RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 STRN3Q13033 797 aa21.05■□□□□ 0.96
CCDC47-202ENST00000403162 KLF1Q13351 362 aaPredicted RBP21.05■□□□□ 0.96
CCDC47-202ENST00000403162 STAT4Q14765 748 aa21.05■□□□□ 0.96
CCDC47-202ENST00000403162 CGB2Q6NT52 195 aa21.05■□□□□ 0.96
CCDC47-202ENST00000403162 FASTKD5Q7L8L6 764 aaKnown RBP21.05■□□□□ 0.96
CCDC47-202ENST00000403162 CYP4X1Q8N118 509 aa21.05■□□□□ 0.96
CCDC47-202ENST00000403162 DHX38Q92620 1227 aaKnown RBP21.05■□□□□ 0.96
CCDC47-202ENST00000403162 FAM212AQ96EL1 285 aa21.05■□□□□ 0.96
CCDC47-202ENST00000403162 SAAL1Q96ER3 474 aa21.05■□□□□ 0.96
CCDC47-202ENST00000403162 TRIM11Q96F44 468 aa21.05■□□□□ 0.96
CCDC47-202ENST00000403162 MFSD14AQ96MC6 490 aa21.05■□□□□ 0.96
CCDC47-202ENST00000403162 MLXIPLQ9NP71 852 aa21.05■□□□□ 0.96
CCDC47-202ENST00000403162 EURLQ9NYK6 297 aa21.05■□□□□ 0.96
CCDC47-202ENST00000403162 NKIRAS1Q9NYS0 192 aa21.05■□□□□ 0.96
CCDC47-202ENST00000403162 TBX20Q9UMR3 447 aa21.05■□□□□ 0.96
CCDC47-202ENST00000403162 ANP32DO95626 131 aa21.04■□□□□ 0.96
CCDC47-202ENST00000403162 CETPP11597 493 aa21.04■□□□□ 0.96
CCDC47-202ENST00000403162 CCNB1P14635 433 aa21.04■□□□□ 0.96
CCDC47-202ENST00000403162 CLNS1AP54105 237 aaKnown RBP21.04■□□□□ 0.96
CCDC47-202ENST00000403162 GCNT1Q02742 428 aa21.04■□□□□ 0.96
CCDC47-202ENST00000403162 MTFR1Q15390 333 aa21.04■□□□□ 0.96
CCDC47-202ENST00000403162 TRIP13Q15645 432 aaPredicted RBP21.04■□□□□ 0.96
CCDC47-202ENST00000403162 FBXL18Q96ME1 805 aa21.04■□□□□ 0.96
CCDC47-202ENST00000403162 AGBL1Q96MI9 1066 aa21.04■□□□□ 0.96
CCDC47-202ENST00000403162 RAVER2Q9HCJ3 691 aaKnown RBP21.04■□□□□ 0.96
CCDC47-202ENST00000403162 GPRC5CQ9NQ84 441 aa21.04■□□□□ 0.96
CCDC47-202ENST00000403162 DNAJC17Q9NVM6 304 aaKnown RBP21.04■□□□□ 0.96
CCDC47-202ENST00000403162 NOP53Q9NZM5 478 aaKnown RBP21.04■□□□□ 0.96
CCDC47-202ENST00000403162 CCPG1Q9ULG6 757 aa21.04■□□□□ 0.96
CCDC47-202ENST00000403162 NAALADL1Q9UQQ1 740 aa21.04■□□□□ 0.96
CCDC47-202ENST00000403162 FOXO6A8MYZ6 492 aa21.04■□□□□ 0.96
CCDC47-202ENST00000403162 ICAM1P05362 532 aa21.04■□□□□ 0.96
CCDC47-202ENST00000403162 KRT16P08779 473 aa21.04■□□□□ 0.96
CCDC47-202ENST00000403162 CCND1P24385 295 aa21.04■□□□□ 0.96
CCDC47-202ENST00000403162 MYO1EQ12965 1108 aa21.04■□□□□ 0.96
CCDC47-202ENST00000403162 TKFCQ3LXA3 575 aa21.04■□□□□ 0.96
CCDC47-202ENST00000403162 C4orf19Q8IY42 314 aa21.04■□□□□ 0.96
CCDC47-202ENST00000403162 RIBC1Q8N443 379 aaPredicted RBP21.04■□□□□ 0.96
CCDC47-202ENST00000403162 MAB21L3Q8N8X9 362 aa21.04■□□□□ 0.96
CCDC47-202ENST00000403162 TMEM161BQ8NDZ6 487 aa21.04■□□□□ 0.96
CCDC47-202ENST00000403162 NSMCE1Q8WV22 266 aa21.04■□□□□ 0.96
CCDC47-202ENST00000403162 CCDC77Q9BR77 488 aa21.04■□□□□ 0.96
CCDC47-202ENST00000403162 TRIM7Q9C029 511 aa21.04■□□□□ 0.96
CCDC47-202ENST00000403162 HOXC10Q9NYD6 342 aa21.04■□□□□ 0.96
CCDC47-202ENST00000403162 KLHL14Q9P2G3 628 aa21.04■□□□□ 0.96
CCDC47-202ENST00000403162 AGTPBP1Q9UPW5 1226 aa21.04■□□□□ 0.96
CCDC47-202ENST00000403162 R3HDM2Q9Y2K5 976 aaKnown RBP21.04■□□□□ 0.96
CCDC47-202ENST00000403162 L3MBTL1Q9Y468 752 aa21.04■□□□□ 0.96
CCDC47-202ENST00000403162 UBIAD1Q9Y5Z9 338 aa21.04■□□□□ 0.96
CCDC47-202ENST00000403162 LOC285556D6RIA3 1793 aa21.04■□□□□ 0.96
CCDC47-202ENST00000403162 FDX1P10109 184 aa21.03■□□□□ 0.96
CCDC47-202ENST00000403162 CNGA1P29973 690 aa21.03■□□□□ 0.96
CCDC47-202ENST00000403162 ENPEPQ07075 957 aa21.03■□□□□ 0.96
CCDC47-202ENST00000403162 MOGSQ13724 837 aa21.03■□□□□ 0.96
CCDC47-202ENST00000403162 ZKSCAN8Q15776 578 aaPredicted RBP21.03■□□□□ 0.96
CCDC47-202ENST00000403162 CCNG2Q16589 344 aa21.03■□□□□ 0.96
CCDC47-202ENST00000403162 USP37Q86T82 979 aa21.03■□□□□ 0.96
CCDC47-202ENST00000403162 ZNF677Q86XU0 584 aa21.03■□□□□ 0.96
CCDC47-202ENST00000403162 CCDC89Q8N998 374 aa21.03■□□□□ 0.96
CCDC47-202ENST00000403162 IL31RAQ8NI17 732 aa21.03■□□□□ 0.96
CCDC47-202ENST00000403162 RMDN2Q96LZ7 410 aa21.03■□□□□ 0.96
CCDC47-202ENST00000403162 TOPORSQ9NS56 1045 aaPredicted RBP21.03■□□□□ 0.96
CCDC47-202ENST00000403162 COL20A1Q9P218 1284 aa21.03■□□□□ 0.96
CCDC47-202ENST00000403162 PNMA3Q9UL41 463 aa21.03■□□□□ 0.96
CCDC47-202ENST00000403162 ZC3H11AO75152 810 aaKnown RBP eCLIP21.03■□□□□ 0.96
CCDC47-202ENST00000403162 ABHD2P08910 425 aa21.03■□□□□ 0.96
CCDC47-202ENST00000403162 KRT5P13647 590 aa21.03■□□□□ 0.96
CCDC47-202ENST00000403162 YY1P25490 414 aa21.03■□□□□ 0.96
CCDC47-202ENST00000403162 SPRYD7Q5W111 196 aa21.03■□□□□ 0.96
CCDC47-202ENST00000403162 SRRM1Q8IYB3 904 aaKnown RBP21.03■□□□□ 0.96
CCDC47-202ENST00000403162 FOXP3Q9BZS1 431 aa21.03■□□□□ 0.96
CCDC47-202ENST00000403162 MYPNQ86TC9 1320 aa21.02■□□□□ 0.96
CCDC47-202ENST00000403162 PARP14Q460N5 1801 aa21.02■□□□□ 0.96
CCDC47-202ENST00000403162 SPDYE16A6NNV3 312 aaPredicted RBP21.02■□□□□ 0.96
CCDC47-202ENST00000403162 TOMM70O94826 608 aa21.02■□□□□ 0.96
CCDC47-202ENST00000403162 RPSAP08865 295 aaKnown RBP21.02■□□□□ 0.96
CCDC47-202ENST00000403162 TAC1P20366 129 aa21.02■□□□□ 0.96
CCDC47-202ENST00000403162 RRM1P23921 792 aa21.02■□□□□ 0.96
CCDC47-202ENST00000403162 MSH2P43246 934 aa21.02■□□□□ 0.96
CCDC47-202ENST00000403162 GTF2A2P52657 109 aa21.02■□□□□ 0.96
CCDC47-202ENST00000403162 CYP24A1Q07973 514 aa21.02■□□□□ 0.96
CCDC47-202ENST00000403162 MGAT5Q09328 741 aa21.02■□□□□ 0.96
CCDC47-202ENST00000403162 CEP128Q6ZU80 1094 aa21.02■□□□□ 0.96
CCDC47-202ENST00000403162 SV2AQ7L0J3 742 aa21.02■□□□□ 0.96
CCDC47-202ENST00000403162 ANKRD35Q8N283 1001 aa21.02■□□□□ 0.96
CCDC47-202ENST00000403162 MOV10L1Q9BXT6 1211 aaKnown RBP21.02■□□□□ 0.96
CCDC47-202ENST00000403162 TBC1D22BQ9NU19 505 aa21.02■□□□□ 0.96
CCDC47-202ENST00000403162 CEP83Q9Y592 693 aa21.02■□□□□ 0.96
CCDC47-202ENST00000403162 TMEM150BA6NC51 233 aa21.02■□□□□ 0.95
CCDC47-202ENST00000403162 PSTPIP1O43586 416 aa21.02■□□□□ 0.95
CCDC47-202ENST00000403162 PROSCO94903 275 aa21.02■□□□□ 0.95
CCDC47-202ENST00000403162 UGCGQ16739 394 aa21.02■□□□□ 0.95
CCDC47-202ENST00000403162 TMEM63BQ5T3F8 832 aa21.02■□□□□ 0.95
CCDC47-202ENST00000403162 FAM102BQ5T8I3 360 aa21.02■□□□□ 0.95
CCDC47-202ENST00000403162 PCNX4Q63HM2 1172 aa21.02■□□□□ 0.95
CCDC47-202ENST00000403162 ZNF365Q70YC5 407 aa21.02■□□□□ 0.95
CCDC47-202ENST00000403162 PWWP2AQ96N64 755 aa21.02■□□□□ 0.95
CCDC47-202ENST00000403162 SH2D3AQ9BRG2 576 aa21.02■□□□□ 0.95
CCDC47-202ENST00000403162 TBK1Q9UHD2 729 aa21.02■□□□□ 0.95
CCDC47-202ENST00000403162 ADAMTS5Q9UNA0 930 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms