□ -1.32
RPA3-204ENST00000406109 PLIN2Q99541 437 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 IER2Q9BTL4 223 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 TRIM6Q9C030 488 aaPredicted RBP6.8□□□□□ -1.32
RPA3-204ENST00000406109 FZD8Q9H461 694 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 PDZD7Q9H5P4 517 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 ANKEF1Q9NU02 776 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 SNTG2Q9NY99 539 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 ANGPTL2Q9UKU9 493 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 RAB23Q9ULC3 237 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 KIAA1024Q9UPX6 916 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 DNM3Q9UQ16 869 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 USP20Q9Y2K6 914 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 BACE2Q9Y5Z0 518 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 CDY1Q9Y6F8 540 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 PI4KAP42356 2102 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 TENM4Q6N022 2769 aa6.8□□□□□ -1.32
RPA3-204ENST00000406109 WDR27A2RRH5 827 aa6.79□□□□□ -1.32
RPA3-204ENST00000406109 ARHGEF35A5YM69 484 aa6.79□□□□□ -1.32
RPA3-204ENST00000406109 TMEM189-UBE2V1I3L0A0 370 aa6.79□□□□□ -1.32
RPA3-204ENST00000406109 I3L4J1 428 aa6.79□□□□□ -1.32
RPA3-204ENST00000406109 TK2O00142 265 aa6.79□□□□□ -1.32
RPA3-204ENST00000406109 RECQL4O94761 1208 aa6.79□□□□□ -1.32
RPA3-204ENST00000406109 MICAL2O94851 1124 aa6.79□□□□□ -1.32
RPA3-204ENST00000406109 LYPLA2O95372 231 aa6.79□□□□□ -1.32
RPA3-204ENST00000406109 F13A1P00488 732 aa6.79□□□□□ -1.32
RPA3-204ENST00000406109 THP07101 528 aa6.79□□□□□ -1.32
RPA3-204ENST00000406109 PTPN2P17706 415 aa6.79□□□□□ -1.32
RPA3-204ENST00000406109 TKTP29401 623 aaKnown RBP6.79□□□□□ -1.32
RPA3-204ENST00000406109 UBA7P41226 1012 aa6.79□□□□□ -1.32
RPA3-204ENST00000406109 VIPR2P41587 438 aa6.79□□□□□ -1.32
RPA3-204ENST00000406109 RARRES1P49788 294 aa6.79□□□□□ -1.32
RPA3-204ENST00000406109 ROR1Q01973 937 aa6.79□□□□□ -1.32
RPA3-204ENST00000406109 NCBP1Q09161 790 aaKnown RBP6.79□□□□□ -1.32
RPA3-204ENST00000406109 ELAVL2Q12926 359 aaKnown RBP6.79□□□□□ -1.32
RPA3-204ENST00000406109 PKP1Q13835 747 aa6.79□□□□□ -1.32
RPA3-204ENST00000406109 DSG2Q14126 1118 aa6.79□□□□□ -1.32
RPA3-204ENST00000406109 TFDP1Q14186 410 aa6.79□□□□□ -1.32
RPA3-204ENST00000406109 SF3A2Q15428 464 aaKnown RBP6.79□□□□□ -1.32
RPA3-204ENST00000406109 UPP1Q16831 310 aa6.79□□□□□ -1.32
RPA3-204ENST00000406109 FAM187BQ17R55 369 aa6.79□□□□□ -1.32
RPA3-204ENST00000406109 HAUS3Q68CZ6 603 aa6.79□□□□□ -1.32
RPA3-204ENST00000406109 CDCA2Q69YH5 1023 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms