RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 PRPF18Q99633 342 aaKnown RBP6.17□□□□□ -1.42
HDAC9-203ENST00000406072 EDEM3Q9BZQ6 932 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 IMPG2Q9BZV3 1241 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 FHDC1Q9C0D6 1143 aaPredicted RBP6.17□□□□□ -1.42
HDAC9-203ENST00000406072 NACA2Q9H009 215 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 BHMT2Q9H2M3 363 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 LY9Q9HBG7 655 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 ATAD3AQ9NVI7 634 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 RRN3Q9NYV6 651 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 STX18Q9P2W9 335 aaKnown RBP6.17□□□□□ -1.42
HDAC9-203ENST00000406072 ZNF212Q9UDV6 495 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 CARD8Q9Y2G2 431 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 NEDD4P46934 1319 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 hCG_1984214I3L0E3 225 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 NFKBIEO00221 500 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 TTLL1O95922 423 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 FCER1AP12319 257 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 PRDX5P30044 214 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 CIITAP33076 1130 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 HDAC4P56524 1084 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 ADRM1Q16186 407 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 ZC3H12AQ5D1E8 599 aaKnown RBP6.17□□□□□ -1.42
HDAC9-203ENST00000406072 CDKAL1Q5VV42 579 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 ARL6IP4Q66PJ3 421 aaKnown RBP6.17□□□□□ -1.42
HDAC9-203ENST00000406072 THOC7Q6I9Y2 204 aaKnown RBP6.17□□□□□ -1.42
HDAC9-203ENST00000406072 NSMFQ6X4W1 530 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 RBM44Q6ZP01 1051 aaKnown RBP6.17□□□□□ -1.42
HDAC9-203ENST00000406072 RINLQ6ZS11 566 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 DPH6Q7L8W6 267 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 NEK8Q86SG6 692 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 CDR2LQ86X02 465 aaPredicted RBP6.17□□□□□ -1.42
HDAC9-203ENST00000406072 GLYCTKQ8IVS8 523 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 AFAP1L2Q8N4X5 818 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 ZNF713Q8N859 430 aaPredicted RBP6.17□□□□□ -1.42
HDAC9-203ENST00000406072 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.17□□□□□ -1.42
HDAC9-203ENST00000406072 ZFAND2BQ8WV99 257 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 CENPTQ96BT3 561 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 DGCR14Q96DF8 476 aaKnown RBP6.17□□□□□ -1.42
HDAC9-203ENST00000406072 ZSCAN10Q96SZ4 725 aaPredicted RBP6.17□□□□□ -1.42
HDAC9-203ENST00000406072 SHCBP1LQ9BZQ2 653 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 KIAA1683Q9H0B3 1180 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 BRD8Q9H0E9 1235 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 PIDD1Q9HB75 910 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 ADA2Q9NZK5 511 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 LMCD1Q9NZU5 365 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 SEPT3Q9UH03 358 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 JAG2Q9Y219 1238 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 TDRKHQ9Y2W6 561 aaKnown RBP6.17□□□□□ -1.42
HDAC9-203ENST00000406072 C1orf232A0A0U1RR37 186 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 PP2D1A8MPX8 630 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 TAF4O00268 1085 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 CLIC2O15247 247 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 SNHG28P0DPA3 235 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 ACTN1P12814 892 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 ITGA4P13612 1032 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 HMOX2P30519 316 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 TUFMP49411 452 aaKnown RBP6.16□□□□□ -1.42
HDAC9-203ENST00000406072 NAA20P61599 178 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 IL1RL1Q01638 556 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 KRT17Q04695 432 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 KCNH2Q12809 1159 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 STK4Q13043 487 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 MTA1Q13330 715 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 PTPAQ15257 358 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 GSTA3Q16772 222 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 SPDYE2Q495Y8 402 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 WDR44Q5JSH3 913 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 KLHDC7AQ5VTJ3 777 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 BTNL9Q6UXG8 535 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 PRPF39Q86UA1 669 aaKnown RBP6.16□□□□□ -1.42
HDAC9-203ENST00000406072 ZBED8Q8IZ13 594 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 RBM46Q8TBY0 533 aaKnown RBP6.16□□□□□ -1.42
HDAC9-203ENST00000406072 MKL1Q969V6 931 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 SNF8Q96H20 258 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 L3MBTL3Q96JM7 780 aaPredicted RBP6.16□□□□□ -1.42
HDAC9-203ENST00000406072 ACAP3Q96P50 834 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 BTBD10Q9BSF8 475 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 SLC13A1Q9BZW2 595 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 SPON1Q9HCB6 807 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.16□□□□□ -1.42
HDAC9-203ENST00000406072 PCDHA12Q9UN75 941 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 HPS5Q9UPZ3 1129 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 PLA2G6O60733 806 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 ZBED4O75132 1171 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 KRT37O76014 449 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 LINGO3P0C6S8 592 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 CHRNA5P30532 468 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 GUCY1A2P33402 732 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 RPL5P46777 297 aaKnown RBP6.16□□□□□ -1.42
HDAC9-203ENST00000406072 TRADDQ15628 312 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 FSCBQ5H9T9 825 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 MFSD14BQ5SR56 506 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 ANO7Q6IWH7 933 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 MREGQ8N565 214 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 ZBTB8BQ8NAP8 495 aaPredicted RBP6.16□□□□□ -1.42
HDAC9-203ENST00000406072 FAM13CQ8NE31 585 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 UCMAQ8WVF2 138 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 CAPSLQ8WWF8 208 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 INPP5DQ92835 1189 aa6.16□□□□□ -1.42
HDAC9-203ENST00000406072 HPS3Q969F9 1004 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms