RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 ARNTLO00327 626 aa13.01□□□□□ -0.33
LINC00544-201ENST00000400540 GUCY2FP51841 1108 aa13.01□□□□□ -0.33
LINC00544-201ENST00000400540 EPHA5P54756 1037 aa13.01□□□□□ -0.33
LINC00544-201ENST00000400540 SATB1Q01826 763 aa13.01□□□□□ -0.33
LINC00544-201ENST00000400540 CACNB1Q02641 598 aaPredicted RBP13.01□□□□□ -0.33
LINC00544-201ENST00000400540 GAS6Q14393 721 aa13.01□□□□□ -0.33
LINC00544-201ENST00000400540 ZRSR1Q15695 479 aaKnown RBP13.01□□□□□ -0.33
LINC00544-201ENST00000400540 STXBP5Q5T5C0 1151 aa13.01□□□□□ -0.33
LINC00544-201ENST00000400540 KRT79Q5XKE5 535 aa13.01□□□□□ -0.33
LINC00544-201ENST00000400540 IQCEQ6IPM2 695 aa13.01□□□□□ -0.33
LINC00544-201ENST00000400540 GPIHBP1Q8IV16 184 aa13.01□□□□□ -0.33
LINC00544-201ENST00000400540 ELMOD1Q8N336 334 aa13.01□□□□□ -0.33
LINC00544-201ENST00000400540 TMEM161BQ8NDZ6 487 aa13.01□□□□□ -0.33
LINC00544-201ENST00000400540 BORCS6Q96GS4 357 aa13.01□□□□□ -0.33
LINC00544-201ENST00000400540 PNMA5Q96PV4 448 aa13.01□□□□□ -0.33
LINC00544-201ENST00000400540 DNAJC25Q9H1X3 360 aa13.01□□□□□ -0.33
LINC00544-201ENST00000400540 LMAN1LQ9HAT1 526 aa13.01□□□□□ -0.33
LINC00544-201ENST00000400540 ASAH2Q9NR71 780 aa13.01□□□□□ -0.33
LINC00544-201ENST00000400540 DAXXQ9UER7 740 aaPredicted RBP13.01□□□□□ -0.33
LINC00544-201ENST00000400540 ATG2BQ96BY7 2078 aa13□□□□□ -0.33
LINC00544-201ENST00000400540 NPHP3-ACAD11A0A0J9YXS1 232 aa13□□□□□ -0.33
LINC00544-201ENST00000400540 A0A1W2PRU2 124 aa13□□□□□ -0.33
LINC00544-201ENST00000400540 HEPACAM2A8MVW5 462 aa13□□□□□ -0.33
LINC00544-201ENST00000400540 M0QZQ0 153 aa13□□□□□ -0.33
LINC00544-201ENST00000400540 MAN2B1O00754 1011 aa13□□□□□ -0.33
LINC00544-201ENST00000400540 TOM1L1O75674 476 aa13□□□□□ -0.33
LINC00544-201ENST00000400540 MAPTP10636 758 aaKnown RBP13□□□□□ -0.33
LINC00544-201ENST00000400540 CCNE1P24864 410 aa13□□□□□ -0.33
LINC00544-201ENST00000400540 U2AF2P26368 475 aaKnown RBP eCLIP13□□□□□ -0.33
LINC00544-201ENST00000400540 HOXC13P31276 330 aa13□□□□□ -0.33
LINC00544-201ENST00000400540 TNFSF9P41273 254 aa13□□□□□ -0.33
LINC00544-201ENST00000400540 SOX9P48436 509 aa13□□□□□ -0.33
LINC00544-201ENST00000400540 DMWDQ09019 674 aa13□□□□□ -0.33
LINC00544-201ENST00000400540 STRN3Q13033 797 aa13□□□□□ -0.33
LINC00544-201ENST00000400540 WDR44Q5JSH3 913 aa13□□□□□ -0.33
LINC00544-201ENST00000400540 TMC8Q8IU68 726 aa13□□□□□ -0.33
LINC00544-201ENST00000400540 FAM184AQ8NB25 1140 aa13□□□□□ -0.33
LINC00544-201ENST00000400540 APPL2Q8NEU8 664 aa13□□□□□ -0.33
LINC00544-201ENST00000400540 BEST2Q8NFU1 509 aa13□□□□□ -0.33
LINC00544-201ENST00000400540 DEPDC1BQ8WUY9 529 aa13□□□□□ -0.33
LINC00544-201ENST00000400540 SECISBP2LQ93073 1101 aaKnown RBP13□□□□□ -0.33
LINC00544-201ENST00000400540 CNTNAP3BQ96NU0 1288 aa13□□□□□ -0.33
LINC00544-201ENST00000400540 PLIN2Q99541 437 aa13□□□□□ -0.33
LINC00544-201ENST00000400540 LRRC3Q9BY71 257 aa13□□□□□ -0.33
LINC00544-201ENST00000400540 CNTNAP3Q9BZ76 1288 aa13□□□□□ -0.33
LINC00544-201ENST00000400540 RAB34Q9BZG1 259 aa13□□□□□ -0.33
LINC00544-201ENST00000400540 SLITRK6Q9H5Y7 841 aa13□□□□□ -0.33
LINC00544-201ENST00000400540 RBM12Q9NTZ6 932 aaKnown RBP13□□□□□ -0.33
LINC00544-201ENST00000400540 RBM19Q9Y4C8 960 aaKnown RBP13□□□□□ -0.33
LINC00544-201ENST00000400540 EPG5Q9HCE0 2579 aa13□□□□□ -0.33
LINC00544-201ENST00000400540 SPAG17Q6Q759 2223 aa13□□□□□ -0.33
LINC00544-201ENST00000400540 DCDC2BA2VCK2 349 aa12.99□□□□□ -0.33
LINC00544-201ENST00000400540 SLC38A8A6NNN8 435 aa12.99□□□□□ -0.33
LINC00544-201ENST00000400540 PPEF2O14830 753 aa12.99□□□□□ -0.33
LINC00544-201ENST00000400540 ZNF263O14978 683 aa12.99□□□□□ -0.33
LINC00544-201ENST00000400540 SOAT2O75908 522 aa12.99□□□□□ -0.33
LINC00544-201ENST00000400540 CHRNB1P11230 501 aa12.99□□□□□ -0.33
LINC00544-201ENST00000400540 PLS3P13797 630 aa12.99□□□□□ -0.33
LINC00544-201ENST00000400540 GUCY2CP25092 1073 aa12.99□□□□□ -0.33
LINC00544-201ENST00000400540 MATR3P43243 847 aaKnown RBP eCLIP12.99□□□□□ -0.33
LINC00544-201ENST00000400540 CDR1P51861 262 aa12.99□□□□□ -0.33
LINC00544-201ENST00000400540 HMGN5P82970 282 aaKnown RBP12.99□□□□□ -0.33
LINC00544-201ENST00000400540 LMNB2Q03252 620 aa12.99□□□□□ -0.33
LINC00544-201ENST00000400540 YWHAHQ04917 246 aaPredicted RBP12.99□□□□□ -0.33
LINC00544-201ENST00000400540 MCL1Q07820 350 aa12.99□□□□□ -0.33
LINC00544-201ENST00000400540 SPEM2Q0P670 501 aa12.99□□□□□ -0.33
LINC00544-201ENST00000400540 SRSF5Q13243 272 aaKnown RBP12.99□□□□□ -0.33
LINC00544-201ENST00000400540 Q6ZS52 159 aa12.99□□□□□ -0.33
LINC00544-201ENST00000400540 MFSD6LQ8IWD5 586 aa12.99□□□□□ -0.33
LINC00544-201ENST00000400540 TTC9BQ8N6N2 239 aa12.99□□□□□ -0.33
LINC00544-201ENST00000400540 GPR161Q8N6U8 529 aaKnown RBP12.99□□□□□ -0.33
LINC00544-201ENST00000400540 TTC8Q8TAM2 541 aa12.99□□□□□ -0.33
LINC00544-201ENST00000400540 KIF12Q96FN5 646 aa12.99□□□□□ -0.33
LINC00544-201ENST00000400540 TMEM209Q96SK2 561 aa12.99□□□□□ -0.33
LINC00544-201ENST00000400540 NTPCRQ9BSD7 190 aaKnown RBP12.99□□□□□ -0.33
LINC00544-201ENST00000400540 FAM126AQ9BYI3 521 aaPredicted RBP12.99□□□□□ -0.33
LINC00544-201ENST00000400540 C17orf75Q9HAS0 396 aa12.99□□□□□ -0.33
LINC00544-201ENST00000400540 TRPV4Q9HBA0 871 aa12.99□□□□□ -0.33
LINC00544-201ENST00000400540 TRPV5Q9NQA5 729 aa12.99□□□□□ -0.33
LINC00544-201ENST00000400540 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.99□□□□□ -0.33
LINC00544-201ENST00000400540 C2orf42Q9NWW7 574 aa12.99□□□□□ -0.33
LINC00544-201ENST00000400540 GMEB2Q9UKD1 530 aa12.99□□□□□ -0.33
LINC00544-201ENST00000400540 CDV3Q9UKY7 258 aaKnown RBP12.99□□□□□ -0.33
LINC00544-201ENST00000400540 STK24Q9Y6E0 443 aa12.99□□□□□ -0.33
LINC00544-201ENST00000400540 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.99□□□□□ -0.33
LINC00544-201ENST00000400540 TTC26A0AVF1 554 aa12.98□□□□□ -0.33
LINC00544-201ENST00000400540 CLDN3O15551 220 aa12.98□□□□□ -0.33
LINC00544-201ENST00000400540 OAZ2O95190 189 aa12.98□□□□□ -0.33
LINC00544-201ENST00000400540 MARCKSP29966 332 aaPredicted RBP12.98□□□□□ -0.33
LINC00544-201ENST00000400540 LRPAP1P30533 357 aa12.98□□□□□ -0.33
LINC00544-201ENST00000400540 PRPHP41219 470 aa12.98□□□□□ -0.33
LINC00544-201ENST00000400540 AARSP49588 968 aaKnown RBP eCLIP12.98□□□□□ -0.33
LINC00544-201ENST00000400540 CCR3P51677 355 aa12.98□□□□□ -0.33
LINC00544-201ENST00000400540 DUSP4Q13115 394 aa12.98□□□□□ -0.33
LINC00544-201ENST00000400540 TXNDC11Q6PKC3 985 aa12.98□□□□□ -0.33
LINC00544-201ENST00000400540 ZPBP2Q6X784 338 aa12.98□□□□□ -0.33
LINC00544-201ENST00000400540 DTHD1Q6ZMT9 781 aa12.98□□□□□ -0.33
LINC00544-201ENST00000400540 PRR23BQ6ZRT6 265 aa12.98□□□□□ -0.33
LINC00544-201ENST00000400540 LEMD2Q8NC56 503 aa12.98□□□□□ -0.33
LINC00544-201ENST00000400540 SPIRE2Q8WWL2 714 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms