RNA–Protein interactions for RNA: ENST00000398073.6

CTDSP2-201, Transcript of CTD small phosphatase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP2, Length 4,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-201ENST00000398073 SPDYCQ5MJ68 293 aa17.22■□□□□ 0.35
CTDSP2-201ENST00000398073 CBWD2Q8IUF1 395 aa17.22■□□□□ 0.35
CTDSP2-201ENST00000398073 BEST2Q8NFU1 509 aa17.22■□□□□ 0.35
CTDSP2-201ENST00000398073 RDM1Q8NG50 284 aa17.22■□□□□ 0.35
CTDSP2-201ENST00000398073 RSAD1Q9HA92 442 aa17.22■□□□□ 0.35
CTDSP2-201ENST00000398073 REXO2Q9Y3B8 237 aaKnown RBP17.22■□□□□ 0.35
CTDSP2-201ENST00000398073 UBOX5O94941 541 aa17.22■□□□□ 0.35
CTDSP2-201ENST00000398073 KCNMA1Q12791 1236 aa17.22■□□□□ 0.35
CTDSP2-201ENST00000398073 TEDDM1Q5T9Z0 273 aa17.22■□□□□ 0.35
CTDSP2-201ENST00000398073 LRRC55Q6ZSA7 311 aa17.22■□□□□ 0.35
CTDSP2-201ENST00000398073 SLC20A1Q8WUM9 679 aa17.22■□□□□ 0.35
CTDSP2-201ENST00000398073 MTBPQ96DY7 904 aa17.22■□□□□ 0.35
CTDSP2-201ENST00000398073 NSL1Q96IY1 281 aa17.22■□□□□ 0.35
CTDSP2-201ENST00000398073 TRIM15Q9C019 465 aa17.22■□□□□ 0.35
CTDSP2-201ENST00000398073 TSPYL2Q9H2G4 693 aaPredicted RBP17.22■□□□□ 0.35
CTDSP2-201ENST00000398073 DCCP43146 1447 aa17.22■□□□□ 0.35
CTDSP2-201ENST00000398073 TRAPPC3O43617 180 aa17.22■□□□□ 0.35
CTDSP2-201ENST00000398073 ZC3H11AO75152 810 aaKnown RBP eCLIP17.22■□□□□ 0.352e-9■■■□□ 16.8
CTDSP2-201ENST00000398073 EMC2Q15006 297 aa17.22■□□□□ 0.35
CTDSP2-201ENST00000398073 RARS2Q5T160 578 aaKnown RBP17.22■□□□□ 0.35
CTDSP2-201ENST00000398073 SPATA18Q8TC71 538 aa17.22■□□□□ 0.35
CTDSP2-201ENST00000398073 SCG3Q8WXD2 468 aaKnown RBP17.22■□□□□ 0.35
CTDSP2-201ENST00000398073 GMCL1Q96IK5 515 aa17.22■□□□□ 0.35
CTDSP2-201ENST00000398073 CREB3O43889 395 aa17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 ANP32DO95626 131 aa17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 PRKCIP41743 596 aa17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 ACTR2P61160 394 aa17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 NBPF20Q3BBV1 942 aa17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 XRRA1Q6P2D8 792 aa17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 KCNK18Q7Z418 384 aa17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 YTHDF3Q7Z739 585 aaKnown RBP17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 FRMD8Q9BZ67 464 aaPredicted RBP17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 TCHHQ07283 1943 aa17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 B2RBV5 119 aa17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 WEE2P0C1S8 567 aa17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 KRT4P19013 534 aa17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 GTF2H1P32780 548 aa17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 PRKCEQ02156 737 aa17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 IL17AQ16552 155 aa17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 CCNYL1Q8N7R7 359 aa17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 ATP6V1E2Q96A05 226 aa17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 TNS2Q63HR2 1409 aa17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 CUL3Q13618 768 aa17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 SLC30A9Q6PML9 568 aa17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 NIF3L1Q9GZT8 377 aa17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 RIPK2O43353 540 aa17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 HUS1O60921 280 aa17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 ZNF189O75820 626 aaPredicted RBP17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 S100BP04271 92 aaPredicted RBP17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 VEGFAP15692 232 aaPredicted RBP17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 TARSP26639 723 aaKnown RBP17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 MORF4L2Q15014 288 aa17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 STILQ15468 1287 aa17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 GPAT2Q6NUI2 795 aa17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 TEX2Q8IWB9 1127 aa17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 CCDC138Q96M89 665 aa17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 SLC12A6Q9UHW9 1150 aa17.21■□□□□ 0.35
CTDSP2-201ENST00000398073 ARHGAP10A1A4S6 786 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 H3BRJ5 948 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 EPHB6O15197 1021 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 PHEXP78562 749 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 AP1B1Q10567 949 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 GRM1Q13255 1194 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 MED21Q13503 144 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 BAP1Q92560 729 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 ABTB1Q969K4 478 aaPredicted RBP17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 FAM49AQ9H0Q0 323 aaPredicted RBP17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 ANLNQ9NQW6 1124 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 GEMIN8Q9NWZ8 242 aaKnown RBP17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 GTSE1Q9NYZ3 720 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 NFIAQ12857 509 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 KYAT1Q16773 422 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 ITPRIPL1Q6GPH6 555 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 RSPH3Q86UC2 560 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 TEX13BQ9BXU2 312 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 MARCOQ9UEW3 520 aaPredicted RBP17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 BCL9O00512 1426 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 ARHGEF37A1IGU5 675 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 KCNA3P22001 575 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 CUL2Q13617 745 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 CCNG2Q16589 344 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 EFHC2Q5JST6 749 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 TMEM154Q6P9G4 183 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 NLRP9Q7RTR0 991 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 TMC2Q8TDI7 906 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 ZNF668Q96K58 619 aaPredicted RBP17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 GNGT2O14610 69 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 CHEK2O96017 543 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 EEF1B2P24534 225 aaKnown RBP17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 VHLP40337 213 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 PAPOLAP51003 745 aaKnown RBP17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 MXD4Q14582 209 aaPredicted RBP17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 NRBF2Q96F24 287 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 THTPAQ9BU02 230 aa17.2■□□□□ 0.34
CTDSP2-201ENST00000398073 KLHL2O95198 593 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 RRM1P23921 792 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 FUT2Q10981 343 aa17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 EAPPQ56P03 285 aaPredicted RBP17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 RWDD4Q6NW29 188 aaKnown RBP17.19■□□□□ 0.34
CTDSP2-201ENST00000398073 CATSPER1Q8NEC5 780 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms