RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 TMCO4Q5TGY1 634 aa7.78□□□□□ -1.16
HDAC9-202ENST00000405010 MARK2Q7KZI7 788 aaKnown RBP7.78□□□□□ -1.16
HDAC9-202ENST00000405010 FBXO33Q7Z6M2 555 aa7.78□□□□□ -1.16
HDAC9-202ENST00000405010 CCNJLQ8IV13 435 aa7.78□□□□□ -1.16
HDAC9-202ENST00000405010 AFAP1L2Q8N4X5 818 aa7.78□□□□□ -1.16
HDAC9-202ENST00000405010 ZNF513Q8N8E2 541 aaPredicted RBP7.78□□□□□ -1.16
HDAC9-202ENST00000405010 CHURC1Q8WUH1 139 aa7.78□□□□□ -1.16
HDAC9-202ENST00000405010 KCNK16Q96T55 309 aa7.78□□□□□ -1.16
HDAC9-202ENST00000405010 CLIC5Q9NZA1 410 aa7.78□□□□□ -1.16
HDAC9-202ENST00000405010 ATXN10Q9UBB4 475 aa7.78□□□□□ -1.16
HDAC9-202ENST00000405010 COMMD3-BMI1R4GMX3 469 aa7.78□□□□□ -1.16
HDAC9-202ENST00000405010 RPTORQ8N122 1335 aa7.78□□□□□ -1.16
HDAC9-202ENST00000405010 NKRFO15226 690 aaKnown RBP eCLIP7.77□□□□□ -1.16
HDAC9-202ENST00000405010 SORBS3O60504 671 aa7.77□□□□□ -1.16
HDAC9-202ENST00000405010 EDF1O60869 148 aaKnown RBP7.77□□□□□ -1.16
HDAC9-202ENST00000405010 ZBED1O96006 694 aa7.77□□□□□ -1.16
HDAC9-202ENST00000405010 SAT1P21673 171 aa7.77□□□□□ -1.16
HDAC9-202ENST00000405010 BGNP21810 368 aa7.77□□□□□ -1.16
HDAC9-202ENST00000405010 ATP2B4P23634 1241 aa7.77□□□□□ -1.16
HDAC9-202ENST00000405010 EVX2Q03828 476 aa7.77□□□□□ -1.16
HDAC9-202ENST00000405010 SYCP2LQ5T4T6 812 aa7.77□□□□□ -1.16
HDAC9-202ENST00000405010 FOXR2Q6PJQ5 311 aa7.77□□□□□ -1.16
HDAC9-202ENST00000405010 C4orf50Q6ZRC1 276 aa7.77□□□□□ -1.16
HDAC9-202ENST00000405010 HAUS6Q7Z4H7 955 aa7.77□□□□□ -1.16
HDAC9-202ENST00000405010 RCOR2Q8IZ40 523 aa7.77□□□□□ -1.16
HDAC9-202ENST00000405010 LRRC43Q8N309 656 aa7.77□□□□□ -1.16
HDAC9-202ENST00000405010 GALNT4Q8N4A0 578 aa7.77□□□□□ -1.16
HDAC9-202ENST00000405010 CATSPER1Q8NEC5 780 aa7.77□□□□□ -1.16
HDAC9-202ENST00000405010 DEPTORQ8TB45 409 aa7.77□□□□□ -1.16
HDAC9-202ENST00000405010 UCMAQ8WVF2 138 aa7.77□□□□□ -1.16
HDAC9-202ENST00000405010 SPOCK2Q92563 424 aa7.77□□□□□ -1.16
HDAC9-202ENST00000405010 THAP11Q96EK4 314 aa7.77□□□□□ -1.16
HDAC9-202ENST00000405010 SCYL1Q96KG9 808 aa7.77□□□□□ -1.16
HDAC9-202ENST00000405010 DCLK3Q9C098 648 aa7.77□□□□□ -1.16
HDAC9-202ENST00000405010 CCDC134Q9H6E4 229 aa7.77□□□□□ -1.16
HDAC9-202ENST00000405010 HSPBP1Q9NZL4 362 aa7.77□□□□□ -1.16
HDAC9-202ENST00000405010 NKX1-2Q9UD57 310 aaPredicted RBP7.77□□□□□ -1.16
HDAC9-202ENST00000405010 GIPC1O14908 333 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 TBX3O15119 743 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 DDX3YO15523 660 aaKnown RBP7.77□□□□□ -1.17
HDAC9-202ENST00000405010 PEX11AO75192 247 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 LINGO3P0C6S8 592 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 VCAM1P19320 739 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 CHI3L2Q15782 390 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 CCNG2Q16589 344 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 ZNF394Q53GI3 561 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 ACAD10Q6JQN1 1059 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 IYDQ6PHW0 289 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 ENOSF1Q7L5Y1 443 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 LZICQ8WZA0 190 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 NR1H4Q96RI1 486 aaPredicted RBP7.77□□□□□ -1.17
HDAC9-202ENST00000405010 PAFAH2Q99487 392 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 LXNQ9BS40 222 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 KLHL4Q9C0H6 718 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 DRC3Q9H069 523 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 ZDHHC18Q9NUE0 388 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 PPP1R1BQ9UD71 204 aaPredicted RBP7.77□□□□□ -1.17
HDAC9-202ENST00000405010 KCNG1Q9UIX4 513 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 PIK3CDO00329 1044 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 C2CD2LO14523 706 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 ADAMTS3O15072 1205 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 STRNO43815 780 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 GPC4O75487 556 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 KLHL2O95198 593 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 PYGLP06737 847 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 WEE2P0C1S8 567 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 KRT10P13645 584 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 GNA15P30679 374 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 COPAP53621 1224 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 CDK16Q00536 496 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 AP1B1Q10567 949 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 NFX1Q12986 1120 aaKnown RBP7.77□□□□□ -1.17
HDAC9-202ENST00000405010 PTK6Q13882 451 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 ABCB5Q2M3G0 1257 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 KHDC1Q4VXA5 237 aaKnown RBP7.77□□□□□ -1.17
HDAC9-202ENST00000405010 EFHC1Q5JVL4 640 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 C16orf86Q6ZW13 317 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 NLRX1Q86UT6 975 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 KLHL23Q8NBE8 558 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 TMEM35BQ8NCS4 154 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 RBM17Q96I25 401 aaKnown RBP7.77□□□□□ -1.17
HDAC9-202ENST00000405010 CCT7Q99832 543 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 SIKE1Q9BRV8 207 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 FGFBP2Q9BYJ0 223 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 TRPV6Q9H1D0 765 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 TAGLN3Q9UI15 199 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 MYH6P13533 1939 aa7.77□□□□□ -1.17
HDAC9-202ENST00000405010 TESPA1A2RU30 521 aaPredicted RBP7.76□□□□□ -1.17
HDAC9-202ENST00000405010 TRIM49D1C9J1S8 452 aa7.76□□□□□ -1.17
HDAC9-202ENST00000405010 MCF2P10911 925 aa7.76□□□□□ -1.17
HDAC9-202ENST00000405010 ACVR2BQ13705 512 aa7.76□□□□□ -1.17
HDAC9-202ENST00000405010 MTHFD1LQ6UB35 978 aa7.76□□□□□ -1.17
HDAC9-202ENST00000405010 ZDHHC24Q6UX98 284 aa7.76□□□□□ -1.17
HDAC9-202ENST00000405010 TRIM72Q6ZMU5 477 aa7.76□□□□□ -1.17
HDAC9-202ENST00000405010 OTOAQ7RTW8 1153 aa7.76□□□□□ -1.17
HDAC9-202ENST00000405010 CLNKQ7Z7G1 428 aa7.76□□□□□ -1.17
HDAC9-202ENST00000405010 SLFN11Q7Z7L1 901 aa7.76□□□□□ -1.17
HDAC9-202ENST00000405010 HSPH1Q92598 858 aa7.76□□□□□ -1.17
HDAC9-202ENST00000405010 SHISA4Q96DD7 197 aa7.76□□□□□ -1.17
HDAC9-202ENST00000405010 OXNAD1Q96HP4 312 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms