RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 RIOX1Q9H6W3 641 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 TRPC5Q9UL62 973 aaPredicted RBP11.62□□□□□ -0.55
HPS4-202ENST00000398145 AKT3Q9Y243 479 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 M0QYV0 167 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 SNUPNO95149 360 aaKnown RBP11.62□□□□□ -0.55
HPS4-202ENST00000398145 CASP2P42575 452 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 DSG1Q02413 1049 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 SYCP2LQ5T4T6 812 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 C16orf87Q6PH81 154 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 LRRC55Q6ZSA7 311 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 TRIM67Q6ZTA4 783 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 RIT2Q99578 217 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 NUDT12Q9BQG2 462 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 RAVER2Q9HCJ3 691 aaKnown RBP11.62□□□□□ -0.55
HPS4-202ENST00000398145 LRCH1Q9Y2L9 728 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 ZNF711Q9Y462 761 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 KCNN4O15554 427 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 CYP11B1P15538 503 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 STMN1P16949 149 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 DRD4P21917 467 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 CALB2P22676 271 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 KLRK1P26718 216 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 CNGA1P29973 690 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 PRKCIP41743 596 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 SERPINB9P50453 376 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 NDUFAF2Q8N183 169 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 C1orf131Q8NDD1 294 aaKnown RBP11.62□□□□□ -0.55
HPS4-202ENST00000398145 AGR3Q8TD06 166 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 SLC20A1Q8WUM9 679 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 MTRQ99707 1265 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 IL17RBQ9NRM6 502 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 PCMTD2Q9NV79 361 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 WDR35Q9P2L0 1181 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 PFDN6O15212 129 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 ACOT2P49753 483 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 FAM182BQ5T319 152 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 LCA5Q86VQ0 697 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 LRRC6Q86X45 466 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 OLFML3Q9NRN5 406 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 GTSE1Q9NYZ3 720 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 PRR12Q9ULL5 1215 aa11.62□□□□□ -0.55
HPS4-202ENST00000398145 LOC100653049A0A140TA62 436 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 E7ENQ6 273 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 PSTPIP1O43586 416 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 DGAT1O75907 488 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 KRT34O76011 436 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 TAC1P20366 129 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 AP1B1Q10567 949 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 CCNG2Q16589 344 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 TMEM119Q4V9L6 283 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 SPATA18Q8TC71 538 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 NSUN6Q8TEA1 469 aaKnown RBP11.61□□□□□ -0.55
HPS4-202ENST00000398145 FAM53CQ9NYF3 392 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 NDUFA13Q9P0J0 144 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 WARS2Q9UGM6 360 aaKnown RBP11.61□□□□□ -0.55
HPS4-202ENST00000398145 ORC6Q9Y5N6 252 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 TRIM49D1C9J1S8 452 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 AGPSO00116 658 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 HLA-DRAP01903 254 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 PYGMP11217 842 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 VEGFAP15692 232 aaPredicted RBP11.61□□□□□ -0.55
HPS4-202ENST00000398145 GPC3P51654 580 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 ACTR2P61160 394 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 CYLC2Q14093 348 aaPredicted RBP11.61□□□□□ -0.55
HPS4-202ENST00000398145 ZNF568Q3ZCX4 644 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 SNX30Q5VWJ9 437 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 VGLL2Q8N8G2 317 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 STK32AQ8WU08 396 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 PI4K2AQ9BTU6 479 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 SLC24A2Q9UI40 661 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 AGLP35573 1532 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 NCOA4Q13772 614 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 TAF12Q16514 161 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 IL17AQ16552 155 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 DHX38Q92620 1227 aaKnown RBP11.61□□□□□ -0.55
HPS4-202ENST00000398145 ING2Q9H160 280 aa11.61□□□□□ -0.55
HPS4-202ENST00000398145 CYTH3O43739 400 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 RAD17O75943 681 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 RARAP10276 462 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 OCA2Q04671 838 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 KIF19Q2TAC6 998 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 TMEM259Q4ZIN3 620 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 ZNF720Q7Z2F6 126 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 KCNK18Q7Z418 384 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 SIX6OS1Q8N1H7 587 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 SCFD2Q8WU76 684 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 PSPC1Q8WXF1 523 aaKnown RBP11.6□□□□□ -0.55
HPS4-202ENST00000398145 DHX35Q9H5Z1 703 aaKnown RBP11.6□□□□□ -0.55
HPS4-202ENST00000398145 MEGF6O75095 1541 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 OPLAHO14841 1288 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 RRM1P23921 792 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 SESN2P58004 480 aaPredicted RBP11.6□□□□□ -0.55
HPS4-202ENST00000398145 IL1RL1Q01638 556 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 EFTUD2Q15029 972 aaKnown RBP eCLIP11.6□□□□□ -0.55
HPS4-202ENST00000398145 CHI3L2Q15782 390 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 TBCCQ15814 346 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 OR6B3Q8NGW1 331 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 TBC1D16Q8TBP0 767 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 PRCCQ92733 491 aaPredicted RBP11.6□□□□□ -0.55
HPS4-202ENST00000398145 EME1Q96AY2 570 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms