RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 UBN1Q9NPG3 1134 aa20.89■□□□□ 0.94
PDLIM2-205ENST00000397761 NOCTQ9UK39 431 aaKnown RBP20.89■□□□□ 0.94
PDLIM2-205ENST00000397761 FNDC1Q4ZHG4 1894 aaPredicted RBP20.88■□□□□ 0.93
PDLIM2-205ENST00000397761 A0A087X0T9 212 aa20.88■□□□□ 0.93
PDLIM2-205ENST00000397761 GOLGA6L9A6NEM1 432 aa20.88■□□□□ 0.93
PDLIM2-205ENST00000397761 ARL5CA6NH57 179 aa20.88■□□□□ 0.93
PDLIM2-205ENST00000397761 EOMESO95936 686 aa20.88■□□□□ 0.93
PDLIM2-205ENST00000397761 FAM228BP0C875 321 aa20.88■□□□□ 0.93
PDLIM2-205ENST00000397761 ZNF132P52740 706 aa20.88■□□□□ 0.93
PDLIM2-205ENST00000397761 SOX4Q06945 474 aaPredicted RBP20.88■□□□□ 0.93
PDLIM2-205ENST00000397761 C9orf57Q5W0N0 161 aa20.88■□□□□ 0.93
PDLIM2-205ENST00000397761 EPS8L1Q8TE68 723 aa20.88■□□□□ 0.93
PDLIM2-205ENST00000397761 LPPQ93052 612 aa20.88■□□□□ 0.93
PDLIM2-205ENST00000397761 GAD1Q99259 594 aa20.88■□□□□ 0.93
PDLIM2-205ENST00000397761 SLC38A7Q9NVC3 462 aa20.88■□□□□ 0.93
PDLIM2-205ENST00000397761 TRMT1Q9NXH9 659 aaKnown RBP20.88■□□□□ 0.93
PDLIM2-205ENST00000397761 PDE4DIPQ5VU43 2346 aa20.88■□□□□ 0.93
PDLIM2-205ENST00000397761 CYP26A1O43174 497 aa20.88■□□□□ 0.93
PDLIM2-205ENST00000397761 MLH1P40692 756 aa20.88■□□□□ 0.93
PDLIM2-205ENST00000397761 LRRC26Q2I0M4 334 aa20.88■□□□□ 0.93
PDLIM2-205ENST00000397761 WDR72Q3MJ13 1102 aa20.88■□□□□ 0.93
PDLIM2-205ENST00000397761 NYAP1Q6ZVC0 841 aa20.88■□□□□ 0.93
PDLIM2-205ENST00000397761 NECAB2Q7Z6G3 386 aa20.88■□□□□ 0.93
PDLIM2-205ENST00000397761 VPS36Q86VN1 386 aa20.88■□□□□ 0.93
PDLIM2-205ENST00000397761 RSAD1Q9HA92 442 aa20.88■□□□□ 0.93
PDLIM2-205ENST00000397761 CYP3A43Q9HB55 503 aa20.88■□□□□ 0.93
PDLIM2-205ENST00000397761 ADAMTS1Q9UHI8 967 aa20.88■□□□□ 0.93
PDLIM2-205ENST00000397761 ATP8B3O60423 1300 aa20.87■□□□□ 0.93
PDLIM2-205ENST00000397761 DDX3XO00571 662 aaKnown RBP eCLIP20.87■□□□□ 0.939e-11■■■■■ 33.8
PDLIM2-205ENST00000397761 IPO7O95373 1038 aaKnown RBP20.87■□□□□ 0.93
PDLIM2-205ENST00000397761 USP8P40818 1118 aa20.87■□□□□ 0.93
PDLIM2-205ENST00000397761 YWHAEP62258 255 aaKnown RBP20.87■□□□□ 0.93
PDLIM2-205ENST00000397761 GFPT1Q06210 699 aaPredicted RBP20.87■□□□□ 0.93
PDLIM2-205ENST00000397761 MYO1EQ12965 1108 aa20.87■□□□□ 0.93
PDLIM2-205ENST00000397761 SPA17Q15506 151 aa20.87■□□□□ 0.93
PDLIM2-205ENST00000397761 UBE2Q1Q7Z7E8 422 aa20.87■□□□□ 0.93
PDLIM2-205ENST00000397761 DBF4BQ8NFT6 615 aa20.87■□□□□ 0.93
PDLIM2-205ENST00000397761 SEPT8Q92599 483 aa20.87■□□□□ 0.93
PDLIM2-205ENST00000397761 POLIQ9UNA4 740 aa20.87■□□□□ 0.93
PDLIM2-205ENST00000397761 R3HCC1Q9Y3T6 440 aaKnown RBP20.87■□□□□ 0.93
PDLIM2-205ENST00000397761 PPEF2O14830 753 aa20.86■□□□□ 0.93
PDLIM2-205ENST00000397761 CLTBP09497 229 aa20.86■□□□□ 0.93
PDLIM2-205ENST00000397761 P4HA1P13674 534 aa20.86■□□□□ 0.93
PDLIM2-205ENST00000397761 CYP11B1P15538 503 aa20.86■□□□□ 0.93
PDLIM2-205ENST00000397761 AFF1P51825 1210 aaKnown RBP20.86■□□□□ 0.93
PDLIM2-205ENST00000397761 BPIFB4P59827 614 aa20.86■□□□□ 0.93
PDLIM2-205ENST00000397761 CYP27A1Q02318 531 aa20.86■□□□□ 0.93
PDLIM2-205ENST00000397761 MLLT1Q03111 559 aaPredicted RBP20.86■□□□□ 0.93
PDLIM2-205ENST00000397761 NOP9Q86U38 636 aaKnown RBP20.86■□□□□ 0.93
PDLIM2-205ENST00000397761 SLC47A2Q86VL8 602 aa20.86■□□□□ 0.93
PDLIM2-205ENST00000397761 DDX1Q92499 740 aaKnown RBP20.86■□□□□ 0.93
PDLIM2-205ENST00000397761 RPS6KC1Q96S38 1066 aa20.86■□□□□ 0.93
PDLIM2-205ENST00000397761 AGPAT1Q99943 283 aa20.86■□□□□ 0.93
PDLIM2-205ENST00000397761 ELAC1Q9H777 363 aaKnown RBP20.86■□□□□ 0.93
PDLIM2-205ENST00000397761 RRAGDQ9NQL2 400 aaPredicted RBP20.86■□□□□ 0.93
PDLIM2-205ENST00000397761 CISHQ9NSE2 258 aa20.86■□□□□ 0.93
PDLIM2-205ENST00000397761 MIOSQ9NXC5 875 aa20.86■□□□□ 0.93
PDLIM2-205ENST00000397761 NAGPAQ9UK23 515 aa20.86■□□□□ 0.93
PDLIM2-205ENST00000397761 ATP11BQ9Y2G3 1177 aa20.86■□□□□ 0.93
PDLIM2-205ENST00000397761 OFD1O75665 1012 aa20.85■□□□□ 0.93
PDLIM2-205ENST00000397761 THP07101 528 aa20.85■□□□□ 0.93
PDLIM2-205ENST00000397761 KRT5P13647 590 aa20.85■□□□□ 0.93
PDLIM2-205ENST00000397761 CHRNB2P17787 502 aa20.85■□□□□ 0.93
PDLIM2-205ENST00000397761 CYP2C18P33260 490 aa20.85■□□□□ 0.93
PDLIM2-205ENST00000397761 PNPLA4P41247 253 aa20.85■□□□□ 0.93
PDLIM2-205ENST00000397761 ARHGAP25P42331 645 aa20.85■□□□□ 0.93
PDLIM2-205ENST00000397761 VAV2P52735 878 aa20.85■□□□□ 0.93
PDLIM2-205ENST00000397761 C10orf76Q5T2E6 689 aa20.85■□□□□ 0.93
PDLIM2-205ENST00000397761 LNX1Q8TBB1 728 aaPredicted RBP20.85■□□□□ 0.93
PDLIM2-205ENST00000397761 SLC20A1Q8WUM9 679 aa20.85■□□□□ 0.93
PDLIM2-205ENST00000397761 ZNF560Q96MR9 790 aa20.85■□□□□ 0.93
PDLIM2-205ENST00000397761 RNF19AQ9NV58 838 aa20.85■□□□□ 0.93
PDLIM2-205ENST00000397761 GDAP2Q9NXN4 497 aa20.85■□□□□ 0.93
PDLIM2-205ENST00000397761 NXF1Q9UBU9 619 aaKnown RBP20.85■□□□□ 0.93
PDLIM2-205ENST00000397761 PCDHB4Q9Y5E5 795 aa20.85■□□□□ 0.93
PDLIM2-205ENST00000397761 PCDHA13Q9Y5I0 950 aa20.85■□□□□ 0.93
PDLIM2-205ENST00000397761 TSC2P49815 1807 aa20.85■□□□□ 0.93
PDLIM2-205ENST00000397761 ENPP3O14638 875 aa20.84■□□□□ 0.93
PDLIM2-205ENST00000397761 PJA2O43164 708 aa20.84■□□□□ 0.93
PDLIM2-205ENST00000397761 CDR2Q01850 454 aa20.84■□□□□ 0.93
PDLIM2-205ENST00000397761 INCA1Q0VD86 236 aa20.84■□□□□ 0.93
PDLIM2-205ENST00000397761 TMEM270Q6UE05 265 aa20.84■□□□□ 0.93
PDLIM2-205ENST00000397761 LIMS2Q7Z4I7 341 aa20.84■□□□□ 0.93
PDLIM2-205ENST00000397761 ZNF677Q86XU0 584 aa20.84■□□□□ 0.93
PDLIM2-205ENST00000397761 CRIPAKQ8N1N5 446 aa20.84■□□□□ 0.93
PDLIM2-205ENST00000397761 TTC39CQ8N584 583 aa20.84■□□□□ 0.93
PDLIM2-205ENST00000397761 RBBP8NLQ8NC74 664 aaPredicted RBP20.84■□□□□ 0.93
PDLIM2-205ENST00000397761 SCLYQ96I15 445 aa20.84■□□□□ 0.93
PDLIM2-205ENST00000397761 PPP1R12CQ9BZL4 782 aa20.84■□□□□ 0.93
PDLIM2-205ENST00000397761 SDCBP2Q9H190 292 aa20.84■□□□□ 0.93
PDLIM2-205ENST00000397761 ACP6Q9NPH0 428 aa20.84■□□□□ 0.93
PDLIM2-205ENST00000397761 TMEM161AQ9NX61 479 aa20.84■□□□□ 0.93
PDLIM2-205ENST00000397761 A0A0U1RQJ8 604 aa20.83■□□□□ 0.93
PDLIM2-205ENST00000397761 KIAA0355O15063 1070 aa20.83■□□□□ 0.93
PDLIM2-205ENST00000397761 WEE2P0C1S8 567 aa20.83■□□□□ 0.93
PDLIM2-205ENST00000397761 RFC2P35250 354 aa20.83■□□□□ 0.93
PDLIM2-205ENST00000397761 PDE6CP51160 858 aa20.83■□□□□ 0.93
PDLIM2-205ENST00000397761 SCNN1GP51170 649 aa20.83■□□□□ 0.93
PDLIM2-205ENST00000397761 GRIK3Q13003 919 aa20.83■□□□□ 0.93
PDLIM2-205ENST00000397761 TCTN1Q2MV58 587 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms