RNA–Protein interactions for RNA: ENST00000399793.6

RETREG1-202, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best) BASIC

Gene RETREG1, Length 3,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-202ENST00000399793 SEPT6Q14141 434 aa9.2□□□□□ -0.94
RETREG1-202ENST00000399793 TRABD2AQ86V40 505 aa9.2□□□□□ -0.94
RETREG1-202ENST00000399793 CENPSQ8N2Z9 138 aa9.2□□□□□ -0.94
RETREG1-202ENST00000399793 MARVELD2Q8N4S9 558 aa9.2□□□□□ -0.94
RETREG1-202ENST00000399793 SLC43A3Q8NBI5 491 aa9.2□□□□□ -0.94
RETREG1-202ENST00000399793 RNF169Q8NCN4 708 aa9.2□□□□□ -0.94
RETREG1-202ENST00000399793 ICA1LQ8NDH6 482 aa9.2□□□□□ -0.94
RETREG1-202ENST00000399793 RBM15BQ8NDT2 890 aaKnown RBP9.2□□□□□ -0.94
RETREG1-202ENST00000399793 ZNF496Q96IT1 587 aaPredicted RBP9.2□□□□□ -0.94
RETREG1-202ENST00000399793 BIRC8Q96P09 236 aa9.2□□□□□ -0.94
RETREG1-202ENST00000399793 PRPF18Q99633 342 aaKnown RBP9.2□□□□□ -0.94
RETREG1-202ENST00000399793 EPB41L4AQ9HCS5 686 aaPredicted RBP9.2□□□□□ -0.94
RETREG1-202ENST00000399793 NINJ2Q9NZG7 142 aa9.2□□□□□ -0.94
RETREG1-202ENST00000399793 FBXO9Q9UK97 447 aaPredicted RBP9.2□□□□□ -0.94
RETREG1-202ENST00000399793 NENFQ9UMX5 172 aa9.2□□□□□ -0.94
RETREG1-202ENST00000399793 FLT1P17948 1338 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 A0A088AWK7 358 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 FAM170AA1A519 330 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 TRIM64CA6NLI5 447 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 PRPF4O43172 522 aaKnown RBP eCLIP9.19□□□□□ -0.94
RETREG1-202ENST00000399793 TPPPO94811 219 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 NAT2P11245 290 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 CA4P22748 312 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 PON1P27169 355 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 GNA11P29992 359 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 TUFMP49411 452 aaKnown RBP9.19□□□□□ -0.94
RETREG1-202ENST00000399793 CDK16Q00536 496 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 PPATQ06203 517 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 NR1H3Q13133 447 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 RASGRF1Q13972 1273 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 LRP8Q14114 963 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 RASA2Q15283 850 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 LRRC41Q15345 812 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 TRIP10Q15642 601 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 ARSHQ5FYA8 562 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 SPOPLQ6IQ16 392 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 AAGABQ6PD74 315 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 IYDQ6PHW0 289 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 NLRP10Q86W26 655 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 BPHLQ86WA6 291 aaPredicted RBP9.19□□□□□ -0.94
RETREG1-202ENST00000399793 IFNL3Q8IZI9 196 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 C4orf33Q8N1A6 199 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 GUF1Q8N442 669 aaKnown RBP9.19□□□□□ -0.94
RETREG1-202ENST00000399793 ALLCQ8N6M5 410 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 TTC25Q96NG3 672 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 GPR101Q96P66 508 aaPredicted RBP9.19□□□□□ -0.94
RETREG1-202ENST00000399793 BTBD9Q96Q07 612 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 TRABDQ9H4I3 376 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 MAGEF1Q9HAY2 307 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 PARVBQ9HBI1 364 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 VTA1Q9NP79 307 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 TMOD2Q9NZR1 351 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 PLA2G4CQ9UP65 541 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 CTDP1Q9Y5B0 961 aaPredicted RBP9.19□□□□□ -0.94
RETREG1-202ENST00000399793 CHD1O14646 1710 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 ZNF532Q9HCE3 1301 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 PLEKHG3A1L390 1219 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 SOBPA7XYQ1 873 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 TOM1O60784 492 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 C6orf222P0C671 652 aaPredicted RBP9.19□□□□□ -0.94
RETREG1-202ENST00000399793 RBP3P10745 1247 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 ZNF12P17014 697 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 MZF1P28698 734 aaPredicted RBP9.19□□□□□ -0.94
RETREG1-202ENST00000399793 COILP38432 576 aaPredicted RBP9.19□□□□□ -0.94
RETREG1-202ENST00000399793 NR1H2P55055 460 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 EFTUD2Q15029 972 aaKnown RBP eCLIP9.19□□□□□ -0.94
RETREG1-202ENST00000399793 CLUL1Q15846 466 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 C11orf74Q86VG3 221 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 SIX5Q8N196 739 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.19□□□□□ -0.94
RETREG1-202ENST00000399793 SHKBP1Q8TBC3 707 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 ACTRT2Q8TDY3 377 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 DDI1Q8WTU0 396 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 PWWP2AQ96N64 755 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 STRBPQ96SI9 672 aaKnown RBP9.19□□□□□ -0.94
RETREG1-202ENST00000399793 PCDHA4Q9UN74 947 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 SSX2IPQ9Y2D8 614 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 PKD1L3Q7Z443 1732 aa9.19□□□□□ -0.94
RETREG1-202ENST00000399793 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.19□□□□□ -0.94
RETREG1-202ENST00000399793 WDR91A4D1P6 747 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 C2orf71A6NGG8 1288 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 FCHO1O14526 889 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 CYP26A1O43174 497 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 HSPA6P17066 643 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 FDFT1P37268 417 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 MYBPC1Q00872 1141 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 SNAPC2Q13487 334 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 APOFQ13790 326 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 E2F2Q14209 437 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 ALX1Q15699 326 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 PCNX4Q63HM2 1172 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 NIPAL1Q6NVV3 410 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 ZNF530Q6P9A1 599 aaPredicted RBP9.18□□□□□ -0.94
RETREG1-202ENST00000399793 RHBDF2Q6PJF5 856 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 FASTKD5Q7L8L6 764 aaKnown RBP9.18□□□□□ -0.94
RETREG1-202ENST00000399793 POU5F2Q8N7G0 328 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 GSTCDQ8NEC7 633 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 TSG101Q99816 390 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 CCDC77Q9BR77 488 aa9.18□□□□□ -0.94
RETREG1-202ENST00000399793 TMEM120AQ9BXJ8 343 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms