RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 NFIL3Q16649 462 aa20.75■□□□□ 0.91
RTN4-207ENST00000402434 ZNF658Q5TYW1 1059 aaPredicted RBP20.75■□□□□ 0.91
RTN4-207ENST00000402434 WDR49Q8IV35 697 aa20.75■□□□□ 0.91
RTN4-207ENST00000402434 BORCS6Q96GS4 357 aa20.75■□□□□ 0.91
RTN4-207ENST00000402434 SENP8Q96LD8 212 aa20.75■□□□□ 0.91
RTN4-207ENST00000402434 SFXN1Q9H9B4 322 aa20.75■□□□□ 0.91
RTN4-207ENST00000402434 MAN1C1Q9NR34 630 aa20.75■□□□□ 0.91
RTN4-207ENST00000402434 PRKAG3Q9UGI9 489 aa20.75■□□□□ 0.91
RTN4-207ENST00000402434 ITGA11Q9UKX5 1188 aa20.75■□□□□ 0.91
RTN4-207ENST00000402434 CDY1Q9Y6F8 540 aa20.75■□□□□ 0.91
RTN4-207ENST00000402434 PTPRJQ12913 1337 aa20.74■□□□□ 0.91
RTN4-207ENST00000402434 PLXNA3P51805 1871 aa20.74■□□□□ 0.91
RTN4-207ENST00000402434 NR3C1P04150 777 aa20.74■□□□□ 0.91
RTN4-207ENST00000402434 TYMPP19971 482 aa20.74■□□□□ 0.91
RTN4-207ENST00000402434 DUOXA2Q1HG44 320 aa20.74■□□□□ 0.91
RTN4-207ENST00000402434 SMYD4Q8IYR2 804 aaPredicted RBP20.74■□□□□ 0.91
RTN4-207ENST00000402434 C12orf76Q8N812 135 aaPredicted RBP20.74■□□□□ 0.91
RTN4-207ENST00000402434 UHRF1Q96T88 793 aaPredicted RBP20.74■□□□□ 0.91
RTN4-207ENST00000402434 MTMR12Q9C0I1 747 aa20.74■□□□□ 0.91
RTN4-207ENST00000402434 GZF1Q9H116 711 aaPredicted RBP20.74■□□□□ 0.91
RTN4-207ENST00000402434 SIX4Q9UIU6 781 aa20.74■□□□□ 0.91
RTN4-207ENST00000402434 MTCL1Q9Y4B5 1905 aaKnown RBP20.74■□□□□ 0.91
RTN4-207ENST00000402434 CALUO43852 315 aaPredicted RBP20.73■□□□□ 0.91
RTN4-207ENST00000402434 ITGB3P05106 788 aa20.73■□□□□ 0.91
RTN4-207ENST00000402434 TMEM191BP0C7N4 346 aa20.73■□□□□ 0.91
RTN4-207ENST00000402434 SPATA31D3P0C874 917 aa20.73■□□□□ 0.91
RTN4-207ENST00000402434 PNPLA4P41247 253 aa20.73■□□□□ 0.91
RTN4-207ENST00000402434 PRCPP42785 496 aa20.73■□□□□ 0.91
RTN4-207ENST00000402434 TAF6P49848 677 aa20.73■□□□□ 0.91
RTN4-207ENST00000402434 ZCWPW2Q504Y3 356 aa20.73■□□□□ 0.91
RTN4-207ENST00000402434 CES5AQ6NT32 575 aa20.73■□□□□ 0.91
RTN4-207ENST00000402434 ELMSAN1Q6PJG2 1045 aa20.73■□□□□ 0.91
RTN4-207ENST00000402434 DSTYKQ6XUX3 929 aa20.73■□□□□ 0.91
RTN4-207ENST00000402434 SPATA31D4Q6ZUB0 917 aa20.73■□□□□ 0.91
RTN4-207ENST00000402434 CSGALNACT2Q8N6G5 542 aa20.73■□□□□ 0.91
RTN4-207ENST00000402434 LRRC52Q8N7C0 313 aa20.73■□□□□ 0.91
RTN4-207ENST00000402434 KREMEN2Q8NCW0 462 aa20.73■□□□□ 0.91
RTN4-207ENST00000402434 CMASQ8NFW8 434 aaPredicted RBP20.73■□□□□ 0.91
RTN4-207ENST00000402434 OR5B17Q8NGF7 314 aa20.73■□□□□ 0.91
RTN4-207ENST00000402434 ANKRD36BP1Q96IX9 119 aa20.73■□□□□ 0.91
RTN4-207ENST00000402434 FAM84AQ96KN4 292 aa20.73■□□□□ 0.91
RTN4-207ENST00000402434 NECAB3Q96P71 396 aaPredicted RBP20.73■□□□□ 0.91
RTN4-207ENST00000402434 APOL5Q9BWW9 433 aa20.73■□□□□ 0.91
RTN4-207ENST00000402434 FBXL5Q9UKA1 691 aa20.73■□□□□ 0.91
RTN4-207ENST00000402434 C5orf42Q9H799 3197 aa20.73■□□□□ 0.91
RTN4-207ENST00000402434 TULP1O00294 542 aaPredicted RBP20.72■□□□□ 0.91
RTN4-207ENST00000402434 POLR2BP30876 1174 aaKnown RBP20.72■□□□□ 0.91
RTN4-207ENST00000402434 CLDN10P78369 228 aa20.72■□□□□ 0.91
RTN4-207ENST00000402434 YWHAHQ04917 246 aaPredicted RBP20.72■□□□□ 0.91
RTN4-207ENST00000402434 CBX2Q14781 532 aaPredicted RBP20.72■□□□□ 0.91
RTN4-207ENST00000402434 CTXN3Q4LDR2 81 aa20.72■□□□□ 0.91
RTN4-207ENST00000402434 RARS2Q5T160 578 aaKnown RBP20.72■□□□□ 0.91
RTN4-207ENST00000402434 LMBRD2Q68DH5 695 aaPredicted RBP20.72■□□□□ 0.91
RTN4-207ENST00000402434 SCARA3Q6AZY7 606 aa20.72■□□□□ 0.91
RTN4-207ENST00000402434 ZNF280DQ6N043 979 aa20.72■□□□□ 0.91
RTN4-207ENST00000402434 C15orf39Q6ZRI6 1047 aa20.72■□□□□ 0.91
RTN4-207ENST00000402434 ADHFE1Q8IWW8 467 aa20.72■□□□□ 0.91
RTN4-207ENST00000402434 ZNF461Q8TAF7 563 aa20.72■□□□□ 0.91
RTN4-207ENST00000402434 CCDC127Q96BQ5 260 aa20.72■□□□□ 0.91
RTN4-207ENST00000402434 FNBP1Q96RU3 617 aa20.72■□□□□ 0.91
RTN4-207ENST00000402434 CGRRF1Q99675 332 aa20.72■□□□□ 0.91
RTN4-207ENST00000402434 OXCT2Q9BYC2 517 aaPredicted RBP20.72■□□□□ 0.91
RTN4-207ENST00000402434 RHOBTB2Q9BYZ6 727 aa20.72■□□□□ 0.91
RTN4-207ENST00000402434 FBXW11Q9UKB1 542 aa20.72■□□□□ 0.91
RTN4-207ENST00000402434 AGAP1Q9UPQ3 857 aa20.72■□□□□ 0.91
RTN4-207ENST00000402434 TIMM13Q9Y5L4 95 aaPredicted RBP20.72■□□□□ 0.91
RTN4-207ENST00000402434 BDP1A6H8Y1 2624 aa20.72■□□□□ 0.91
RTN4-207ENST00000402434 ARHGEF37A1IGU5 675 aa20.71■□□□□ 0.91
RTN4-207ENST00000402434 KPNA7A9QM74 516 aa20.71■□□□□ 0.91
RTN4-207ENST00000402434 ABLIM3O94929 683 aa20.71■□□□□ 0.91
RTN4-207ENST00000402434 CYP11A1P05108 521 aa20.71■□□□□ 0.91
RTN4-207ENST00000402434 DLATP10515 647 aaKnown RBP20.71■□□□□ 0.91
RTN4-207ENST00000402434 ODC1P11926 461 aa20.71■□□□□ 0.91
RTN4-207ENST00000402434 CASP4P49662 377 aa20.71■□□□□ 0.91
RTN4-207ENST00000402434 RBP5P82980 135 aa20.71■□□□□ 0.91
RTN4-207ENST00000402434 EDRF1Q3B7T1 1238 aa20.71■□□□□ 0.91
RTN4-207ENST00000402434 SV2CQ496J9 727 aa20.71■□□□□ 0.91
RTN4-207ENST00000402434 TMC5Q6UXY8 1006 aa20.71■□□□□ 0.91
RTN4-207ENST00000402434 CYP26C1Q6V0L0 522 aa20.71■□□□□ 0.91
RTN4-207ENST00000402434 GPR149Q86SP6 731 aa20.71■□□□□ 0.91
RTN4-207ENST00000402434 USP37Q86T82 979 aa20.71■□□□□ 0.91
RTN4-207ENST00000402434 PLEKHO2Q8TD55 490 aa20.71■□□□□ 0.91
RTN4-207ENST00000402434 PARD3BQ8TEW8 1205 aa20.71■□□□□ 0.91
RTN4-207ENST00000402434 ZNF560Q96MR9 790 aa20.71■□□□□ 0.91
RTN4-207ENST00000402434 POP1Q99575 1024 aaKnown RBP20.71■□□□□ 0.91
RTN4-207ENST00000402434 MAPK13O15264 365 aa20.7■□□□□ 0.9
RTN4-207ENST00000402434 TNNC2P02585 160 aa20.7■□□□□ 0.9
RTN4-207ENST00000402434 TNNI1P19237 187 aa20.7■□□□□ 0.9
RTN4-207ENST00000402434 NR2F2P24468 414 aa20.7■□□□□ 0.9
RTN4-207ENST00000402434 RPL13P26373 211 aaKnown RBP20.7■□□□□ 0.9
RTN4-207ENST00000402434 ROR1Q01973 937 aa20.7■□□□□ 0.9
RTN4-207ENST00000402434 ZP2Q05996 745 aa20.7■□□□□ 0.9
RTN4-207ENST00000402434 ATAT1Q5SQI0 421 aa20.7■□□□□ 0.9
RTN4-207ENST00000402434 CENPPQ6IPU0 288 aa20.7■□□□□ 0.9
RTN4-207ENST00000402434 TRAPPC11Q7Z392 1133 aa20.7■□□□□ 0.9
RTN4-207ENST00000402434 FEZF2Q8TBJ5 459 aa20.7■□□□□ 0.9
RTN4-207ENST00000402434 ZNF516Q92618 1163 aa20.7■□□□□ 0.9
RTN4-207ENST00000402434 RIPOR3Q96MK2 946 aa20.7■□□□□ 0.9
RTN4-207ENST00000402434 NECTIN4Q96NY8 510 aa20.7■□□□□ 0.9
RTN4-207ENST00000402434 PHF7Q9BWX1 381 aaPredicted RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms