RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 ANKRD35Q8N283 1001 aa24.53■■□□□ 1.52
RABGGTA-202ENST00000399409 CCDC89Q8N998 374 aa24.53■■□□□ 1.52
RABGGTA-202ENST00000399409 NEU2Q9Y3R4 380 aa24.53■■□□□ 1.52
RABGGTA-202ENST00000399409 BRCA1P38398 1863 aaKnown RBP24.53■■□□□ 1.52
RABGGTA-202ENST00000399409 GOLGA6L7A0A1B0GV03 622 aa24.52■■□□□ 1.52
RABGGTA-202ENST00000399409 TCEA3O75764 348 aa24.52■■□□□ 1.52
RABGGTA-202ENST00000399409 ZNF132P52740 706 aa24.52■■□□□ 1.52
RABGGTA-202ENST00000399409 TAS2R40P59535 323 aa24.52■■□□□ 1.52
RABGGTA-202ENST00000399409 LMNB2Q03252 620 aa24.52■■□□□ 1.52
RABGGTA-202ENST00000399409 ZBTB41Q5SVQ8 909 aa24.52■■□□□ 1.52
RABGGTA-202ENST00000399409 SEPT14Q6ZU15 432 aa24.52■■□□□ 1.52
RABGGTA-202ENST00000399409 BRSK2Q8IWQ3 736 aa24.52■■□□□ 1.52
RABGGTA-202ENST00000399409 UBR7Q8N806 425 aa24.52■■□□□ 1.52
RABGGTA-202ENST00000399409 R3HDM2Q9Y2K5 976 aaKnown RBP24.52■■□□□ 1.52
RABGGTA-202ENST00000399409 TLR3O15455 904 aaKnown RBP24.52■■□□□ 1.52
RABGGTA-202ENST00000399409 CFHP08603 1231 aa24.52■■□□□ 1.52
RABGGTA-202ENST00000399409 ALDH5A1P51649 535 aaPredicted RBP24.52■■□□□ 1.52
RABGGTA-202ENST00000399409 EFNA5P52803 228 aa24.52■■□□□ 1.52
RABGGTA-202ENST00000399409 LACTB2Q53H82 288 aaPredicted RBP24.52■■□□□ 1.52
RABGGTA-202ENST00000399409 C2CD6Q53TS8 623 aa24.52■■□□□ 1.52
RABGGTA-202ENST00000399409 PRAMEF18Q5VWM3 479 aa24.52■■□□□ 1.52
RABGGTA-202ENST00000399409 ZNF365Q70YC5 407 aa24.52■■□□□ 1.52
RABGGTA-202ENST00000399409 CCDC197Q8NCU1 140 aa24.52■■□□□ 1.52
RABGGTA-202ENST00000399409 OR5B17Q8NGF7 314 aa24.52■■□□□ 1.52
RABGGTA-202ENST00000399409 DDX23Q9BUQ8 820 aaKnown RBP24.52■■□□□ 1.52
RABGGTA-202ENST00000399409 FOXP3Q9BZS1 431 aa24.52■■□□□ 1.52
RABGGTA-202ENST00000399409 GSTTP1A0A1W2PQM5 241 aa24.51■■□□□ 1.51
RABGGTA-202ENST00000399409 CHKAP35790 457 aa24.51■■□□□ 1.51
RABGGTA-202ENST00000399409 CAPSQ13938 189 aa24.51■■□□□ 1.51
RABGGTA-202ENST00000399409 WDR49Q8IV35 697 aa24.51■■□□□ 1.51
RABGGTA-202ENST00000399409 SUGP1Q8IWZ8 645 aaKnown RBP24.51■■□□□ 1.51
RABGGTA-202ENST00000399409 IPO4Q8TEX9 1081 aaKnown RBP24.51■■□□□ 1.51
RABGGTA-202ENST00000399409 ACSL3O95573 720 aa24.51■■□□□ 1.51
RABGGTA-202ENST00000399409 LSM8O95777 96 aaKnown RBP24.51■■□□□ 1.51
RABGGTA-202ENST00000399409 CALB1P05937 261 aa24.51■■□□□ 1.51
RABGGTA-202ENST00000399409 CNTN2Q02246 1040 aa24.51■■□□□ 1.51
RABGGTA-202ENST00000399409 TAX1BP1Q86VP1 789 aa24.51■■□□□ 1.51
RABGGTA-202ENST00000399409 RCOR2Q8IZ40 523 aa24.51■■□□□ 1.51
RABGGTA-202ENST00000399409 HEMGNQ9BXL5 484 aa24.51■■□□□ 1.51
RABGGTA-202ENST00000399409 NSRP1Q9H0G5 558 aaKnown RBP24.51■■□□□ 1.51
RABGGTA-202ENST00000399409 MAFO75444 373 aaPredicted RBP24.5■■□□□ 1.51
RABGGTA-202ENST00000399409 UBA1P22314 1058 aaKnown RBP24.5■■□□□ 1.51
RABGGTA-202ENST00000399409 MMP8P22894 467 aa24.5■■□□□ 1.51
RABGGTA-202ENST00000399409 NEDD9Q14511 834 aa24.5■■□□□ 1.51
RABGGTA-202ENST00000399409 CNGA2Q16280 664 aa24.5■■□□□ 1.51
RABGGTA-202ENST00000399409 EXOC3L1Q86VI1 746 aa24.5■■□□□ 1.51
RABGGTA-202ENST00000399409 RELL1Q8IUW5 271 aa24.5■■□□□ 1.51
RABGGTA-202ENST00000399409 ANKS4BQ8N8V4 417 aa24.5■■□□□ 1.51
RABGGTA-202ENST00000399409 CCHCR1Q8TD31 782 aa24.5■■□□□ 1.51
RABGGTA-202ENST00000399409 ZNF606Q8WXB4 792 aa24.5■■□□□ 1.51
RABGGTA-202ENST00000399409 RBM41Q96IZ5 413 aaKnown RBP24.5■■□□□ 1.51
RABGGTA-202ENST00000399409 PCYT2Q99447 389 aa24.5■■□□□ 1.51
RABGGTA-202ENST00000399409 KDM4CQ9H3R0 1056 aa24.5■■□□□ 1.51
RABGGTA-202ENST00000399409 FZD1Q9UP38 647 aa24.5■■□□□ 1.51
RABGGTA-202ENST00000399409 FARP2O94887 1054 aaPredicted RBP24.5■■□□□ 1.51
RABGGTA-202ENST00000399409 GHRP10912 638 aa24.5■■□□□ 1.51
RABGGTA-202ENST00000399409 SURF1Q15526 300 aa24.5■■□□□ 1.51
RABGGTA-202ENST00000399409 FBXW10Q5XX13 1052 aa24.5■■□□□ 1.51
RABGGTA-202ENST00000399409 CCDC13Q8IYE1 715 aa24.5■■□□□ 1.51
RABGGTA-202ENST00000399409 ASS1P00966 412 aaKnown RBP24.49■■□□□ 1.51
RABGGTA-202ENST00000399409 STAT5BP51692 787 aa24.49■■□□□ 1.51
RABGGTA-202ENST00000399409 ITIH4Q14624 930 aa24.49■■□□□ 1.51
RABGGTA-202ENST00000399409 TRIP13Q15645 432 aaPredicted RBP24.49■■□□□ 1.51
RABGGTA-202ENST00000399409 LONRF1Q17RB8 773 aa24.49■■□□□ 1.51
RABGGTA-202ENST00000399409 LRRC38Q5VT99 294 aa24.49■■□□□ 1.51
RABGGTA-202ENST00000399409 PIGWQ7Z7B1 504 aa24.49■■□□□ 1.51
RABGGTA-202ENST00000399409 DEFB132Q7Z7B7 95 aa24.49■■□□□ 1.51
RABGGTA-202ENST00000399409 FAM167AQ96KS9 214 aa24.49■■□□□ 1.51
RABGGTA-202ENST00000399409 MRPL4Q9BYD3 311 aaKnown RBP24.49■■□□□ 1.51
RABGGTA-202ENST00000399409 OSBPL7Q9BZF2 842 aa24.49■■□□□ 1.51
RABGGTA-202ENST00000399409 USTQ9Y2C2 406 aa24.49■■□□□ 1.51
RABGGTA-202ENST00000399409 EDN1P05305 212 aa24.49■■□□□ 1.51
RABGGTA-202ENST00000399409 HNRNPH1P31943 449 aaKnown RBP24.49■■□□□ 1.51
RABGGTA-202ENST00000399409 SSR1P43307 286 aaKnown RBP24.49■■□□□ 1.51
RABGGTA-202ENST00000399409 ANKRD20A8PQ5CZ79 823 aa24.49■■□□□ 1.51
RABGGTA-202ENST00000399409 PRMT1Q99873 361 aaKnown RBP24.49■■□□□ 1.51
RABGGTA-202ENST00000399409 CCDC113Q9H0I3 377 aa24.49■■□□□ 1.51
RABGGTA-202ENST00000399409 TMEM191CA6NGB0 347 aa24.48■■□□□ 1.51
RABGGTA-202ENST00000399409 TOM1L1O75674 476 aa24.48■■□□□ 1.51
RABGGTA-202ENST00000399409 TMEM191BP0C7N4 346 aa24.48■■□□□ 1.51
RABGGTA-202ENST00000399409 EDNRBP24530 442 aa24.48■■□□□ 1.51
RABGGTA-202ENST00000399409 TAP1Q03518 808 aa24.48■■□□□ 1.51
RABGGTA-202ENST00000399409 FSTL1Q12841 308 aa24.48■■□□□ 1.51
RABGGTA-202ENST00000399409 POTEAQ6S8J7 498 aa24.48■■□□□ 1.51
RABGGTA-202ENST00000399409 LBX2Q6XYB7 198 aa24.48■■□□□ 1.51
RABGGTA-202ENST00000399409 RIOX2Q8IUF8 465 aa24.48■■□□□ 1.51
RABGGTA-202ENST00000399409 ARHGEF2Q92974 986 aaKnown RBP24.48■■□□□ 1.51
RABGGTA-202ENST00000399409 ZNF518BQ9C0D4 1074 aa24.48■■□□□ 1.51
RABGGTA-202ENST00000399409 NINJ2Q9NZG7 142 aa24.48■■□□□ 1.51
RABGGTA-202ENST00000399409 SAMD15Q9P1V8 674 aa24.48■■□□□ 1.51
RABGGTA-202ENST00000399409 O00370 1275 aa24.47■■□□□ 1.51
RABGGTA-202ENST00000399409 TGFB3P10600 412 aa24.47■■□□□ 1.51
RABGGTA-202ENST00000399409 MCL1Q07820 350 aa24.47■■□□□ 1.51
RABGGTA-202ENST00000399409 NFX1Q12986 1120 aaKnown RBP24.47■■□□□ 1.51
RABGGTA-202ENST00000399409 IER5Q5VY09 327 aa24.47■■□□□ 1.51
RABGGTA-202ENST00000399409 DRICH1Q6PGQ1 229 aaPredicted RBP24.47■■□□□ 1.51
RABGGTA-202ENST00000399409 LRRC34Q8IZ02 419 aa24.47■■□□□ 1.51
RABGGTA-202ENST00000399409 CCT6BQ92526 530 aa24.47■■□□□ 1.51
RABGGTA-202ENST00000399409 CCDC77Q9BR77 488 aa24.47■■□□□ 1.51
RABGGTA-202ENST00000399409 CD58P19256 250 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms